Zobrazeno 1 - 10
of 64
pro vyhledávání: '"Roeland C H J, van Ham"'
Autor:
Bas Van Stein, Elena Raponi, Zahra Sadeghi, Niek Bouman, Roeland C. H. J. Van Ham, Thomas Back
Publikováno v:
IEEE Access, Vol 10, Pp 103364-103381 (2022)
Explainable Artificial Intelligence (XAI) is an increasingly important field of research required to bring AI to the next level in real-world applications. Global sensitivity analysis (GSA) methods play an important role in XAI, as they can provide a
Externí odkaz:
https://doaj.org/article/912602b853f048eea9e8c199e54528ad
Publikováno v:
Genes, Vol 11, Iss 11, p 1264 (2020)
The current rate at which new DNA and protein sequences are being generated is too fast to experimentally discover the functions of those sequences, emphasizing the need for accurate Automatic Function Prediction (AFP) methods. AFP has been an active
Externí odkaz:
https://doaj.org/article/8109b55759454c1a9e21bd3707c5edc0
Autor:
Pierre J G M de Wit, Ate van der Burgt, Bilal Ökmen, Ioannis Stergiopoulos, Kamel A Abd-Elsalam, Andrea L Aerts, Ali H Bahkali, Henriek G Beenen, Pranav Chettri, Murray P Cox, Erwin Datema, Ronald P de Vries, Braham Dhillon, Austen R Ganley, Scott A Griffiths, Yanan Guo, Richard C Hamelin, Bernard Henrissat, M Shahjahan Kabir, Mansoor Karimi Jashni, Gert Kema, Sylvia Klaubauf, Alla Lapidus, Anthony Levasseur, Erika Lindquist, Rahim Mehrabi, Robin A Ohm, Timothy J Owen, Asaf Salamov, Arne Schwelm, Elio Schijlen, Hui Sun, Harrold A van den Burg, Roeland C H J van Ham, Shuguang Zhang, Stephen B Goodwin, Igor V Grigoriev, Jérôme Collemare, Rosie E Bradshaw
Publikováno v:
PLoS Genetics, Vol 11, Iss 12, p e1005775 (2015)
Externí odkaz:
https://doaj.org/article/d05a43f02f034447939ce6ceaa396750
Autor:
Felipe Leal Valentim, Simon van Mourik, David Posé, Min C Kim, Markus Schmid, Roeland C H J van Ham, Marco Busscher, Gabino F Sanchez-Perez, Jaap Molenaar, Gerco C Angenent, Richard G H Immink, Aalt D J van Dijk
Publikováno v:
PLoS ONE, Vol 10, Iss 2, p e0116973 (2015)
Various environmental signals integrate into a network of floral regulatory genes leading to the final decision on when to flower. Although a wealth of qualitative knowledge is available on how flowering time genes regulate each other, only a few stu
Externí odkaz:
https://doaj.org/article/af390de60ca5470ab56ad8ff3fe02392
Autor:
Angel M. Gomez, Roeland C. H. J. van Ham, Amelia Villegas-Morcillo, Victoria E. Sánchez, Stavros Makrodimitris, Marcel J. T. Reinders
Publikováno v:
Digibug: Repositorio Institucional de la Universidad de Granada
Universidad de Granada (UGR)
Bioinformatics
Bioinformatics, 37(2)
Digibug. Repositorio Institucional de la Universidad de Granada
instname
Universidad de Granada (UGR)
Bioinformatics
Bioinformatics, 37(2)
Digibug. Repositorio Institucional de la Universidad de Granada
instname
This work was supported by Keygene N.V., a crop innovation company in the Netherlands and by the Spanish MINECO/FEDER Project TEC201680141-P with the associated FPI grant BES-2017-079792.
