Zobrazeno 1 - 10
of 16
pro vyhledávání: '"Ruoxia Zhao"'
Autor:
Holly M Funk, Ruoxia Zhao, Maggie Thomas, Sarah M Spigelmyer, Nichlas J Sebree, Regan O Bales, Jamison B Burchett, Justen B Mamaril, Patrick A Limbach, Michael P Guy
Publikováno v:
PLoS ONE, Vol 15, Iss 11, p e0242737 (2020)
Posttranscriptional modification of tRNA is critical for efficient protein translation and proper cell growth, and defects in tRNA modifications are often associated with human disease. Although most of the enzymes required for eukaryotic tRNA modifi
Externí odkaz:
https://doaj.org/article/e7f239aef046469c8bc28f0291c60ace
Autor:
Sameer Dixit, Alan C Kessler, Jeremy Henderson, Xiaobei Pan, Ruoxia Zhao, Gabriel Silveira D’Almeida, Sneha Kulkarni, Mary Anne T Rubio, Eva Hegedűsová, Robert L Ross, Patrick A Limbach, Brian D Green, Zdeněk Paris, Juan D Alfonzo
Publikováno v:
Nucleic Acids Research
Dixit, S, Kessler, A C, Henderson, J, Pan, X, Zhao, R, D'Almeida, G S, Kulkarni, S, Rubio, M A T, Hegedűsová, E, Ross, R L, Limbach, P A, Green, B D, Paris, Z & Alfonzo, J D 2021, ' Dynamic queuosine changes in tRNA couple nutrient levels to codon choice in Trypanosoma brucei ', Nucleic Acids Research, vol. 49, no. 22, pp. 12986-12999 . https://doi.org/10.1093/nar/gkab1204
Dixit, S, Kessler, A C, Henderson, J, Pan, X, Zhao, R, D'Almeida, G S, Kulkarni, S, Rubio, M A T, Hegedűsová, E, Ross, R L, Limbach, P A, Green, B D, Paris, Z & Alfonzo, J D 2021, ' Dynamic queuosine changes in tRNA couple nutrient levels to codon choice in Trypanosoma brucei ', Nucleic Acids Research, vol. 49, no. 22, pp. 12986-12999 . https://doi.org/10.1093/nar/gkab1204
Every type of nucleic acid in cells undergoes programmed chemical post-transcriptional modification. Generally, modification enzymes use substrates derived from intracellular metabolism, one exception is queuine (q)/queuosine (Q), which eukaryotes ob
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1a2ee557655385c375eb4defff11dae6
https://doi.org/10.1093/nar/gkab1204
https://doi.org/10.1093/nar/gkab1204
Autor:
Stefanie Kellner, Kayla Borland, Patrick A. Limbach, Melissa Kelley, Manasses Jora, Balasubrahmanyam Addepalli, Scott Abernathy, Ruoxia Zhao
Publikováno v:
Angewandte Chemie. 133:4007-4012
Liquid chromatography-tandem mass spectrometry (LC-MS/MS) has become the gold-standard technique to study RNA and its various modifications. While most research on RNA nucleosides has been focused on their biological roles, discovery of new modificat
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::00d175c010f571d3f70f596a972b919d
https://doi.org/10.1002/ange.202010793
https://doi.org/10.1002/ange.202010793
Autor:
Suzanne Walker, Oksana Koshla, Victor Fedorenko, Bohdan Ostash, Andriy Luzhetskyy, Maksym Myronovskyi, Patrick A. Limbach, Yuriy Dacyuk, Robert L. Ross, Yuliia Sehin, Ruoxia Zhao
Publikováno v:
Microbiology. 165:233-245
Streptomyces ghanaensis ATCC14672 is remarkable for its production of phosphoglycolipid compounds, moenomycins, which serve as a blueprint for the development of a novel class of antibiotics based on inhibition of peptidoglycan glycosyltransferases.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f17a3707f53575c0ad1572161003402f
https://doi.org/10.1099/mic.0.000747
https://doi.org/10.1099/mic.0.000747
Autor:
