Zobrazeno 1 - 10
of 63
pro vyhledávání: '"Rondi A. Butler"'
Autor:
Lucas A. Salas, Ze Zhang, Devin C. Koestler, Rondi A. Butler, Helen M. Hansen, Annette M. Molinaro, John K. Wiencke, Karl T. Kelsey, Brock C. Christensen
Publikováno v:
Nature Communications, Vol 13, Iss 1, Pp 1-13 (2022)
Deconvolution algorithms facilitate studying cell type-specific changes using bulk data from complex tissues. Here, the authors present a deconvolution method that predicts DNA methylation levels in 12 leukocyte subtypes using human microarray data a
Externí odkaz:
https://doaj.org/article/ccebbe6ed99f41e78e9a2e3097b42b84
Autor:
Lucas A. Salas, Devin C. Koestler, Rondi A. Butler, Helen M. Hansen, John K. Wiencke, Karl T. Kelsey, Brock C. Christensen
Publikováno v:
Genome Biology, Vol 19, Iss 1, Pp 1-14 (2018)
Abstract Genome-wide methylation arrays are powerful tools for assessing cell composition of complex mixtures. We compare three approaches to select reference libraries for deconvoluting neutrophil, monocyte, B-lymphocyte, natural killer, and CD4+ an
Externí odkaz:
https://doaj.org/article/8b5788e1f1324171bccea1db1a1e98bd
Autor:
Karl T. Kelsey, Heather H. Nelson, Shichun Zheng, Rondi A. Butler, E. Andres Houseman, John K. Wiencke, William P. Accomando
PDF file - 48K, Demethylation of a DNA region in NKp46 in control and HNSCC patient bloods assessed by qMSP
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3b03a8603da4ca9438452b27be9fb219
https://doi.org/10.1158/1078-0432.22447760
https://doi.org/10.1158/1078-0432.22447760
Autor:
Karl T. Kelsey, Heather H. Nelson, Shichun Zheng, Rondi A. Butler, E. Andres Houseman, John K. Wiencke, William P. Accomando
PDF file - 48K, Results of the NKp46 demethylation assay performed on HNSCC patient bloods stratified by tumor stage
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e4545e30f2f1fc2b06e303d15cc3eb6e
https://doi.org/10.1158/1078-0432.22447754.v1
https://doi.org/10.1158/1078-0432.22447754.v1
Autor:
Karl T. Kelsey, Carmen J. Marsit, Michael Pawlita, Tim Waterboer, Michael D. McClean, Michele Avissar-Whiting, Rondi A. Butler, Brock C. Christensen, E. Andres Houseman, Graham M. Poage
Supplementary Table S1 from Global Hypomethylation Identifies Loci Targeted for Hypermethylation in Head and Neck Cancer
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4681ff5a2922f8370e32e07a4460614e
https://doi.org/10.1158/1078-0432.22442132.v1
https://doi.org/10.1158/1078-0432.22442132.v1
Autor:
Karl T. Kelsey, Heather H. Nelson, Shichun Zheng, Rondi A. Butler, E. Andres Houseman, John K. Wiencke, William P. Accomando
PDF file - 60K, Bisulfite pyrosequencing of isolated human leukocytes
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b9a24a043c35205039cc719585e03299
https://doi.org/10.1158/1078-0432.22447766
https://doi.org/10.1158/1078-0432.22447766
Autor:
Karl T. Kelsey, Heather H. Nelson, Shichun Zheng, Rondi A. Butler, E. Andres Houseman, John K. Wiencke, William P. Accomando
PDF file - 48K, Results of the NKp46 demethylation assay performed on HNSCC patient bloods stratified by tumor site
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bbf1377a8c3cb5ebec9621639cba19a7
https://doi.org/10.1158/1078-0432.22447757
https://doi.org/10.1158/1078-0432.22447757
Autor:
Karl T. Kelsey, Heather H. Nelson, Shichun Zheng, Rondi A. Butler, E. Andres Houseman, John K. Wiencke, William P. Accomando
Purpose: Natural killer (NK) cells are a key element of the innate immune system implicated in human cancer. To examine NK cell levels in archived bloods from a study of human head and neck squamous cell carcinoma (HNSCC), a new DNA-based quantificat
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f6239e69d882425352de7537848f18c9
https://doi.org/10.1158/1078-0432.c.6521198
https://doi.org/10.1158/1078-0432.c.6521198
Autor:
Karl T. Kelsey, Carmen J. Marsit, Michael Pawlita, Tim Waterboer, Michael D. McClean, Michele Avissar-Whiting, Rondi A. Butler, Brock C. Christensen, E. Andres Houseman, Graham M. Poage
Purpose: The human epigenome is profoundly altered in cancers, with a characteristic loss of methylation in repetitive regions and concomitant accumulation of gene promoter methylation. The degree to which these processes are coordinated is unclear s
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::02e00abcac2ae097ccdf47818ae4c87e
https://doi.org/10.1158/1078-0432.c.6518939
https://doi.org/10.1158/1078-0432.c.6518939
Autor:
Karl T. Kelsey, Heather H. Nelson, Shichun Zheng, Rondi A. Butler, E. Andres Houseman, John K. Wiencke, William P. Accomando
PDF file - 71K, Oligonucleotide sequences
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::273141e213762dfeb1e2f3e0515f386c
https://doi.org/10.1158/1078-0432.22447745
https://doi.org/10.1158/1078-0432.22447745