Zobrazeno 1 - 10
of 556
pro vyhledávání: '"S N, Reddy"'
Publikováno v:
Genome Biology, Vol 24, Iss 1, Pp 1-16 (2023)
Abstract Background Alternative splicing is a widespread regulatory phenomenon that enables a single gene to produce multiple transcripts. Among the different types of alternative splicing, intron retention is one of the least explored despite its hi
Externí odkaz:
https://doaj.org/article/4a603cdf990c4d1698aab23c03b2f0b5
Autor:
Runxuan Zhang, Richard Kuo, Max Coulter, Cristiane P. G. Calixto, Juan Carlos Entizne, Wenbin Guo, Yamile Marquez, Linda Milne, Stefan Riegler, Akihiro Matsui, Maho Tanaka, Sarah Harvey, Yubang Gao, Theresa Wießner-Kroh, Alejandro Paniagua, Martin Crespi, Katherine Denby, Asa ben Hur, Enamul Huq, Michael Jantsch, Artur Jarmolowski, Tino Koester, Sascha Laubinger, Qingshun Quinn Li, Lianfeng Gu, Motoaki Seki, Dorothee Staiger, Ramanjulu Sunkar, Zofia Szweykowska-Kulinska, Shih-Long Tu, Andreas Wachter, Robbie Waugh, Liming Xiong, Xiao-Ning Zhang, Ana Conesa, Anireddy S. N. Reddy, Andrea Barta, Maria Kalyna, John W. S. Brown
Publikováno v:
Genome Biology, Vol 23, Iss 1, Pp 1-37 (2022)
Abstract Background Accurate and comprehensive annotation of transcript sequences is essential for transcript quantification and differential gene and transcript expression analysis. Single-molecule long-read sequencing technologies provide improved
Externí odkaz:
https://doaj.org/article/a753e2cdc48c4e7cbc7f127b69335e29
Publikováno v:
BMC Bioinformatics, Vol 23, Iss 1, Pp 1-9 (2022)
Abstract Background Despite recent progress in basecalling of Oxford nanopore DNA sequencing data, its wide adoption is still being hampered by its relatively low accuracy compared to short read technologies. Furthermore, very little of the recent re
Externí odkaz:
https://doaj.org/article/7ce4366301454cc18a0035af51a36eb0
Publikováno v:
Cells, Vol 12, Iss 15, p 1986 (2023)
Calmodulin-binding transcription activators (CAMTAs), a small family of highly conserved transcription factors, function in calcium-mediated signaling pathways. Of the six CAMTAs in Arabidopsis, CAMTA3 regulates diverse biotic and abiotic stress resp
Externí odkaz:
https://doaj.org/article/381e1ab037254e0da9c766988dd9b6fd
Autor:
Haroon Butt, Jeremie Bazin, Sahar Alshareef, Ayman Eid, Moussa Benhamed, Anireddy S. N. Reddy, Martin Crespi, Magdy M. Mahfouz
Publikováno v:
Communications Biology, Vol 4, Iss 1, Pp 1-14 (2021)
Butt et al. used CRISPR-mediated directed evolution to generate rice mutants for the spliceosome components SF3B1 and PHF5A. They demonstrate that these mutants have different levels of sensitivity to salt treatments and suggest that the strategies t
Externí odkaz:
https://doaj.org/article/703302990f754f29a4eed38060c57568
Autor:
Yubang Gao, Xuqing Liu, Bizhi Wu, Huihui Wang, Feihu Xi, Markus V. Kohnen, Anireddy S. N. Reddy, Lianfeng Gu
Publikováno v:
Genome Biology, Vol 22, Iss 1, Pp 1-17 (2021)
Abstract There are no comprehensive methods to identify N 6-methyladenosine (m6A) at single-base resolution for every single transcript, which is necessary for the estimation of m6A abundance. We develop a new pipeline called Nanom6A for the identifi
Externí odkaz:
https://doaj.org/article/f172a26c7c3b4c6cb616d64b1b8614e8
Autor:
Huiyuan Wang, Sheng Liu, Xiufang Dai, Yongkang Yang, Yunjun Luo, Yubang Gao, Xuqing Liu, Wentao Wei, Huihui Wang, Xi Xu, Anireddy S. N. Reddy, Pankaj Jaiswal, Wei Li, Bo Liu, Lianfeng Gu
Publikováno v:
Frontiers in Plant Science, Vol 12 (2021)
Populus trichocarpa (P. trichocarpa) is a model tree for the investigation of wood formation. In recent years, researchers have generated a large number of high-throughput sequencing data in P. trichocarpa. However, no comprehensive database that pro
Externí odkaz:
https://doaj.org/article/4c67e0a59bd74b599beced2b16273edf
Autor:
Haroon Butt, Jeremie Bazin, Kasavajhala V. S. K. Prasad, Nourelislam Awad, Martin Crespi, Anireddy S. N. Reddy, Magdy M. Mahfouz
Publikováno v:
Cells, Vol 11, Iss 11, p 1796 (2022)
Abiotic stresses profoundly affect plant growth and development and limit crop productivity. Pre-mRNA splicing is a major form of gene regulation that helps plants cope with various stresses. Serine/arginine (SR)-rich splicing factors play a key role
Externí odkaz:
https://doaj.org/article/d81909b34d1c402c80b0df23b3f8e3fb
Autor:
Kurunji Kumaran, V. Bhaskar, Rajasigamani, Rama Krishna Alla, M. Mohamed Arafath, S. N. Reddy Duvvuri
Publikováno v:
UTTAR PRADESH JOURNAL OF ZOOLOGY. :88-94
Aim: This study aimed to evaluate the effect of various concentrations of TiO2 nanoparticles incorporation on the shear bond strength of the two different orthodontic composites. Materials and Methods: A total of 80 freshly extracted premolars were d
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::95dea0b708fc5735704fbfc2d724d8b2
https://doi.org/10.56557/upjoz/2023/v44i13395
https://doi.org/10.56557/upjoz/2023/v44i13395
Publikováno v:
Plant Methods, Vol 14, Iss 1, Pp 1-12 (2018)
Abstract Background Pre-mRNA splicing is an essential post-transcriptional process in all eukaryotes. In vitro splicing systems using nuclear or cytoplasmic extracts from mammalian cells, yeast, and Drosophila have provided a wealth of mechanistic in
Externí odkaz:
https://doaj.org/article/3baf38b4f89d43b382ebd5b4e083ae6f