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Automated FingerPrint Background removal: FPB

Autor: Morgante Michele, Scalabrin Simone, Policriti Alberto

Publikováno v: BMC Bioinformatics, Vol 10, Iss 1, p 127 (2009)

Abstract Background The construction of a whole-genome physical map has been an essential component of numerous genome projects initiated since the inception of the Human Genome Project. Its usefulness has been proved for whole-genome shotgun project

Externí odkaz: https://doaj.org/article/50641ee4073e4602925bcd9e161dcb59

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Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species

Autor: Bradnam, Keith R., Fass, Joseph N., Alexandrov, Anton, Baranay, Paul, Bechner, Michael, Birol, İnanç, Boisvert, Sébastien, Chapman, Jarrod A., Chapuis, Guillaume, Chikhi, Rayan, Chitsaz, Hamidreza, Chou, Wen-Chi, Corbeil, Jacques, Del Fabbro, Cristian, Docking, T. Roderick, Durbin, Richard, Earl, Dent, Emrich, Scott, Fedotov, Pavel, Fonseca, Nuno A., Ganapathy, Ganeshkumar, Gibbs, Richard A., Gnerre, Sante, Godzaridis, Élénie, Goldstein, Steve, Haimel, Matthias, Hall, Giles, Haussler, David, Hiatt, Joseph B., Ho, Isaac Y., Howard, Jason, Hunt, Martin, Jackman, Shaun D., Jaffe, David B, Jarvis, Erich, Jiang, Huaiyang, Kazakov, Sergey, Kersey, Paul J., Kitzman, Jacob O., Knight, James R., Koren, Sergey, Lam, Tak-Wah, Lavenier, Dominique, Laviolette, François, Li, Yingrui, Li, Zhenyu, Liu, Binghang, Liu, Yue, Luo, Ruibang, MacCallum, Iain, MacManes, Matthew D, Maillet, Nicolas, Melnikov, Sergey, Vieira, Bruno Miguel, Naquin, Delphine, Ning, Zemin, Otto, Thomas D., Paten, Benedict, Paulo, Octávio S., Phillippy, Adam M., Pina-Martins, Francisco, Place, Michael, Przybylski, Dariusz, Qin, Xiang, Qu, Carson, Ribeiro, Filipe J, Richards, Stephen, Rokhsar, Daniel S., Ruby, J. Graham, Scalabrin, Simone, Schatz, Michael C., Schwartz, David C., Sergushichev, Alexey, Sharpe, Ted, Shaw, Timothy I., Shendure, Jay, Shi, Yujian, Simpson, Jared T., Song, Henry, Tsarev, Fedor, Vezzi, Francesco, Vicedomini, Riccardo, Wang, Jun, Worley, Kim C., Yin, Shuangye, Yiu, Siu-Ming, Yuan, Jianying, Zhang, Guojie, Zhang, Hao, Zhou, Shiguo, Korf, Ian F.

Publikováno v: GigaScience 2:10 (2013)

Background - The process of generating raw genome sequence data continues to become cheaper, faster, and more accurate. However, assembly of such data into high-quality, finished genome sequences remains challenging. Many genome assembly tools are av

Externí odkaz: http://arxiv.org/abs/1301.5406

The limits and potential of paleogenomic techniques for reconstructing grapevine domestication

Autor: Wales, Nathan, Ramos Madrigal, Jazmín, Cappellini, Enrico, Carmona Baez, Aldo, Samaniego Castruita, José Alfredo, Romero-Navarro, J. Alberto, Carøe, Christian, Ávila-Arcos, María C., Peñaloza, Fernando, Moreno-Mayar, J. Víctor, Gasparyan, Boris, Zardaryan, Diana, Bagoyan, Tamara, Smith, Alexia, Pinhasi, Ron, Bosi, Giovanna, Fiorentino, Girolamo, Grasso, Anna Maria, Celant, Alessandra, Bar-Oz, Guy, Tepper, Yotam, Hall, Allan, Scalabrin, Simone, Miculan, Mara, Morgante, Michele, Di Gaspero, Gabriele, Gilbert, M. Thomas P.

Publikováno v: In Journal of Archaeological Science August 2016 72:57-70