Zobrazeno 1 - 7
of 7
pro vyhledávání: '"Sabareesh Subramaniam"'
Autor:
Alessandro Senes, Feng He, Xuejun C. Zhang, Justin Kale, Jingzhen Ding, Suzanne M. Lapolla, Samson G.F. Condon, Bo Huang, Zhi Zhang, Jianing Li, Sabareesh Subramaniam, David W. Andrews, Franklin A. Hays, Jialing Lin, Hetal Brahmbhatt, Chenyi Liao
Publikováno v:
The EMBO Journal. 35:208-236
Pro‐apoptotic Bax induces mitochondrial outer membrane permeabilization (MOMP) by forming oligomers through a largely undefined process. Using site‐specific disulfide crosslinking, compartment‐specific chemical labeling, and mutational analysis
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::22c69ebeedff4b8990dc41c88e1d5401
https://doi.org/10.15252/embj.201591552
https://doi.org/10.15252/embj.201591552
Publikováno v:
Proteins: Structure, Function, and Bioinformatics. 82:3177-3187
Side chain optimization is an integral component of many protein modeling applications. In these applications, the conformational freedom of the side chains is often explored using libraries of discrete, frequently occurring conformations. Because si
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::7dad0363c07f591467af0ec5d3d4a23c
https://doi.org/10.1002/prot.24685
https://doi.org/10.1002/prot.24685
Publikováno v:
Proteins: Structure, Function, and Bioinformatics. 80:2218-2234
Side chain optimization is a fundamental component of protein modeling applications such as docking, structural prediction, and design. In these applications side chain flexibility is often provided by rotamer or conformer libraries, which are collec
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::d445f9524c464a530993f76759977ec4
https://doi.org/10.1002/prot.24111
https://doi.org/10.1002/prot.24111
Autor:
Gevorg Grigoryan, Alessandro Senes, Jason E. Donald, Daniel W. Kulp, Sabareesh Subramaniam, Benjamin K. Mueller, Brett T. Hannigan
Publikováno v:
Journal of Computational Chemistry. 33:1645-1661
We present the Molecular Software Library (MSL), a Cþþ library for molecular modeling. MSL is a set of tools that supports a large variety of algorithms for the design, modeling, and analysis of macromolecules. Among the main features supported by
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9ef9a9003d27b0adf4e17e6c9c450a04
https://doi.org/10.1002/jcc.22968
https://doi.org/10.1002/jcc.22968
Autor:
Ivan Rayment, Alessandro Senes, Ambalika S. Khadria, Loren M. LaPointe, Keenan C. Taylor, Sabareesh Subramaniam
Publikováno v:
Biochemistry. 52(15)
We report the first structural analysis of an integral membrane protein of the bacterial divisome. FtsB is a single-pass membrane protein with a periplasmic coiled coil. Its heterologous association with its partner FtsL represents an essential event
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a42c463d0895aa09a06a022058f73ac5
https://pubmed.ncbi.nlm.nih.gov/23520975
https://pubmed.ncbi.nlm.nih.gov/23520975
Publikováno v:
Proteins. 80(9)
Side chain optimization is a fundamental component of protein modeling applications such as docking, structural prediction, and design. In these applications side chain flexibility is often provided by rotamer or conformer libraries, which are collec
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::523b1a2bfa5b14cc302e72547cd5f7dd
https://pubmed.ncbi.nlm.nih.gov/22576292
https://pubmed.ncbi.nlm.nih.gov/22576292
Publikováno v:
BCB
Side chain optimization is the process of packing the sidechains of a protein onto a fixed backbone structure, such that the energy of the resultant structure is minimized. The continuous space of sidechain conformations is typically handled by discr
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::e96606c3c4010700e257bfdf2d2b1798
https://doi.org/10.1145/2147805.2147875
https://doi.org/10.1145/2147805.2147875