Zobrazeno 1 - 10
of 391
pro vyhledávání: '"Ross C Walker"'
Autor:
Dillion M Fox, Christopher M MacDermaid, Andrea M A Schreij, Magdalena Zwierzyna, Ross C Walker
Publikováno v:
PLoS Computational Biology, Vol 18, Iss 4, p e1010032 (2022)
The 3-dimensional fold of an RNA molecule is largely determined by patterns of intramolecular hydrogen bonds between bases. Predicting the base pairing network from the sequence, also referred to as RNA secondary structure prediction or RNA folding,
Externí odkaz:
https://doaj.org/article/deef695ad64d4f97b4a98a650196faa2
Publikováno v:
PLoS ONE, Vol 16, Iss 10 (2021)
Reverse translation of polypeptide sequences to expressible mRNA constructs is a NP-hard combinatorial optimization problem. Each amino acid in the protein sequence can be represented by as many as six codons, and the process of selecting the combina
Externí odkaz:
https://doaj.org/article/9fa14a0d79ff4692a9f1153e28be771b
Publikováno v:
ACS Central Science, Vol 2, Iss 10, Pp 756-763 (2016)
Externí odkaz:
https://doaj.org/article/97e657e0acd8430d803137aa6503b94a
Autor:
Longhua Yang, Åge A. Skjevik, Wen-Ge Han Du, Louis Noodleman, Ross C. Walker, Andreas W. Götz
Publikováno v:
Data in Brief, Vol 8, Iss , Pp 1209-1214 (2016)
Cytochrome c oxidase (CcO) is a vital enzyme that catalyzes the reduction of molecular oxygen to water and pumps protons across mitochondrial and bacterial membranes. This article presents parameters for the cofactors of ba3-type CcO that are compati
Externí odkaz:
https://doaj.org/article/cfa3a26d48f44cc39db2d857fee1c3f1
Publikováno v:
Journal of Chemical Theory and Computation. 18:1726-1736
We extend the modular AMBER lipid force field to include anionic lipids, polyunsaturated fatty acid (PUFA) lipids, and sphingomyelin, allowing the simulation of realistic cell membrane lipid compositions, including raft-like domains. Head group torsi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::18862d0af111c343fe844e09250b49bb
https://doi.org/10.1021/acs.jctc.1c01217
https://doi.org/10.1021/acs.jctc.1c01217
Autor:
Alexis Eichhorn, Payton Walters, James Biggerstaff, S. Stewart, Noha H. Youssef, Chelsea L. Murphy, Diana Soriano, Essences Ewing, Kaitlynn VanMol, Ryan Shahan, Mostafa S. Elshahed, Ross C. Walker
Publikováno v:
Environmental Microbiology. 23:4326-4343
An overwhelming majority of bacterial life remains uncharacterized. Recent efforts to assemble genomes from metagenomes have provided invaluable insights into these yet-uncultured bacterial lineages. We report on the characterization of 30 genomes be
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b4a9f5d5373af14aa3e7393f380e3472
https://doi.org/10.1111/1462-2920.15614
https://doi.org/10.1111/1462-2920.15614
Reverse translation of polypeptide sequences to expressible mRNA constructs is a NP-hard combinatorial optimization problem. Each amino acid in the protein sequence can be represented by as many as six codons, and the process of selecting the combina
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::1c18996109c4f7acadc1af5144ae933a
https://doi.org/10.1101/2021.02.19.431999
https://doi.org/10.1101/2021.02.19.431999
Publikováno v:
PLoS ONE, Vol 16, Iss 10, p e0259101 (2021)
PLoS ONE, Vol 16, Iss 10 (2021)
PLoS ONE
PLoS ONE, Vol 16, Iss 10 (2021)
PLoS ONE
Reverse translation of polypeptide sequences to expressible mRNA constructs is a NP-hard combinatorial optimization problem. Each amino acid in the protein sequence can be represented by as many as six codons, and the process of selecting the combina
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ac1e2e717f63ca49a124cc9ccc755781
https://doaj.org/article/013f6a0582994918a5bcad4764693e16
https://doaj.org/article/013f6a0582994918a5bcad4764693e16
Publikováno v:
PLOS Computational Biology. 18:e1010032
The 3-dimensional fold of an RNA molecule is largely determined by patterns of intramolecular hydrogen bonds between bases. Predicting the base pairing network from the sequence, also referred to as RNA secondary structure prediction or RNA folding,
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bf5e41e4becf97f38e5225c7adc009c4
https://doi.org/10.1371/journal.pcbi.1010032
https://doi.org/10.1371/journal.pcbi.1010032
Autor:
Sulyman Barkho, Levi C T Pierce, Maria L McGlone, Sheng Li, Virgil L Woods, Ross C Walker, Joseph A Adams, Patricia A Jennings
Publikováno v:
PLoS Computational Biology, Vol 9, Iss 9, p e1003188 (2013)
The Src family of tyrosine kinases (SFKs) regulate numerous aspects of cell growth and differentiation and are under the principal control of the C-terminal Src Kinase (Csk). Csk and SFKs share a modular design with the kinase domain downstream of th
Externí odkaz:
https://doaj.org/article/bfbd58ccdb684fed88493358920fc89e