Zobrazeno 1 - 4
of 4
pro vyhledávání: '"S. C. Lovell"'
Publikováno v:
Proteins. 40(3)
All published rotamer libraries contain some rotamers that exhibit impossible internal atomic overlaps if built in ideal geometry with all hydrogen atoms. Removal of uncertain residues (mainly those with B-factors/=40 or van der Waals overlaps/=0.4 A
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::4cea1756cfb4d4627b29c81734134010
https://pubmed.ncbi.nlm.nih.gov/10861930
https://pubmed.ncbi.nlm.nih.gov/10861930
Autor:
J M, Word, S C, Lovell, T H, LaBean, H C, Taylor, M E, Zalis, B K, Presley, J S, Richardson, D C, Richardson
Publikováno v:
Journal of molecular biology. 285(4)
The technique of small-probe contact dot surfaces is described as a method for calculating and displaying the detailed atomic contacts inside or between molecules. It allows one both to measure and to visualize directly the goodness-of-fit of packing
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::59345d61462cf0d18413f13561a1f8c9
https://pubmed.ncbi.nlm.nih.gov/9917407
https://pubmed.ncbi.nlm.nih.gov/9917407
Asparagine and glutamine: using hydrogen atom contacts in the choice of side-chain amide orientation
Publikováno v:
Journal of molecular biology. 285(4)
Small-probe contact dot surface analysis, with all explicit hydrogen atoms added and their van der Waals contacts included, was used to choose between the two possible orientations for each of 1554 asparagine (Asn) and glutamine (Gln) side-chain amid
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::790785288db3b4c19668797768d74b8d
https://pubmed.ncbi.nlm.nih.gov/9917408
https://pubmed.ncbi.nlm.nih.gov/9917408