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Akademický článek

Differences in meristem size and expression of branching genes are associated with variation in panicle phenotype in wild and domesticated African rice

Autor: K. N. Ta, H. Adam, Y. M. Staedler, J. Schönenberger, T. Harrop, J. Tregear, N. V. Do, P. Gantet, A. Ghesquière, S. Jouannic

Publikováno v: EvoDevo, Vol 8, Iss 1, Pp 1-14 (2017)

Abstract Background The African rice Oryza glaberrima was domesticated from its wild relative Oryza barthii about 3000 years ago. During the domestication process, panicle complexity changed from a panicle with low complexity in O. barthii, to a high

Externí odkaz: https://doaj.org/article/415eb63699aa4a6998b5a57fb69a017b

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Akademický článek

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Akademický článek

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MOESM7 of Differences in meristem size and expression of branching genes are associated with variation in panicle phenotype in wild and domesticated African rice

Autor: K. Ta, H. Adam, Y. Staedler, J. SchĂśnenberger, T. Harrop, J. Tregear, N. Do, P. Gantet, A. GhesquiĂ¨Re, S. Jouannic

Additional file 7. miR156 and miR529 recognition sites in SPL14 mRNA target in O. sativa (OsSPL14), O. glaberrima (OgSPL14) and O. barthii (ObSPL14). The single nucleotide change in O. sativa from C to A at the Osa-miR156 targeted site in OsSPL14 as

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::60e10cb4522467b18aadf55107b65283

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Additional file 12: of miR2118-triggered phased siRNAs are differentially expressed during the panicle development of wild and domesticated African rice species

Autor: K. Ta, F. Sabot, H. Adam, Y. Vigouroux, S. De Mita, A. GhesquiĂ¨Re, N. Do, P. Gantet, S. Jouannic

Expression patterns of phasiRNAs and lncRNA precursors associated with 21-nucleotide phased loci in O. glaberrima and O. barthii. qRT-PCR analysis of 21-nucletiode phasiRNAs expression levels (a) and lncRNAs (b) from 3 distinct phased loci (PH557, PH

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bd822f89c357bf2d39c5aa2e1a7d8e38

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Additional file 8: of miR2118-triggered phased siRNAs are differentially expressed during the panicle development of wild and domesticated African rice species

Autor: K. Ta, F. Sabot, H. Adam, Y. Vigouroux, S. De Mita, A. GhesquiĂ¨Re, N. Do, P. Gantet, S. Jouannic

Sequences and phasiRNA abundances of the 4 phased loci used for validation. The 4 phased loci reported here were used for stem-loop RT-PCR (phasiRNAs) and classical RT-PCR (lncRNAs) validation. The positions of the phased loci on MSU7.0 chromosomes a

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6578f12da32d2fe2629da78fd849e8c3

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Additional file 6: of miR2118-triggered phased siRNAs are differentially expressed during the panicle development of wild and domesticated African rice species

Autor: K. Ta, F. Sabot, H. Adam, Y. Vigouroux, S. De Mita, A. GhesquiĂ¨Re, N. Do, P. Gantet, S. Jouannic

21-nt small RNAs associated to phased loci and mature miRNA families detected in young panicles of O. glaberrima and O. barthii. (a) O. sativa Nipponbare loci associated with 21-nt phased and unphased siRNAs from O. barthii and O. glaberrima detected

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::321c297ae190259f4c1c277c57df19df

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Additional file 3: of miR2118-triggered phased siRNAs are differentially expressed during the panicle development of wild and domesticated African rice species

Autor: K. Ta, F. Sabot, H. Adam, Y. Vigouroux, S. De Mita, A. GhesquiĂ¨Re, N. Do, P. Gantet, S. Jouannic

Genomic distribution and abundance of O. barthii and O. glaberrima panicle-derived small RNAs on O. sativa nipponbare genome. (a) Distribution and abundance of O. barthii reads vs. O. sativa nipponbare genome MSU7.0. (b) Distribution and abundance of

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::07e9944d5cf6e36b51976278699a3053

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