Improved detection of methylation in ancient DNA

Autor: Susanna Sawyer, Pere Gelabert, Benjamin Yakir, Alejandro Llanos-Lizcano, Alessandra Sperduti, Luca Bondioli, Olivia Cheronet, Christine Neugebauer-Maresch, Maria Teschler-Nicola, Mario Novak, Ildikó Pap, Ildikó Szikossy, Tamás Hajdu, Vyacheslav Moiseyev, Andrey Gromov, Gunita Zariņa, Eran Meshorer, Liran Carmel, Ron Pinhasi

Publikováno v: Genome Biology, Vol 25, Iss 1, Pp 1-23 (2024)

Abstract Reconstructing premortem DNA methylation levels in ancient DNA has led to breakthrough studies such as the prediction of anatomical features of the Denisovan. These studies rely on computationally inferring methylation levels from damage sig

Externí odkaz: https://doaj.org/article/02bbf141ab6b403e817691f1389c919c

Cervidae antlers exploited to manufacture prehistoric tools and hunting implements as a reliable source of ancient DNA

Autor: José-Miguel Tejero, Olivia Cheronet, Pere Gelabert, Brina Zagorc, Esteban Álvarez-Fernández, Pablo Arias, Aline Averbouh, Guy Bar-Oz, Omry Barzilai, Anna Belfer-Cohen, Marjolein D. Bosch, Florian Brück, Marián Cueto, Martin Dockner, Josep Maria Fullola, Diego Gárate, Michael Giannakoulis, Cynthia González, Nino Jakeli, Xavier Mangado, Tengiz Meshveliani, Petr Neruda, Philip Nigst, Roberto Ontañón, Maayan Shemer, Petra G. Šimková, Jesús Tapia, Marta Sánchez de la Torre, Catherine Schwab, Gerhard Weber, Ron Pinhasi

Publikováno v: Heliyon, Vol 10, Iss 11, Pp e31858- (2024)

Antler is one of the primary animal raw materials exploited for technical purposes by the hunter-gatherer groups of the Eurasian Upper Palaeolithic (UP) all over the ecological range of deers, and beyond. It was exhaustively employed to produce one o

Externí odkaz: https://doaj.org/article/b80636a44f164fff93aa6bd75e662f7a

Stable population structure in Europe since the Iron Age, despite high mobility

Autor: Margaret L Antonio, Clemens L Weiß, Ziyue Gao, Susanna Sawyer, Victoria Oberreiter, Hannah M Moots, Jeffrey P Spence, Olivia Cheronet, Brina Zagorc, Elisa Praxmarer, Kadir Toykan Özdoğan, Lea Demetz, Pere Gelabert, Daniel Fernandes, Michaela Lucci, Timka Alihodžić, Selma Amrani, Pavel Avetisyan, Christèle Baillif-Ducros, Željka Bedić, Audrey Bertrand, Maja Bilić, Luca Bondioli, Paulina Borówka, Emmanuel Botte, Josip Burmaz, Domagoj Bužanić, Francesca Candilio, Mirna Cvetko, Daniela De Angelis, Ivan Drnić, Kristián Elschek, Mounir Fantar, Andrej Gaspari, Gabriella Gasperetti, Francesco Genchi, Snežana Golubović, Zuzana Hukeľová, Rimantas Jankauskas, Kristina Jelinčić Vučković, Gordana Jeremić, Iva Kaić, Kevin Kazek, Hamazasp Khachatryan, Anahit Khudaverdyan, Sylvia Kirchengast, Miomir Korać, Valérie Kozlowski, Mária Krošláková, Dora Kušan Špalj, Francesco La Pastina, Marie Laguardia, Sandra Legrand, Tino Leleković, Tamara Leskovar, Wiesław Lorkiewicz, Dženi Los, Ana Maria Silva, Rene Masaryk, Vinka Matijević, Yahia Mehdi Seddik Cherifi, Nicolas Meyer, Ilija Mikić, Nataša Miladinović-Radmilović, Branka Milošević Zakić, Lina Nacouzi, Magdalena Natuniewicz-Sekuła, Alessia Nava, Christine Neugebauer-Maresch, Jan Nováček, Anna Osterholtz, Julianne Paige, Lujana Paraman, Dominique Pieri, Karol Pieta, Stefan Pop-Lazić, Matej Ruttkay, Mirjana Sanader, Arkadiusz Sołtysiak, Alessandra Sperduti, Tijana Stankovic Pesterac, Maria Teschler-Nicola, Iwona Teul, Domagoj Tončinić, Julien Trapp, Dragana Vulović, Tomasz Waliszewski, Diethard Walter, Miloš Živanović, Mohamed el Mostefa Filah, Morana Čaušević-Bully, Mario Šlaus, Dušan Borić, Mario Novak, Alfredo Coppa, Ron Pinhasi, Jonathan K Pritchard

Publikováno v: eLife, Vol 13 (2024)

Ancient DNA research in the past decade has revealed that European population structure changed dramatically in the prehistoric period (14,000–3000 years before present, YBP), reflecting the widespread introduction of Neolithic farmer and Bronze Ag

Externí odkaz: https://doaj.org/article/6ced7b983ff645a087276733ba254719

Stable carbon and nitrogen isotopes identify nuanced dietary changes from the Bronze and Iron Ages on the Great Hungarian Plain

Autor: Ashley McCall, Beatriz Gamarra, Kellie Sara Duffett Carlson, Zsolt Bernert, Andrea Cséki, Piroska Csengeri, László Domboróczki, Anna Endrődi, Magdolna Hellebrandt, Antónia Horváth, Ágnes Király, Krisztián Kiss, Judit Koós, Péter Kovács, Kitti Köhler, László Szolnoki, Zsuzsanna K. Zoffmann, Kendra Sirak, Tamás Szeniczey, János Dani, Tamás Hajdu, Ron Pinhasi

Publikováno v: Scientific Reports, Vol 12, Iss 1, Pp 1-14 (2022)

Abstract The Great Hungarian Plain (GHP) served as a geographic funnel for population mobility throughout prehistory. Genomic and isotopic research demonstrates non-linear genetic turnover and technological shifts between the Copper and Iron Ages of

Externí odkaz: https://doaj.org/article/97118319849c46e78a966c20fa1a108c

Social stratification without genetic differentiation at the site of Kulubnarti in Christian Period Nubia

Autor: Kendra A. Sirak, Daniel M. Fernandes, Mark Lipson, Swapan Mallick, Matthew Mah, Iñigo Olalde, Harald Ringbauer, Nadin Rohland, Carla S. Hadden, Éadaoin Harney, Nicole Adamski, Rebecca Bernardos, Nasreen Broomandkhoshbacht, Kimberly Callan, Matthew Ferry, Ann Marie Lawson, Megan Michel, Jonas Oppenheimer, Kristin Stewardson, Fatma Zalzala, Nick Patterson, Ron Pinhasi, Jessica C. Thompson, Dennis Van Gerven, David Reich

Publikováno v: Nature Communications, Vol 12, Iss 1, Pp 1-14 (2021)

Little is known about the genetic landscape of people living in the Nile region prior to the Islamic migrations of the late 1st millennium CE. Here, the authors report genome-wide data for 66 ancient individuals to investigate the genetic ancestry of

Externí odkaz: https://doaj.org/article/7ab5d169694645f19daf803054db3508