Tractography dissection variability: What happens when 42 groups dissect 14 white matter bundles on the same dataset?

Autor: Kurt G. Schilling, François Rheault, Laurent Petit, Colin B. Hansen, Vishwesh Nath, Fang-Cheng Yeh, Gabriel Girard, Muhamed Barakovic, Jonathan Rafael-Patino, Thomas Yu, Elda Fischi-Gomez, Marco Pizzolato, Mario Ocampo-Pineda, Simona Schiavi, Erick J. Canales-Rodríguez, Alessandro Daducci, Cristina Granziera, Giorgio Innocenti, Jean-Philippe Thiran, Laura Mancini, Stephen Wastling, Sirio Cocozza, Maria Petracca, Giuseppe Pontillo, Matteo Mancini, Sjoerd B. Vos, Vejay N. Vakharia, John S. Duncan, Helena Melero, Lidia Manzanedo, Emilio Sanz-Morales, Ángel Peña-Melián, Fernando Calamante, Arnaud Attyé, Ryan P. Cabeen, Laura Korobova, Arthur W. Toga, Anupa Ambili Vijayakumari, Drew Parker, Ragini Verma, Ahmed Radwan, Stefan Sunaert, Louise Emsell, Alberto De Luca, Alexander Leemans, Claude J. Bajada, Hamied Haroon, Hojjatollah Azadbakht, Maxime Chamberland, Sila Genc, Chantal M.W. Tax, Ping-Hong Yeh, Rujirutana Srikanchana, Colin D. Mcknight, Joseph Yuan-Mou Yang, Jian Chen, Claire E. Kelly, Chun-Hung Yeh, Jerome Cochereau, Jerome J. Maller, Thomas Welton, Fabien Almairac, Kiran K Seunarine, Chris A. Clark, Fan Zhang, Nikos Makris, Alexandra Golby, Yogesh Rathi, Lauren J. O'Donnell, Yihao Xia, Dogu Baran Aydogan, Yonggang Shi, Francisco Guerreiro Fernandes, Mathijs Raemaekers, Shaun Warrington, Stijn Michielse, Alonso Ramírez-Manzanares, Luis Concha, Ramón Aranda, Mariano Rivera Meraz, Garikoitz Lerma-Usabiaga, Lucas Roitman, Lucius S. Fekonja, Navona Calarco, Michael Joseph, Hajer Nakua, Aristotle N. Voineskos, Philippe Karan, Gabrielle Grenier, Jon Haitz Legarreta, Nagesh Adluru, Veena A. Nair, Vivek Prabhakaran, Andrew L. Alexander, Koji Kamagata, Yuya Saito, Wataru Uchida, Christina Andica, Masahiro Abe, Roza G. Bayrak, Claudia A.M. Gandini Wheeler-Kingshott, Egidio D'Angelo, Fulvia Palesi, Giovanni Savini, Nicolò Rolandi, Pamela Guevara, Josselin Houenou, Narciso López-López, Jean-François Mangin, Cyril Poupon, Claudio Román, Andrea Vázquez, Chiara Maffei, Mavilde Arantes, José Paulo Andrade, Susana Maria Silva, Vince D. Calhoun, Eduardo Caverzasi, Simone Sacco, Michael Lauricella, Franco Pestilli, Daniel Bullock, Yang Zhan, Edith Brignoni-Perez, Catherine Lebel, Jess E Reynolds, Igor Nestrasil, René Labounek, Christophe Lenglet, Amy Paulson, Stefania Aulicka, Sarah R. Heilbronner, Katja Heuer, Bramsh Qamar Chandio, Javier Guaje, Wei Tang, Eleftherios Garyfallidis, Rajikha Raja, Adam W. Anderson, Bennett A. Landman, Maxime Descoteaux

Publikováno v: NeuroImage, Vol 243, Iss , Pp 118502- (2021)

White matter bundle segmentation using diffusion MRI fiber tractography has become the method of choice to identify white matter fiber pathways in vivo in human brains. However, like other analyses of complex data, there is considerable variability i

Externí odkaz: https://doaj.org/article/d2f43c7d890749b4be784f2e814a17e8

TractEM: Evaluation of protocols for deterministic tractography white matter atlas

Autor: Cailey I. Kerley, Xuan Wang, François Rheault, Bennett A. Landman, Lori L. Beason-Held, Roza G. Bayrak, Colin B. Hansen, Jasmine M. Greer, Lucas W. Remedios, Baxter P. Rogers, Susan M. Resnick, Justin A. Blaber, Owen A. Williams, Karthik Ramadass, Kurt G. Schilling

Publikováno v: Magn Reson Imaging

Reproducible identification of white matter pathways across subjects is essential for the study of structural connectivity of the human brain. One of the key challenges is anatomical differences between subjects and human rater subjectivity in labeli

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0dc5ad49fbfb91e6d3fad874943eaf9c
https://doi.org/10.1016/j.mri.2021.10.017

From Brain to Body: Learning Low-Frequency Respiration and Cardiac Signals from fMRI Dynamics

Autor: Jorge A. Salas, Nafis Ahmed, Roza G. Bayrak, Yuankai Huo, Catie Chang, Ilwoo Lyu, Colin B. Hansen

Publikováno v: Medical Image Computing and Computer Assisted Intervention – MICCAI 2021 ISBN: 9783030872335
MICCAI (7)

Functional magnetic resonance imaging (fMRI) is a powerful technique for studying human brain activity and large-scale neural circuits. However, fMRI signals can be strongly modulated by slow changes in respiration volume (RV) and heart rate (HR). Mo

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::1115fe755ebbd80f333d981c44190bc9
https://doi.org/10.1007/978-3-030-87234-2_52

A Deep Pattern Recognition Approach for Inferring Respiratory Volume Fluctuations from fMRI Data

Autor: Catie Chang, Yuankai Huo, Jorge A. Salas, Roza G. Bayrak

Publikováno v: Medical Image Computing and Computer Assisted Intervention – MICCAI 2020 ISBN: 9783030597276
MICCAI (7)

Functional magnetic resonance imaging (fMRI) is one of the most widely used non-invasive techniques for investigating human brain activity. Yet, in addition to local neural activity, fMRI signals can be substantially influenced by non-local physiolog

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::26b18fee00c4ff933f21d8e092dcc47c
https://doi.org/10.1007/978-3-030-59728-3_42

Consideration of Cerebrospinal Fluid Intensity Variation in Diffusion Weighted MRI

Autor: Bennett A. Landman, Allison E. Hainline, Vishwesh Nath, Owen A. Williams, Carlo Pierpaoli, Justin A. Blaber, Roza G. Bayrak, Baxter P. Rogers, Prasanna Parvathaneni, Okan Irfanoglu, Lori L. Beason-Held, Adam W. Anderson, Susan M. Resnick, Kurt G. Schilling, Colin B. Hansen

Publikováno v: Proceedings of SPIE--the International Society for Optical Engineering. 10948

Diffusion weighted MRI (DW-MRI) depends on accurate quantification signal intensities that reflect directional apparent diffusion coefficients (ADC). Signal drift and fluctuations during imaging can cause systematic non-linearities that manifest as A

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::70ea0a04e4723a96df5aa56a2fc02426
https://pubmed.ncbi.nlm.nih.gov/31602086