The authors thank Dr. Elvin Isufi and Chirag Raman for th
The authors thank Dr. Elvin Isufi and Chirag Raman for th
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3fb821b61244702a2612025188e59b11
http://hdl.handle.net/10481/69200
http://hdl.handle.net/10481/69200
Publikováno v:
PLoS ONE, Vol 7, Iss 1, p e30591 (2012)
Mutational robustness of gene regulatory networks refers to their ability to generate constant biological output upon mutations that change network structure. Such networks contain regulatory interactions (transcription factor-target gene interaction
Externí odkaz:
https://doaj.org/article/01bb09ed88bb42f0a1953deeb22cc87d
Autor:
Pierre J G M de Wit, Ate van der Burgt, Bilal Ökmen, Ioannis Stergiopoulos, Kamel A Abd-Elsalam, Andrea L Aerts, Ali H Bahkali, Henriek G Beenen, Pranav Chettri, Murray P Cox, Erwin Datema, Ronald P de Vries, Braham Dhillon, Austen R Ganley, Scott A Griffiths, Yanan Guo, Richard C Hamelin, Bernard Henrissat, M Shahjahan Kabir, Mansoor Karimi Jashni, Gert Kema, Sylvia Klaubauf, Alla Lapidus, Anthony Levasseur, Erika Lindquist, Rahim Mehrabi, Robin A Ohm, Timothy J Owen, Asaf Salamov, Arne Schwelm, Elio Schijlen, Hui Sun, Harrold A van den Burg, Roeland C H J van Ham, Shuguang Zhang, Stephen B Goodwin, Igor V Grigoriev, Jérôme Collemare, Rosie E Bradshaw
Publikováno v:
PLoS Genetics, Vol 8, Iss 11, p e1003088 (2012)
We sequenced and compared the genomes of the Dothideomycete fungal plant pathogens Cladosporium fulvum (Cfu) (syn. Passalora fulva) and Dothistroma septosporum (Dse) that are closely related phylogenetically, but have different lifestyles and hosts.
Externí odkaz:
https://doaj.org/article/d45bff0bcd374dae9aff246e4b1ca7fd
Autor:
Edouard I Severing, Aalt D J van Dijk, Giuseppa Morabito, Jacqueline Busscher-Lange, Richard G H Immink, Roeland C H J van Ham
Publikováno v:
PLoS ONE, Vol 7, Iss 1, p e30524 (2012)
Several genome-wide studies demonstrated that alternative splicing (AS) significantly increases the transcriptome complexity in plants. However, the impact of AS on the functional diversity of proteins is difficult to assess using genome-wide approac
Externí odkaz:
https://doaj.org/article/dc90fa1440c64641809941284fb57a6a
MotivationPhysical interaction between two proteins is strong evidence that the proteins are involved in the same biological process, making Protein-Protein Interaction (PPI) networks a valuable data resource for predicting the cellular functions of
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::40fb1c4e0ce5e7ea1a6a97d417ca1b10
https://doi.org/10.1101/832253
https://doi.org/10.1101/832253
Autor:
Stephen B Goodwin, Sarrah Ben M'barek, Braham Dhillon, Alexander H J Wittenberg, Charles F Crane, James K Hane, Andrew J Foster, Theo A J Van der Lee, Jane Grimwood, Andrea Aerts, John Antoniw, Andy Bailey, Burt Bluhm, Judith Bowler, Jim Bristow, Ate van der Burgt, Blondy Canto-Canché, Alice C L Churchill, Laura Conde-Ferràez, Hans J Cools, Pedro M Coutinho, Michael Csukai, Paramvir Dehal, Pierre De Wit, Bruno Donzelli, Henri C van de Geest, Roeland C H J van Ham, Kim E Hammond-Kosack, Bernard Henrissat, Andrzej Kilian, Adilson K Kobayashi, Edda Koopmann, Yiannis Kourmpetis, Arnold Kuzniar, Erika Lindquist, Vincent Lombard, Chris Maliepaard, Natalia Martins, Rahim Mehrabi, Jan P H Nap, Alisa Ponomarenko, Jason J Rudd, Asaf Salamov, Jeremy Schmutz, Henk J Schouten, Harris Shapiro, Ioannis Stergiopoulos, Stefano F F Torriani, Hank Tu, Ronald P de Vries, Cees Waalwijk, Sarah B Ware, Ad Wiebenga, Lute-Harm Zwiers, Richard P Oliver, Igor V Grigoriev, Gert H J Kema
Publikováno v:
PLoS Genetics, Vol 7, Iss 6, p e1002070 (2011)
The plant-pathogenic fungus Mycosphaerella graminicola (asexual stage: Septoria tritici) causes septoria tritici blotch, a disease that greatly reduces the yield and quality of wheat. This disease is economically important in most wheat-growing areas
Externí odkaz:
https://doaj.org/article/810b8a63930e4e278d2fbf622f1808d3