Zobrazeno 1 - 10 of 23 pro vyhledávání: '"STANLEY M. SWANSON"'
1
Effective electron-density map improvement and structure validation on a Linux multi-CPU web cluster: The TB Structural Genomics Consortium Bias Removal Web Service
Autor: Stanley M. Swanson, Bernhard Rupp, Vinod Reddy, James C. Sacchettini, Katherine A. Kantardjieff, Brent W. Segelke
Publikováno v: Acta Crystallographica Section D Biological Crystallography. 59:2200-2210
Anticipating a continuing increase in the number of structures solved by molecular replacement in high-throughput crystallography and drug-discovery programs, a user-friendly web service for automated molecular replacement, map improvement, bias remo
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3b88c6ec5bafba793f94a14e369235bf
https://doi.org/10.1107/s0907444903020316
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2
Determination of the structure of an endoglucanase fromAspergillus nigerand its mode of inhibition by palladium chloride
Autor: Klaus Witte, Stanley M. Swanson, Shahram Khademi, Arnold Wartenberg, Dachuan Zhang, Edgar F. Meyer
Publikováno v: Acta Crystallographica Section D Biological Crystallography. 58:660-667
The fungus Aspergillus niger is a main source of industrial cellulase. beta-1,4-Endoglucanase is the major component of cellulase from A. niger. In spite of widespread applications, little is known about the structure of this enzyme. Here, the struct
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b4bdc3c93e3254b0712d2650126f8bfa
https://doi.org/10.1107/s0907444902003360
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3
The structure of an insect chymotrypsin
Autor: E.F. Meyer, Stanley M. Swanson, David H. Russell, Myhanh Nguyen, Istvan Botos, Edgar F. Meyer, John M. Koomen
Publikováno v: Journal of Molecular Biology. 298:895-901
The South American imported fire ant (Solenopsis invicta), without natural enemies in the United States, widely infests the southern United States, causing more than a half billion dollars in health and agriculture-related damage annually in Texas al
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4845e2abbb2551b784c3ca23f8b20948
https://doi.org/10.1006/jmbi.2000.3699
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4
Relativistic impulse dynamics
Autor: Stanley M. Swanson
Publikováno v: Physical review. E, Statistical, nonlinear, and soft matter physics. 84(2 Pt 2)
Classical electrodynamics has some annoying rough edges. The self-energy of charges is infinite without a cutoff. The calculation of relativistic trajectories is difficult because of retardation and an average radiation reaction term. By reconceptual
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::128316e38f32fea8958f8a7cba491e3c
https://pubmed.ncbi.nlm.nih.gov/21929132
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5
Dynamical analysis of the conformation of the active site of porcine pancreatic elastase in native and Michaelis complex states. Molecular dynamics simulations
Autor: Stanley M. Swanson, A. Ła̧czkowski, Maciej Geller, Edgar F. Meyer
Publikováno v: Computers & Chemistry. 15:261-272
Mechanistic details of events preceeding and occurring during enzymatic catalysis are extremely difficult to obtain experimentally. While molecular dynamics methods permit the simulation of discrete steps along the catalytic pathway, they also can ov
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::8d6dcc95f91a8b379c40bf5e349ca652
https://doi.org/10.1016/0097-8485(91)80015-e
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7
Dynamic properties of the first enzymatic reaction steps of porcine pancreatic elastase. How rigid is the active site of the native enzyme? Molecular dynamics simulation
Autor: Gail Carlson‐Golab, Stanley M. Swanson, Maciej Geller, Edgar F. Meyer, Bogdan Lesyng
Publikováno v: Biopolymers. 30:781-796
Two molecular dynamics simulations (100 and 50 ps) of native porcine pancreatic elastase i.e., without bound substrate and with the active site hydrated by a dome of water (630 molecules) have been performed. Dynamical properties of the catalytic tet
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0bb17961a2ae5705bb43a65e42b5b234
https://doi.org/10.1002/bip.360300713
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8
Structure of recombinant mouse collagenase-3 (MMP-13)
Autor: E.F. Meyer, Istvan Botos, Edgar F. Meyer, Vincent Lemaître, Yves Eeckhout, Stanley M. Swanson
Publikováno v: Journal of molecular biology. 292(4)
The matrix metalloproteinases are crucial in the physiological and pathological degradation of the mammalian extracellular matrix, including breast tumours, and osteoarthritic cartilage. These enzymes are classified according to their matrix substrat
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b6a7f455ff8e5c5cf82de476236e13b1
https://pubmed.ncbi.nlm.nih.gov/10525409
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9
Analysis of the structure of HIV-1 protease complexed with a hexapeptide inhibitor. Part II: Molecular dynamic studies of the active site region
Autor: Maciej Geller, Stanley M. Swanson, Maria Miller, Jacob Maizel
Publikováno v: Proteins. 27(2)
Six models of the catalytic site of HIV-1 protease complexed with a reduced peptide inhibitor, MVT-101, were investigated. These studies focused on the details of protonation of the active site, its total net charge and hydrogen bonding pattern, whic
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d3bb757fe7b78be5aaaee9735e58e383
https://pubmed.ncbi.nlm.nih.gov/9061783
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