Ruoxia Zhao, Scott Abernathy, Gwenn Parungao, Manasses Jora, Patrick A. Limbach, Priti Thakur, Balasubrahmanyam Addepalli
Publikováno v:
Epitranscriptomics ISBN: 9783030716110
Quantitative characterization of the identity and location of nucleoside modifications (added posttranscriptionally) in RNA molecules is the first step for associating them to biochemical functions and disease. This chapter examines the ways to reduc
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::55295570f630c2b2a9c7a718656a9d3e
https://doi.org/10.1007/978-3-030-71612-7_21
https://doi.org/10.1007/978-3-030-71612-7_21
Autor:
Vivian G. Cheung, Robert L. Ross, Dongjun Li, Alan Bruzel, Joshua T. Burdick, Patrick A. Limbach, Ruoxia Zhao, Rajendra Prasad, Samuel H. Wilson, Yesenia Rodriguez, Yaojuan Liu, Christopher Grunseich, Jason A. Watts, Robert J. Crouch
Publikováno v:
Proceedings of the National Academy of Sciences of the United States of America
Significance Missing bases or abasic sites in the DNA were discovered in the 1960s and spawned the field of DNA repair and advanced our understanding of cancer and aging. In contrast, abasic sites in the RNA are not known except for the site in ribos
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::13dae901fee6c0840f71d92d7c3a480f
https://pubmed.ncbi.nlm.nih.gov/32788345
https://pubmed.ncbi.nlm.nih.gov/32788345
Autor:
Robert L. Ross, Cody M. Palumbo, Ruoxia Zhao, Peter A. Lobue, Peter A. Beal, Balasubrahmanyam Addepalli, Patrick A. Limbach, Manasses Jora, Andrew P. Burns
Publikováno v:
Journal of the American Society for Mass Spectrometry, vol 29, iss 8
The analytical identification of positional isomers (e.g., 3-, N4-, 5-methylcytidine) within the > 160 different post-transcriptional modifications found in RNA can be challenging. Conventional liquid chromatography coupled with tandem mass spectrome
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d1f01c3a7a0e173d7bfd015eebf841b0
https://escholarship.org/uc/item/6dk951kq
https://escholarship.org/uc/item/6dk951kq
Publikováno v:
Electrochimica Acta. 163:64-70
In this paper, we have developed a gold nanoparticle (GNP) decorated titanate nanotubes (TNT) nanocomposite that aids in the direct electron transfer of a large enzyme, such as glucose oxidase (GOD), in which the electroactive site of flavin adenine
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::ee54ebb53f618057fb226945ab46ca7b
https://doi.org/10.1016/j.electacta.2015.02.098
https://doi.org/10.1016/j.electacta.2015.02.098
Autor:
Yaojuan Liu, Rodriguez, Yesenia, Ross, Robert L., Ruoxia Zhao, Watts, Jason A., Grunseich, Christopher, Bruzel, Alan, Dongjun Li, Burdick, Joshua T., Prasad, Rajendra, Crouch, Robert J., Limbach, Patrick A., Wilson, Samuel H., Cheung, Vivian G.
Publikováno v:
Proceedings of the National Academy of Sciences of the United States of America; 8/25/2020, Vol. 117 Issue 34, p20689-20695, 7p
Publikováno v:
Biosensors and Bioelectronics. 31:101-104
The direct electrochemistry of horseradish peroxidase (HRP) on a novel sensing platform modified glassy carbon electrode (GCE) has been achieved. This sensing platform consists of Nafion, hydrophilic room-temperature ionic liquid (RTIL) and Au nanopa
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d8908838015bcacc2e8fe87085b074b7
https://doi.org/10.1016/j.bios.2011.09.045
https://doi.org/10.1016/j.bios.2011.09.045