Zobrazeno 1 - 8
of 8
pro vyhledávání: '"Sabeeha Hasnain"'
Autor:
Sabeeha Hasnain, Christopher L McClendon, Monica T Hsu, Matthew P Jacobson, Pradipta Bandyopadhyay
Publikováno v:
PLoS ONE, Vol 9, Iss 9, p e106466 (2014)
A new coarse-grained model of the E. coli cytoplasm is developed by describing the proteins of the cytoplasm as flexible units consisting of one or more spheres that follow Brownian dynamics (BD), with hydrodynamic interactions (HI) accounted for by
Externí odkaz:
https://doaj.org/article/2214fb70256d4962b71009c5610d201b
Substantial increase in the temporal resolution of the stepping of dimeric molec- ular motors is possible by tracking the position of a large gold nanoparticle (GNP) attached to a labeled site on one of the heads. This technique was used to measure t
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::69116a37982985c5130b38c802ff14d5
https://doi.org/10.1101/2020.02.05.935791
https://doi.org/10.1101/2020.02.05.935791
Publikováno v:
Encyclopedia of Bioinformatics and Computational Biology (2)
Proteins are known to perform most of the biological functions in living systems of which binding to their specific targets is one of the most crucial ones. This group of biomolecular interactions stands out in its importance on account of its centra
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::c60a294540b2f50acf6d25993ffe4818
https://doi.org/10.1016/b978-0-12-809633-8.20217-3
https://doi.org/10.1016/b978-0-12-809633-8.20217-3
Publikováno v:
Chemical Physics Letters. 591:253-258
The variation of the diffusion coefficient (D) of DNA molecules with their size and topology is an important problem. Experiments have elucidated key scaling factors for diffusion for DNA molecules in the size range of 5.9–287.1 kilo base pairs. In
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::a2410e74576aa1e12a22700fbf3483c0
https://doi.org/10.1016/j.cplett.2013.11.029
https://doi.org/10.1016/j.cplett.2013.11.029
Publikováno v:
International Journal of Modern Physics B. 32:1850193
We study memory-based random walk models to understand diffusive motion in crowded heterogeneous environments. The models considered are non-Markovian as the current move of the random walk is determined by randomly selecting a move from history. At
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a2b224698c28106c4fc6297502b0b3d7
https://doi.org/10.1142/s021797921850193x
https://doi.org/10.1142/s021797921850193x
Publikováno v:
The Journal of chemical physics. 143(11)
Subdiffusion in crowded environment such as movement of macromolecule in a living cell has often been observed experimentally. The primary reason for subdiffusion is volume exclusion by the crowder molecules. However, other effects such as hydrodynam
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f16122b30987715d2bad974d855d27fc
https://pubmed.ncbi.nlm.nih.gov/26395684
https://pubmed.ncbi.nlm.nih.gov/26395684
Autor:
Christopher L. McClendon, Pradipta Bandyopadhyay, Matthew P. Jacobson, Sabeeha Hasnain, Monica Tremont Hsu
Publikováno v:
Biophysical Journal. 108:116a-117a
The dynamics of proteins is essential for the quantification of various cellular processes like rates of enzymatic reactions, signal transduction and protein association reactions. However, understanding the structure and dynamics of macromolecules i
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b21d21541989cb4f056640cc06041402
https://doi.org/10.1016/j.bpj.2014.11.654
https://doi.org/10.1016/j.bpj.2014.11.654
Autor:
Monica T. Hsu, Sabeeha Hasnain, Matthew P. Jacobson, Pradipta Bandyopadhyay, Christopher L. McClendon
Publikováno v:
PLoS ONE, Vol 9, Iss 9, p e106466 (2014)
PLoS ONE
PLoS ONE
A new coarse-grained model of the E. coli cytoplasm is developed by describing the proteins of the cytoplasm as flexible units consisting of one or more spheres that follow Brownian dynamics (BD), with hydrodynamic interactions (HI) accounted for by
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b6247be312c2bfba3646a5a753d2a8b3
https://doi.org/10.1371/journal.pone.0106466
https://doi.org/10.1371/journal.pone.0106466