Zobrazeno 1 - 10
of 19
pro vyhledávání: '"Robert Setterquist"'
Autor:
Emily Zeringer, Timothy Barta, G. Joel DeCastro, Alexander V. Vlassov, Robert Setterquist, Alex J. Rai, Susan Magdaleno, Mu Li
Publikováno v:
Methods. 87:26-30
Exosomes are RNA and protein-containing nanovesicles secreted by all cell types and found in abundance in body fluids, including blood, urine and cerebrospinal fluid. These vesicles seem to be a perfect source of biomarkers, as their cargo largely re
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d7e5b7533e84e5028a6599d1f48d78b8
https://doi.org/10.1016/j.ymeth.2015.03.009
https://doi.org/10.1016/j.ymeth.2015.03.009
Autor:
Jan Hellemans, Hans Binder, Jean Thierry-Mieg, Joshua Xu, Djork-Arné Clevert, Peter Sykacek, Matthias Fischer, Youping Deng, Samir Lababidi, Ryan Peters, Hanlin Gao, Craig A. Praul, Meihua Gong, Jo Vandesompele, Haiqing Li, Wei Wang, Joaquín Dopazo, Shawn Levy, Yang Liao, John Zhang, Lee Thomas Szkotnicki, Paul Zumbo, Huixiao Hong, Weida Tong, Quan Zhen Li, E. Aubrey Thompson, Jennifer G. Catalano, Danielle Thierry-Mieg, Binsheng Gong, Wenwei Zhang, Wendell D. Jones, Min Jian, Dalila B. Megherbi, Lucille Rainbow, Robert Setterquist, Peng Li, Hong Fang, Javier Pérez-Florido, Xin Lu, Chen Zhao, Stephen J. Walker, Tao Qing, Marco Chierici, Yiming Zhou, Joseph Meehan, Christopher E. Mason, Eric D. Wieben, Mehdi Pirooznia, Liqing Wan, Bimeng Tu, Stan Letovsky, James C. Fuscoe, Sepp Hochreiter, Yoichi Gondo, Alicia Vela-Boza, Bridgett Green, Li Li, Zirui Dong, Weimin Cai, Geng Chen, Pedro Furió-Tarí, Andreas Scherer, Zhenqiang Su, Scott Schwartz, Charles Wang, Frank Staedtler, Jian Wang, Wenzhong Xiao, Yong Yang, Murray H. Brilliant, Wei Shi, Scott S. Auerbach, Matthew Tinning, Yongxiang Fang, Tingting Du, Meiwen Jia, Jiekun Xuan, Shiyong Li, Yan Li, Ying Yu, Adnan Derti, Ruchir R. Shah, Nadereh Jafari, Nancy Stralis-Pavese, Edward J. Oakeley, Jinhui Wang, Pierre R. Bushel, Jun Wang, Simon Lin, Joost H.M. van Delft, Francisco Javier López, Weigong Ge, Huan Gao, James C. Willey, Roger Perkins, Xin Xing Tan, Viswanath Devanarayan, Laure Sambourg, Zhiyu Peng, Po Yen Wu, Jianying Li, Philippe Rocca-Serra, Javier Santoyo-Lopez, Paweł P. Łabaj, David P. Kreil, Elia Stupka, John H. Phan, Heng Luo, Gary P. Schroth, Roderick V. Jensen, Thomas M. Blomquist, Russell D. Wolfinger, John F. Thompson, Wenqian Zhang, Nan Mei, Suzanne Kay, May D. Wang, Tzu Ming Chu, Jie Shen, Jiri Zavadil, Weihong Xu, Wenjun Bao, Akhilesh Pandey, Rong Chen, Leming Shi, Yutaka Suzuki, Todd M. Smith, Chao Guo, Zhuolin Gong, Feng Qian, Mario Fasold, Lei Guo, Ching-Wei Chang, Reagan Kelly, Ana Conesa, Yate Ching Yuan, Cesare Furlanello, Elisa Venturini, Zhan Ye, Yuanting Zheng, Jos C. S. Kleinjans, James Hadfield, Susanna-Assunta Sansone, Gordon K. Smyth, Li Wu Guo, Stan Gaj, Oliver Stegle, Yanyan Zhang, Tao Chen, Ye Yin, Anita Fernandez, Tieliu Shi, Charles D. Johnson, Baitang Ning, Fei Lu, Florian Caimet, Bing Mu, Jorge Gandara, Ke Zhang, Sheng Li, Xiwen Ma
Publikováno v:
Nature biotechnology
Nature Biotechnology, 32(9), 903-914. Nature Publishing Group
Nature Biotechnology, 32(9), 903-914. Nature Publishing Group
