Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica

Autor: Keith D. James, N. Hamlin, Simon Rutter, Ana Cerdeño-Tárraga, David Harris, David L. Saunders, Bart Barrell, Matthew Collins, Tracey Chillingworth, Mandy Sanders, Stephen D. Bentley, Arlette Goble, Karen Mungall, Mark Achtman, Paul Davis, Anne Cronin, Louise M. Temple, Ester Rabbinowitsch, Barbara Harris, David Basham, Louise Unwin, Duncan J. Maskell, S. Holroyd, Heidi Hauser, Mark Simmonds, Kay Jagels, Nicholas R. Thomson, Katherine Seeger, Claire Price, Susan O'Neil, Jonathan Doggett, Doug Ormond, Michael A. Quail, Rebecca Atkin, Julian Parkhill, Sally Whitehead, Halina Norberczak, Carol Churcher, K. Stevens, Nathalie Bason, Andrew Preston, S. Squares, Matthew T. G. Holden, Mohammed Sebaihia, Inna Cherevach, Sharon Moule, Steven K. Baker, R. Squares, Sampsa Leather, Sarah Sharp, Jason Skelton, Lee Murphy, Theresa Feltwell

Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica are closely related Gram-negative beta-proteobacteria that colonize the respiratory tracts of mammals. B. pertussis is a strict human pathogen of recent evolutionary origin

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ff995fbafe726551dc59a1653744efab
https://doi.org/10.1038/ng1227

DNA sequence and analysis of human chromosome 9

Autor: L K Colman, S S White, R Heathcott, K D Ambrose, C Griffiths, C L Bagguley, Christine Lloyd, Jim Davies, James G. R. Gilbert, Richard Durbin, Carol Scott, Rebekah Hall, Graeme Bethel, Adrienne Hunt, C Carder, A Tromans, G Tamlyn-Hall, Jane Rogers, J Garnett, L M Faulkner, J C Chapman, Benjamin Phillimore, M Grant, A Wild, Christopher J. Gillson, S Hammond, A K Babbage, Sophie Palmer, C. D. Skuce, V. Cobley, Margaret A. Leversha, Robert W. Plumb, J. M. Wallis, Lucy Matthews, Sarah E. Smith, Mark Griffiths, Karen Oliver, J Tester, Christopher M. Johnson, M Earthrowl, K L Novik, Graeme T Clark, Kirsten McLay, Michelle Smith, R M Younger, T Nickerson, K F Barlow, A. King, S. M. Clegg, Mark T. Ross, K M Culley, R. E. Collier, K Bates, Nigel P. Carter, Sarah E. Hunt, Matthew Humphries, Kevin L. Howe, R Ainscough, Matthew Jones, J P Almeida, Laurens G. Wilming, R Patel, C M Clee, A M Kimberley, David Niblett, Gareth Maslen, Jane E. Loveland, Pawandeep Dhami, J C Wyatt, Philip Howden, Harminder Sehra, N Corby, Stephan Beck, Andrew J. Mungall, Cordelia Langford, Mohammed J. R. Ghori, O. T. McCann, Sarah Milne, Ian Dunham, C A Edwards, J Y Brown, Matthew Dunn, A J Theaker, Darren Grafham, Alan Tracey, S. Searle, Anne Parker, John Burton, Amanda McMurray, H Whittaker, R I S Ashwell, M Mashreghi-Mohammadi, P Garner, A J Brown, O. Beasley, Michele Clamp, A Thorpe, Daniel Leongamornlert, Alan Coulson, Y. Ramsey, Paul Wray, N Sycamore, Helen Beasley, M. J F Moore, Dave Willey, K M Porter, S Y Clark, A I Peck, Tim Hubbard, D. M. Lloyd, David R. Bentley, A Joy, Joanna Harley, L Spraggon, J Lovell, Anthony P. West, E. Hart, Adam Frankish, M. Kay, Catherine M. Rice, Matthew D. Francis, S A Ranby, Duncan W. Thomas, Elizabeth J. Huckle, T. E. Wilmer, Sean Humphray, L Young, W Burrill, David Beare, B Tubby, S Lawlor, E Sheridan, Susan M. Gribble, J Frankland, A E Ellington, Charles A. Steward, K S Halls, Roger Horton, Melanie M. Wall, James C. Mullikin, D C Burford, S. Holmes, L M Gilby, T D Andrews, Christine P. Bird, Gareth R. Howell, Stephen Keenan, Joanna Collins, S. Squares, Ruby Banerjee, Jennifer L. Ashurst, Sarah Sims, S Bray-Allen, Lisa French, G. J. Coville, Paul Heath, A. V. Pearce, S. Whitehead, Sancha Martin, J Bailey, J Brook, Darren Barker, Rebecca Glithero, Jonathan Wood, E K Overton-Larty, K A Evans, S. Blakey, John Sulston, Gavin K. Laird, Sam Phillips, S J McLaren

Publikováno v: Nature. 429:369-374

Chromosome 9 is highly structurally polymorphic. It contains the largest autosomal block of heterochromatin, which is heteromorphic in 6–8% of humans, whereas pericentric inversions occur in more than 1% of the population. The finished euchromatic

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9cb4a5947796c48eccf8e948aa91b0c7
https://doi.org/10.1038/nature02465

Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus

Autor: S. Squares, Simon Rutter, William C. Nierman, David B. Archer, Sven Konzack, H. Stanley Kim, Michael A. Quail, Jae-Hyuk Yu, Miguel A. Peñalva, Mark L. Farman, Neil Rawlins, Claire Price, Natalie D. Fedorova, Fredj Tekaia, Matthew Berriman, Sam Griffith-Jones, Robert L. Davies, David W. Denning, Hubert Renauld, Katsuhiko Kitamoto, Jennifer R. Wortman, Claire M. Fraser, Isabelle Mouyna, Brian J. Haas, H. Khouri, Sean Humphray, Resham Kulkarni, Anne Lafton, James E. Galagan, John Woodward, Juan C. Sánchez-Ferrero, Michel Monod, Neil Hall, J. Weidman, Owen White, Ariette Goble, Stephanie Mulligan, Marie Adele Rajandream, Matthew Collins, José Luis García, Michio Takeuchi, Gregory S. May, Santiago Rodríguez de Córdoba, Ian T. Paulsen, T. Feldblyum, Dan Chen, Bethan L. Pritchard, Kathy Seeger, Charles Lu, William H. Majoros, Geoffrey D. Robson, Steven L. Salzberg, Javier Arroyo, Bruce L. Miller, Susan O'Neil, Paul Bowyer, María Molina, Javier Jiménez, Rob Squares, Gustavo H. Goldman, Masayuki Machida, Keietsu Abe, Mihaela Pertea, H. Horiuchi, Nancy P. Keller, Lee Murphy, Jiaqi Huang, Carlos R. Vázquez de Aldana, Nigel Fosker, Nadia Fedorova, Richard Coulsen, Angela Lord, Kiyoshi Asai, Yasmin Ali Mohamoud, Bart Barrell, Toshitaka Kumagai, Paul S. Dyer, Michael J. Anderson, Weixi Li, David L. Saunders, David Harris, Katsuya Gomi, María Josefa Marcos García, José Manuel Rodríguez-Peña, Tetsuo Kobayashi, Miguel del Nogal Sánchez, Audrey Fraser, Geoffrey Turner, Utz Reichard, Arnab Pain, Reinhard Fischer, Catherine M. Ronning, Hubertus Haas, Jean-Paul Latgé, Ester Rabbinowitsch, Joan W. Bennett, Clara Bermejo, R. Gwilliam

Publikováno v: Nature
Nature, 2005, 438 (7071), pp.1151-1156. ⟨10.1038/nature04332⟩
Nature, Nature Publishing Group, 2005, 438 (7071), pp.1151-1156. ⟨10.1038/nature04332⟩

International audience; Aspergillus fumigatus is exceptional among microorganisms in being both a primary and opportunistic pathogen as well as a major allergen. Its conidia production is prolific, and so human respiratory tract exposure is almost co

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::71aa199d884d9100688a2f519792be45
https://hal-pasteur.archives-ouvertes.fr/pasteur-02639869

Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2)

Autor: John Woodward, Keith F. Chater, David L. Saunders, Kim Rutherford, Karen Oliver, T. Hornsby, Nicholas R. Thomson, L. Larke, Carton W. Chen, Ana Cerdeño-Tárraga, Simon Rutter, Andreas Wietzorrek, H. M. Kieser, Arlette Goble, Ann Cronin, Lee Murphy, Sarah Sharp, D. Harper, Michael A. Quail, R. Squares, Alex Bateman, Bart Barrell, Andrew G. Fraser, S. Howarth, Tobias Kieser, Susan O'Neil, Kathy Seeger, Julian Parkhill, S. Squares, David A. Hopwood, Govind Chandra, Mark O. Collins, Stephen D. Bentley, K. Taylor, Marie-Adèle Rajandream, Steve D.M. Brown, Keith D. James, Ester Rabbinowitsch, T. Warren, J. Hidalgo, Chih-Hung Huang, David Harris, Gregory L. Challis

Publikováno v: Nature. 417(6885)

Streptomyces coelicolor is a representative of the group of soil-dwelling, filamentous bacteria responsible for producing most natural antibiotics used in human and veterinary medicine. Here we report the 8,667,507 base pair linear chromosome of this

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::27c73af9609c57bfc72bd0aa72a61bbc
https://pubmed.ncbi.nlm.nih.gov/12000953

The complete nucleotide sequence of chromosome 3 of Plasmodium falciparum

Autor: K. Oliver, D. Brown, Sharon Moule, Jason Skelton, Sharen Bowman, Karen Mungall, J. McLean, Alister Craig, Daniel Lawson, S. Holroyd, D. Basham, S. Squares, Kay Jagels, S. Rutter, T. Hornsby, S Kyes, Paul Horrocks, Carol Churcher, Theresa Feltwell, Rob Squares, John Sulston, Lee Murphy, Robert L. Davies, Bart Barrell, N. Hamlin, S. Gentles, Rhian Gwilliam, David Harris, Tracey Chillingworth, Michael A. Quail, J. R. Woodward, Bijay Jassal, Chris I. Newbold, K. Devlin, Sally Whitehead, Marie-Adèle Rajandream

Publikováno v: Nature. 400(6744)

Analysis of Plasmodium falciparum chromosome 3, and comparison with chromosome 2, highlights novel features of chromosome organization and gene structure. The sub-telomeric regions of chromosome 3 show a conserved order of features, including repetit

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::48c9df4fa4dc8b805beeb46119d41224
https://pubmed.ncbi.nlm.nih.gov/10448849