Zobrazeno 1 - 10
of 18
pro vyhledávání: '"Ruben E. Valas"'
Publikováno v:
PLoS Computational Biology, Vol 5, Iss 3, p e1000315 (2009)
The spliceosome, a sophisticated molecular machine involved in the removal of intervening sequences from the coding sections of eukaryotic genes, appeared and subsequently evolved rapidly during the early stages of eukaryotic evolution. The last euka
Externí odkaz:
https://doaj.org/article/8b7cc3ccda10460798051d48af0c9d8b
Autor:
Ursula Goodenough, Brian Palenik, Katherine A. Barbeau, Christopher L. Dupont, Ahmed A. Moustafa, Zackary I. Johnson, Nathan G. Walworth, Jing Bai, Andrew E. Allen, Ruben E. Valas, Shane L. Hogle, Elizabeth L. Mann, J. Craig Venter, John P. McCrow, Robyn Roth
Publikováno v:
The ISME Journal
Transitions in community genomic features and biogeochemical processes were examined in surface and subsurface chlorophyll maximum (SCM) microbial communities across a trophic gradient from mesotrophic waters near San Diego, California to the oligotr
Autor:
Beverley R. Green, Gernot Glöckner, Thomas Mock, Remo Sanges, James A. Raymond, Michael G. Janech, Barbara R. Lyon, Kerrie Barry, Florian Leese, Ansgar Gruber, Joel Martin, Erika Lindquist, Matthew D. Clark, Robert Otillar, Ben J. Ward, Alexandra Z. Worden, Christoph Mayer, Antonio Emidio Fortunato, Micaela S. Parker, Christopher L. Dupont, Maria Immacolata Ferrante, Stephan Frickenhaus, Klaus Valentin, Hadi Quesneville, Vincent Moulton, Rachel Hipkin, Angela Falciatore, Igor V. Grigoriev, Christiane Uhlig, Chris Bowler, Cock van Oosterhout, Ruben E. Valas, Asaf Salamov, Jeremy Schmutz, E. Virginia Armbrust, Andrew E. Allen, Alaguraj Veluchamy, Jan Strauss, Peter G. Kroth, Mark McMullan, Taoyang Wu, Andrew Toseland, Pirita Paajanen, Florian Maumus
Publikováno v:
Nature
Nature, Nature Publishing Group, 2017, pp.536-540
Nature, 2017, 541, pp.536-540. ⟨10.1038/nature20803⟩
Nature, vol 541, iss 7638
Nature, Nature Publishing Group, 2017, 541, pp.536-540. ⟨10.1038/nature20803⟩
Nature, 541 (7638). pp. 536-540.
Mock, T; Otillar, RP; Strauss, J; McMullan, M; Paajanen, P; Schmutz, J; et al.(2017). Evolutionary genomics of the cold-Adapted diatom Fragilariopsis cylindrus. Nature, 541(7638), 536-540. doi: 10.1038/nature20803. Lawrence Berkeley National Laboratory: Retrieved from: http://www.escholarship.org/uc/item/7pt9h997
Nature, Nature Publishing Group, 2017, pp.536-540
Nature, 2017, 541, pp.536-540. ⟨10.1038/nature20803⟩
Nature, vol 541, iss 7638
Nature, Nature Publishing Group, 2017, 541, pp.536-540. ⟨10.1038/nature20803⟩
Nature, 541 (7638). pp. 536-540.