We present primary results from the Sequencing Quality Control (SEQC) project, coordinated by the US Food and Drug Administration. Examining Illumina HiSeq, Life Technologies SOLiD and Roche 454 platforms at multiple laboratory sites using reference
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f574fbd57cb9cc567146ad9815046e12
https://doi.org/10.1038/nbt.2957
https://doi.org/10.1038/nbt.2957
Autor:
Joel Brockman, Nadine Spielmann, David T.W. Wong, Robert Setterquist, Jian Gu, Diane Ilsley, Kristi Lea, Sheila J. Heater
Publikováno v:
Clinical Chemistry. 58:1314-1321
BACKGROUND Evaluation of the salivary transcriptome is an emerging diagnostic technology with discriminatory power for disease detection. This study explored massively parallel sequencing for providing nucleotide-level sequence information for each R
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::04b7535a973288928a4cb5dabbe3975e
https://doi.org/10.1373/clinchem.2011.176941
https://doi.org/10.1373/clinchem.2011.176941
Autor:
Natalia Novoradovskaya, Anne Bergstrom Lucas, Xu Guo, James C. Willey, Janet A. Warrington, Cecilie Boysen, P. Scott Pine, Michael A Wilson, Roderick V. Jensen, Paul K. Wolber, Yaron Turpaz, Richard Shippy, Jean Thierry-Mieg, Danielle Thierry-Mieg, Robert Setterquist, Yongming Andrew Sun, Leming Shi, Wendell D. Jones, Stephanie Fulmer-Smentek, Charles D. Johnson, Eugene Chudin, Adam Papallo, Shawn C. Baker, Damir Herman
Publikováno v:
Nature Biotechnology. 24:1123-1131
We have assessed the utility of RNA titration samples for evaluating microarray platform performance and the impact of different normalization methods on the results obtained. As part of the MicroArray Quality Control project, we investigated the per
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::52dc0f2a91dd0ec03ea184777914a507
https://doi.org/10.1038/nbt1241
https://doi.org/10.1038/nbt1241
Autor:
Alan Brunner, Glenda C. Delenstarr, Timothy K. McDaniel, Lisa J. Croner, Chunlin Xiao, Raymond R. Samaha, Wen Yang, Lei Guo, Stephen J. Walker, Terry Osborn, Federico Goodsaid, P. Scott Pine, J. Christopher Corton, Yuling Luo, Yaron Turpaz, Alexander Wong, Raj K. Puri, Jean Thierry-Mieg, Michael A Wilson, Anne Bergstrom Lucas, Heather Harbottle, Eli Hatchwell, Donna Brown, Jie Wu, Shawn Levy, Wendell D. Jones, Ola Myklebost, Craig A. Hauser, Vincent Bertholet, J. Eugene LeClerc, David J. Dix, Scott A. Jackson, Eugene Chudin, Beena Vallanat, Susan D. Hester, Mark Schena, Barry A. Rosenzweig, James J. Chen, Paul K. Wolber, Adam Papallo, Yongming Andrew Sun, Shawn C. Baker, Uwe Scherf, Zoltan Szallasi, William Slikker, Kenneth L. Philips, Xutao Deng, Lajos Pusztai, Sue Jane Wang, Janet Hager, Xu Guo, Tao Han, Charles Wang, Frank Staedtler, Hongmei Sun, Svetlana Shchegrova, Christopher Davies, Liang Zhang, James C. Willey, Yaping Zong, Kathleen Y. Lee, Paul K. Haje, James C. Fuscoe, Ying Liu, Natalia Novoradovskaya, Russell D. Wolfinger, Kathryn Gallagher, Roderick V. Jensen, Feng Qian, Wenjun Bao, Christophe Van, Bud Bromley, Janet A. Warrington, Leming Shi, Tucker A. Patterson, David Dorris, Huixiao Hong, Winston Patrick Kuo, Hongzu