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Report

Deep learning for reconstructing protein structures from cryo-EM density maps: recent advances and future directions

Autor: Giri, Nabin, Roy, Raj S., Cheng, Jianlin

Publikováno v: Current Opinion in Structural Biology Volume 79, April 2023, 102536

Cryo-Electron Microscopy (cryo-EM) has emerged as a key technology to determine the structure of proteins, particularly large protein complexes and assemblies in recent years. A key challenge in cryo-EM data analysis is to automatically reconstruct a

Externí odkaz: http://arxiv.org/abs/2209.08171

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Report

DRLComplex: Reconstruction of protein quaternary structures using deep reinforcement learning

Autor: Soltanikazemi, Elham, Roy, Raj S., Quadir, Farhan, Giri, Nabin, Morehead, Alex, Cheng, Jianlin

Predicted inter-chain residue-residue contacts can be used to build the quaternary structure of protein complexes from scratch. However, only a small number of methods have been developed to reconstruct protein quaternary structures using predicted i

Externí odkaz: http://arxiv.org/abs/2205.13594

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Dissertation/ Thesis

Combining Small Samples of Direct Observations of Passenger Flows with Large Quantities of Automatic Passenger Count Data for Estimating Bus Transit Route Origin-Destination Flows

Autor: Roy, Raj

The Iterative Proportional Fitting (IPF) method represents the state-of-the-practice for estimating bus route-level passenger OD flow matrices. It requires boarding and alighting volumes along with a seed matrix as inputs. Although the “Null” mat

Externí odkaz: http://rave.ohiolink.edu/etdc/view?acc_num=osu16297059007711

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