Mock, T; Otillar, RP; Strauss, J; McMullan, M; Paajanen, P; Schmutz, J; et al.(2017). Evolutionary genomics of the cold-Adapted diatom Fragilariopsis cylindrus. Nature, 541(7638), 536-540. doi: 10.1038/nature20803. Lawrence Berkeley National Laboratory: Retrieved from: http://www.escholarship.org/uc/item/7pt9h997
The Southern Ocean houses a diverse and productive community of organisms. Unicellular eukaryotic diatoms are the main primary producers in this environment, where photosynthesis is limited by low concentrations of dissolved iron and large seasonal f
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0a13948e132404ce063f1424998182b7
https://hal.sorbonne-universite.fr/hal-01587937
https://hal.sorbonne-universite.fr/hal-01587937
Autor:
Jonathan H. Badger, Andrew E. Allen, Ruben E. Valas, Christopher L. Dupont, Talina Konotchick
Publikováno v:
The New Phytologist
To increase knowledge of transcript diversity for the giant kelp, Macrocystis pyrifera, and assess gene expression across naturally occurring depth gradients in light, temperature and nutrients, we sequenced four cDNA libraries created from blades co
Autor:
Robert Friedman, Jeremy D. Selengut, R. Alexander Richter, Daniel H. Haft, Aaron L. Halpern, Roger S. Lasken, J. Craig Venter, Mary-Jane Lombardo, Mark Novotny, Douglas B. Rusch, Christopher L. Dupont, Shibu Yooseph, Ruben E. Valas, Joyclyn Yee-Greenbaum, Kenneth H. Nealson
Publikováno v:
The ISME Journal
Bacteria in the 16S rRNA clade SAR86 are among the most abundant uncultivated constituents of microbial assemblages in the surface ocean for which little genomic information is currently available. Bioinformatic techniques were used to assemble two n
Autor:
Stephane C. Lefebvre, Karen Beeri, John I. Glass, Thomas J. Deerinck, Jeffrey B. McQuaid, Christopher L. Dupont, Jeroen Gillard, Jelena Jablanovic, Alex P.R. Phillips, Hamilton O. Smith, John K. Brunson, Chari Noddings, Clyde A. Hutchison, Philip D. Weyman, Ruben E. Valas, Mark H. Ellisman, Bogumil J. Karas, J. Craig Venter, Andrew E. Allen, Rachel E. Diner
Publikováno v:
Nature Communications
Eukaryotic microalgae hold great promise for the bioproduction of fuels and higher value chemicals. However, compared with model genetic organisms such as Escherichia coli and Saccharomyces cerevisiae, characterization of the complex biology and bioc
Autor:
Carolina Megumi Mizuno, Karolina Ininbergs, Christopher L. Dupont, Ruben E. Valas, Francisco Rodriguez-Valera, Antonio Camacho, Rohit Ghai, Katherine D. McMahon, Claudia Mella Hernandez, Antonio Picazo, Beatriz Díez
Publikováno v:
Scientific Reports
Coastal lagoons, both hypersaline and freshwater, are common, but still understudied ecosystems. We describe, for the first time, using high throughput sequencing, the extant microbiota of two large and representative Mediterranean coastal lagoons, t
Autor:
Christopher L. Dupont, Mak A. Saito, Jing Bai, Andrew E. Allen, Erin M. Bertrand, Trina M. Norden-Krichmar, Ruben E. Valas
Diatoms are responsible for ∼40% of marine primary production and are key players in global carbon cycling. There is mounting evidence that diatom growth is influenced by cobalamin (vitamin B 12 ) availability. This cobalt-containing micronutrient
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1e665ec77adf0a89c431b76dbfd3b11e
https://europepmc.org/articles/PMC3387067/
https://europepmc.org/articles/PMC3387067/
Publikováno v:
Evolutionary Genomics and Systems Biology
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::244e1040dd646450684b0adf12775290
https://doi.org/10.1002/9780470570418.ch8
https://doi.org/10.1002/9780470570418.ch8
History of biological metal utilization inferred through phylogenomic analysis of protein structures
Autor:
Andrew Butcher, Ruben E. Valas, Christopher L. Dupont, Philip E. Bourne, Gustavo Caetano-Anollés
The fundamental chemistry of trace elements dictates the molecular speciation and reactivity both within cells and the environment at large. Using protein structure and comparative genomics, we elucidate several major influences this chemistry has ha
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4311a73007521a8014c76a9010641101
https://europepmc.org/articles/PMC2890839/
https://europepmc.org/articles/PMC2890839/