Single-cell genomics-based analysis reveals a vital ecological role of Thiocapsa sp. LSW in the meromictic Lake Shunet, Siberia.

Autor: Wu YT; Department of Forestry, National Pingtung University of Science and Technology, Pingtung 91201, Taiwan, ROC., Chiang PW; Biodiversity Research Center, Academia Sinica, Taipei 115, Taiwan, ROC., Tandon K; Biodiversity Research Center, Academia Sinica, Taipei 115, Taiwan, ROC., Rogozin DY; Institute of Biophysics, Siberian Division of the Russian Academy of Sciences, Krasnoyarsk, Russia.; Siberian Federal University, Krasnoyarsk, Russia., Degermendzhy AG; Institute of Biophysics, Siberian Division of the Russian Academy of Sciences, Krasnoyarsk, Russia., Tang SL; Biodiversity Research Center, Academia Sinica, Taipei 115, Taiwan, ROC.

Publikováno v: Microbial genomics [Microb Genom] 2021 Dec; Vol. 7 (12).

Global data set of long-term summertime vertical temperature profiles in 153 lakes.

Autor: Pilla RM; Miami University, Department of Biology, Oxford, Ohio, USA. pillarm@miamioh.edu., Mette EM; Miami University, Department of Biology, Oxford, Ohio, USA., Williamson CE; Miami University, Department of Biology, Oxford, Ohio, USA., Adamovich BV; Belarusian State University, Faculty of Biology, Minsk, Belarus., Adrian R; Leibniz-Institute of Freshwater Ecology and Inland Fisheries, Department of Ecosystem Research, Berlin, Germany., Anneville O; INRAE, University of Savoie Mont-Blanc, CARRTEL, Thonon-les-Bains, France., Balseiro E; University of Comahue: INIBIOMA, CONICET, Neuquén, Argentina., Ban S; University of Shiga Prefecture, Hikone, Shiga, Japan., Chandra S; University of Nevada, Reno, Global Water Center, Reno, Nevada, USA., Colom-Montero W; Uppsala University, Department of Ecology and Genetics/Limnology, Uppsala, Sweden., Devlin SP; University of Montana, Flathead Lake Biological Station, Polson, Montana, USA., Dix MA; Universidad del Valle de Guatemala Centro de Estudios Atitlan, Guatemala, Guatemala., Dokulil MT; University of Innsbruck, Research Department for Limnology Mondsee, Mondsee, Austria., Feldsine NA; Mohonk Preserve, Daniel Smiley Research Center, New Paltz, New York, USA., Feuchtmayr H; UK Centre for Ecology & Hydrology, Lake Ecosystems Group, Lancaster, UK., Fogarty NK; Seqwater, Ipswich, QLD, Australia., Gaiser EE; Florida International University, Department of Biological Sciences and Institute of Environment, Miami, Florida, USA., Girdner SF; U.S. National Park Service, Crater Lake National Park, Crater Lake, Oregon, USA., González MJ; Miami University, Department of Biology, Oxford, Ohio, USA., Hambright KD; University of Oklahoma, Department of Biology, Norman, Oklahoma, USA., Hamilton DP; Griffith University, Australian Rivers Institute, Nathan, Australia., Havens K; University of Florida, Gainesville, Florida, USA., Hessen DO; University of Oslo, Department of Biosciences, Oslo, Norway., Hetzenauer H; LUBW Landesanstalt für Umwelt, Messungen und Naturschutz Baden-Württemberg, Institut für Seenforschung, Langenargen, Germany., Higgins SN; IISD Experimental Lake Area Inc., Winnipeg, Manitoba, Canada., Huttula TH; FAO, BELSPO, Brussels, Belgium., Huuskonen H; University of Eastern Finland, Department of Environmental and Biological Sciences, Joensuu, Finland., Isles PDF; Swiss Federal Institute of Aquatic Science and Technology, Department of Aquatic Ecology, Dübendorf, Switzerland., Joehnk KD; CSIRO, Land and Water, Canberra, Australia., Keller WB; Laurentian University, Cooperative Freshwater Ecology Unit, Sudbury, Ontario, Canada., Klug J; Fairfield University, Biology Department, Fairfield, Connecticut, USA., Knoll LB; University of Minnesota, Itasca Biological Station and Laboratories, Lake Itasca, Minnesota, USA., Korhonen J; Finnish Environment Institute SYKE, Freshwater Center, Helsinki, Finland., Korovchinsky NM; A.N. Severtsov Institute of Ecology and Evolution of The Russian Academy of Sciences, Laboratory of Ecology of Water Communities and Invasions, Moscow, Russia., Köster O; Zurich Water Supply, City of Zurich, Zurich, Switzerland., Kraemer BM; Leibniz-Institute of Freshwater Ecology and Inland Fisheries, Department of Ecosystem Research, Berlin, Germany., Leavitt PR; University of Regina, Institute of Environmental Change and Society, Regina, Saskatchewan, Canada., Leoni B; Milano-Bicocca University, Milan, Italy., Lepori F; University of Applied Sciences and Arts of Southern Switzerland, Department for Environment, Constructions and Design, Canobbio, Switzerland., Lepskaya