Zobrazeno 1 - 8
of 8
pro vyhledávání: '"Sünje J Pamp"'
Autor:
Rene S Hendriksen, Oksana Lukjancenko, Patrick Munk, Mathis H Hjelmsø, Jennifer R Verani, Eric Ng'eno, Godfrey Bigogo, Samuel Kiplangat, Traoré Oumar, Lasse Bergmark, Timo Röder, John C Neatherlin, Onyango Clayton, Tine Hald, Susanne Karlsmose, Sünje J Pamp, Barry Fields, Joel M Montgomery, Frank M Aarestrup
Publikováno v:
PLoS ONE, Vol 14, Iss 10, p e0222531 (2019)
BackgroundWorldwide, the number of emerging and re-emerging infectious diseases is increasing, highlighting the importance of global disease pathogen surveillance. Traditional population-based methods may fail to capture important events, particularl
Externí odkaz:
https://doaj.org/article/6fdb2f6490a648aa9e978198ca906d76
Publikováno v:
BMC Genomics, Vol 25, Iss 1, Pp 1-11 (2024)
Abstract Background The possibility of recovering metagenome-assembled genomes (MAGs) from sequence reads allows for further insights into microbial communities and their members, possibly even analyzing such sequences with tools designed for single-
Externí odkaz:
https://doaj.org/article/650b2d6d5bad4266b75e85251fddcab9
Autor:
Dirk Höper, Josephine Grützke, Annika Brinkmann, Joël Mossong, Sébastien Matamoros, Richard J. Ellis, Carlus Deneke, Simon H. Tausch, Isabel Cuesta, Sara Monzón, Miguel Juliá, Thomas Nordahl Petersen, Rene S. Hendriksen, Sünje J. Pamp, Mikael Leijon, Mikhayil Hakhverdyan, Aaron M. Walsh, Paul D. Cotter, Lakshmi Chandrasekaran, Moon Y. F. Tay, Joergen Schlundt, Claudia Sala, Alessandra De Cesare, Andreas Nitsche, Martin Beer, Claudia Wylezich
Publikováno v:
Frontiers in Microbiology, Vol 11 (2020)
Metagenomics-based high-throughput sequencing (HTS) enables comprehensive detection of all species comprised in a sample with a single assay and is becoming a standard method for outbreak investigation. However, unlike real-time PCR or serological as
Externí odkaz:
https://doaj.org/article/164e01e2d411478786f4f6ee00210833
Autor:
Christian, Andersen, Libor, Zverina, Koosha, Ehtiati, Esben, Thormann, Hanne, Mordhorst, Sünje J, Pamp, Niels J, Madsen, Anders E, Daugaard
Publikováno v:
ACS Omega
Poly(dimethylsiloxane) (PDMS) is an attractive, versatile, and convenient material for use in biomedical devices that are in direct contact with the user. A crucial component in such a device is its surface in terms of antimicrobial properties preven
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::ef1f2875278bc09dcdc93a39cb22037c
https://pubmed.ncbi.nlm.nih.gov/34124478
https://pubmed.ncbi.nlm.nih.gov/34124478
Autor:
Calvin C. Chan, Isaac T. W. Harley, Paul T. Pfluger, Aurelien Trompette, Traci E. Stankiewicz, Jessica L. Allen, Maria E. Moreno-Fernandez, Michelle S. M. A. Damen, Jarren R. Oates, Pablo C. Alarcon, Jessica R. Doll, Matthew J. Flick, Leah M. Flick, Joan Sanchez-Gurmaches, Rajib Mukherjee, Rebekah Karns, Michael Helmrath, Thomas H. Inge, Stuart P. Weisberg, Sünje J. Pamp, David A. Relman, Randy J. Seeley, Matthias H. Tschöp, Christopher L. Karp, Senad Divanovic
Publikováno v:
Nature Communications, Vol 12, Iss 1, Pp 1-16 (2021)
Interactions between the immune system and adipose tissue contribute to the regulation of body weight, however, the underlying mechanisms remain incompletely understood. Here the authors dissect the role of two structurally and functionally similar i
Externí odkaz:
https://doaj.org/article/1874a0fdf3df440c914731f67be8205d
Publikováno v:
Microbiology Spectrum, Vol 10, Iss 2 (2022)
ABSTRACT Metagenomics is increasingly used to describe microbial communities in biological specimens. Ideally, the steps involved in the processing of the biological specimens should not change the microbiome composition in a way that it could lead t
Externí odkaz:
https://doaj.org/article/062f224ead8b455ab5f1e5e3e9462c50
Autor:
Rene S. Hendriksen, Patrick Munk, Patrick Njage, Bram van Bunnik, Luke McNally, Oksana Lukjancenko, Timo Röder, David Nieuwenhuijse, Susanne Karlsmose Pedersen, Jette Kjeldgaard, Rolf S. Kaas, Philip Thomas Lanken Conradsen Clausen, Josef Korbinian Vogt, Pimlapas Leekitcharoenphon, Milou G. M. van de Schans, Tina Zuidema, Ana Maria de Roda Husman, Simon Rasmussen, Bent Petersen, The Global Sewage Surveillance project consortium, Clara Amid, Guy Cochrane, Thomas Sicheritz-Ponten, Heike Schmitt, Jorge Raul Matheu Alvarez, Awa Aidara-Kane, Sünje J. Pamp, Ole Lund, Tine Hald, Mark Woolhouse, Marion P. Koopmans, Håkan Vigre, Thomas Nordahl Petersen, Frank M. Aarestrup
Publikováno v:
Nature Communications, Vol 10, Iss 1, Pp 1-12 (2019)
Obtaining data on antimicrobial resistance (AMR) from healthy human populations is difficult. Here, Hendriksen et al. use metagenomic analysis to obtain AMR data from untreated sewage from 79 sites in 60 countries, finding correlations with socio-eco
Externí odkaz:
https://doaj.org/article/e1cb1167bef748e5b629d0ee4367b54a
Autor:
Berith E. Knudsen, Lasse Bergmark, Patrick Munk, Oksana Lukjancenko, Anders Priemé, Frank M. Aarestrup, Sünje J. Pamp
Publikováno v:
mSystems, Vol 1, Iss 5 (2016)
ABSTRACT Explorations of complex microbiomes using genomics greatly enhance our understanding about their diversity, biogeography, and function. The isolation of DNA from microbiome specimens is a key prerequisite for such examinations, but challenge
Externí odkaz:
https://doaj.org/article/273653aaf8f349009176bfb5a979b751