EV; Kamchatka Research Institute of Fisheries & Oceanography, now Kamchatka Branch of Russian Federal Research Institute of Fisheries and Oceanography, Petropavlovsk-Kamchatsky, Russia., Lottig NR; University of Wisconsin, Center for Limnology, Boulder Junction, Wisconsin, USA., Luger MS; Federal Agency for Water Management, Institute for Aquatic Ecology and Fisheries Management, Mondsee, Austria., Maberly SC; UK Centre for Ecology & Hydrology, Lake Ecosystems Group, Lancaster, UK., MacIntyre S; University of California Santa Barbara, Department of Ecology, Evolution and Marine Biology, Santa Barbara, California, USA., McBride C; University of Waikato, Environmental Research Institute, Hamilton, New Zealand., McIntyre P; University of Wisconsin, Center for Limnology, Boulder Junction, Wisconsin, USA., Melles SJ; Ryerson University, Department of Chemistry and Biology, Toronto, Ontario, Canada., Modenutti B; University of Comahue: INIBIOMA, CONICET, Neuquén, Argentina., Müller-Navarra DC; University of Hamburg, Department of Biology, Hamburg, Germany., Pacholski L; Dominion Diamond Mines, Environment Department, Calgary, Alberta, Canada., Paterson AM; Ontario Ministry of the Environment, Conservation and Parks, Dorset Environmental Science Centre, Dorset, Ontario, Canada., Pierson DC; Uppsala University, Department of Ecology and Genetics/Limnology, Uppsala, Sweden., Pislegina HV; Irkutsk State University, Institute of Biology, Irkutsk, Russia., Plisnier PD; University of Liège, Chemical Oceanography Unit, Institut de Physique (B5A), Liège, Belgium., Richardson DC; SUNY New Paltz, Biology Department, New Paltz, New York, USA., Rimmer A; The Kinneret Limnological Laboratory, Israel Oceanographic and Limnological Research, Migdal, Israel., Rogora M; CNR Water Research institute, Verbania, Verbania, Pallanza, Italy., Rogozin DY; Krasnoyarsk Scientific Center SB RAS, Institute of Biophysics, Krasnoyarsk, Russia., Rusak JA; Ontario Ministry of the Environment, Conservation and Parks, Dorset Environmental Science Centre, Dorset, Ontario, Canada., Rusanovskaya OO; Irkutsk State University, Institute of Biology, Irkutsk, Russia., Sadro S; University of California Davis, Department of Environmental Science and Policy, Davis, California, USA., Salmaso N; Fondazione Edmund Mach, Research and Innovation Centre, San Michele all'Adige, Italy., Saros JE; University of Maine, Climate Change Institute, Orono, Maine, USA., Sarvala J; University of Turku, Turku, Finland., Saulnier-Talbot É; Université Laval, Departments of Biology and Geography, Québec, Canada., Schindler DE; University of Washington, School of Aquatic and Fishery Sciences, Seattle, Washington, USA., Shimaraeva SV; Irkutsk State University, Institute of Biology, Irkutsk, Russia., Silow EA; Irkutsk State University, Institute of Biology, Irkutsk, Russia., Sitoki LM; The Technical University of Kenya, Department of Geosciences and the Environment, Nairobi, Kenya., Sommaruga R; University of Innsbruck, Department of Ecology, Innsbruck, Austria., Straile D; University of Konstanz, Limnological Institute, Konstanz, Germany., Strock KE; Dickinson College, Department of Environmental Science, Carlisle, Pennsylvania, USA., Swain H; Archbold Biological Station, Venus, Florida, USA., Tallant JM; University of Michigan, Biological Station, Pellston, Michigan, USA., Thiery W; Vrije Universiteit Brussel, Department of Hydrology and Hydraulic Engineering, Brussels, Belgium.; ETH Zurich, Institute for Atmospheric and Climate Science, Zurich, Switzerland., Timofeyev MA; Irkutsk State University, Institute of Biology, Irkutsk, Russia., Tolomeev AP; Krasnoyarsk Scientific Center SB RAS, Institute of Biophysics, Krasnoyarsk, Russia., Tominaga K; University of Oslo, Department of Biosciences, Oslo, Norway., Vanni MJ; Miami University, Department of Biology, Oxford, Ohio, USA., Verburg P; National Institute of Water & Atmospheric Research, Hamilton, New Zealand., Vinebrooke RD; University of Alberta, Department of Biological Sciences, Edmonton, Alberta, Canada., Wanzenböck J; University of Innsbruck, Research Department for Limnology Mondsee, Mondsee, Austria., Weathers K; Cary Institute of Ecosystem Studies, Millbrook, New York, USA., Weyhenmeyer GA; Uppsala University, Department of Ecology and Genetics/Limnology, Uppsala, Sweden., Zadereev ES; Krasnoyarsk Scientific Center SB RAS, Institute of Biophysics, Krasnoyarsk, Russia., Zhukova TV; Belarusian State University, Faculty of Biology, Minsk, Belarus.

Publikováno v: Scientific data [Sci Data] 2021 Aug 04; Vol. 8 (1), pp. 200. Date of Electronic Publication: 2021 Aug 04.

Methanolobus halotolerans sp. nov., isolated from the saline Lake Tus in Siberia.

Autor: Shen Y; Department of Life Science, National Chung Hsing University, Taiwan, ROC., Chen SC; Department of Life Science, National Chung Hsing University, Taiwan, ROC.; Fujian Provincial Key Laboratory of Resources and Environmental Monitoring and Sustainable Management and Utilization, Sanming University, Sanming, Fujian 365004, PR China.; School of Resources and Chemical Engineering, Sanming University, Sanming, Fujian 365004, PR China., Lai MC; Department of Life Science, National Chung Hsing University, Taiwan, ROC.; Agricultural Biotechnology Center, National Chung Hsing University, Taiwan, ROC., Huang HH; Department of Life Science, National Chung Hsing University, Taiwan, ROC., Chiu HH; Biodiversity Research Center, Academia Sinica, Taiwan, ROC., Tang SL; Biodiversity Research Center, Academia Sinica, Taiwan, ROC., Rogozin DY; Siberian Federal University, Krasnoyarsk 660041, Russia.; Institute of Biophysics Siberian Branch of Russian Academy of Sciences, Krasnoyarsk 660036, Russia., Degermendzhy AG; Siberian Federal University, Krasnoyarsk 660041, Russia.; Institute of Biophysics Siberian Branch of Russian Academy of Sciences, Krasnoyarsk 660036, Russia.

Publikováno v: International journal of systematic and evolutionary microbiology [Int J Syst Evol Microbiol] 2020 Oct; Vol. 70 (10), pp. 5586-5593. Date of Electronic Publication: 2020 Sep 11.

Dancing the Nanopore limbo – Nanopore metagenomics from small DNA quantities for bacterial genome reconstruction.

Autor: Simon, Sophie A.¹ (AUTHOR) sophie.simon@uni-due.de, Schmidt, Katharina¹ (AUTHOR), Griesdorn, Lea¹ (AUTHOR), Soares, André R.^1,2 (AUTHOR), Bornemann, Till L. V.^1,2 (AUTHOR), Probst, Alexander J.^1,2 (AUTHOR) alexander.probst@uni-due.de

Publikováno v: BMC Genomics. 12/1/2023, Vol. 24 Issue 1, p1-11. 11p.

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