Ren, Xiaoxi Megan Cao, Cecilie Boysen, Michael S. Orr, Danielle Thierry-Mieg, Xiaohui Fan, Felix W. Frueh, Gary P. Schroth, Yonghong Wang, Chunmei Liu, Yunqing Ma, Shashi Amur, Lu Zhang, Michael Lombardi, Dave D. Smith, Tzu Ming Chu, Jun Xu, Charles D. Johnson, Baitang Ning, Timothy Davison, Botoul Maqsodi, Karol L. Thompson, Thomas A. Cebula, Richard Shippy, Edward K. Lobenhofer, Weida Tong, Quan Zhen Li, Catalin Barbacioru, Qian Xie, Aron Charles Eklund, Ernest S. Kawasaki, Patrick J. Collins, Zivana Tezak, Elizabeth Herness Peters, Francoise de Longueville, Stephanie Fulmer-Smentek, Hong Fang, Patrick Hurban, Scott R. Magnuson, Hanlee P. Ji, Roger Perkins, Mitch Rosen, Ron L. Peterson, Weigong Ge, Stephen C. Harris, Sheng Zhong, Charles R. Knight, Damir Herman, Zhenqiang Su, Roger D. Canales, Nan Mei, Jing Cheng, Irina Tikhonova, Gavin M. Fischer, Laura H. Reid, Robert Setterquist, Yvonne P. Dragan, Jing Han, John F. Corson
Publikováno v:
Nature Biotechnology. 24:1151-1161
Over the last decade, the introduction of microarray technology has had a profound impact on gene expression research. The publication of studies with dissimilar or altogether contradictory results, obtained using different microarray platforms to an
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4adf1138546582bb6865b8c5111ba4f9
https://doi.org/10.1038/nbt1239
https://doi.org/10.1038/nbt1239
Autor:
Joe Hackett, Kathleen F. Kerr, Garry Miyada, Leming Shi, Kathy Y Lee, Paul K. Wolber, Michael J. Fero, Timothy J Sendera, Walter H. Koch, Steven R. Bauer, Chitra Manohar, Rosalie K. Elespuru, James C. Fuscoe, Raymond R. Samaha, Richard P. Beyer, Michael A Wilson, Zora Modrusan, Patrick Gilles, Bud Bromley, Renata Zadro, Carole Foy, Laura H. Reid, Jesus Soriano, Robert Setterquist, Marc L. Salit, Federico Goodsaid, Elizabeth A. Wagar, Helen C. Causton, Shawn C. Baker, Z. Lewis Liu, Tamma Kaysser-Kranich, Richard Shippy, Richard D. Hockett, Chunmei Liu, Janet A. Warrington, David Gerhold, Helen Parkes, Gretchen L. Kiser, James D. Brenton, Ernest S. Kawasaki, Uwe Scherf, Pranvera Ikonomi, Frederike Wilmer, Xu Guo, Xiaolian Gao, Michael P Conley, Rafael A. Irizarry, Raj K. Puri, Anne Bergstrom Lucas, John Burrill, Thomas B. Ryder, Xiaoning Wu, Mickey Williams
Publikováno v:
Nature Methods. 2:731-734
Standard controls and best practice guidelines advance acceptance of data from research, preclinical and clinical laboratories by providing a means for evaluating data quality. The External RNA Controls Consortium (ERCC) is developing commonly agreed
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ddd904f40d6ffe928f575694a74c11ec
https://doi.org/10.1038/nmeth1005-731
https://doi.org/10.1038/nmeth1005-731
Autor:
Joshua Xu, Huixiao Hong, Wei Shi, Jian Wang, Christopher E. Mason, Yong Yang, Yang Liao, Joaquín Dopazo, Marc L. Salit, Javier Santoyo-Lopez, P. Scott Pine, Charles Wang, Hans Binder, Ying Yu, Nadereh Jafari, Leming Shi, Sarah A. Munro, Ana Conesa, Zhan Ye, Gordon K. Smyth, Mario Fasold, Djork-Arné Clevert, Simon Lin, Robert Setterquist, Sepp Hochreiter, Joseph Meehan, Nancy Stralis-Pavese, David P. Kreil, Zhenqiang Su, Sheng Li, Paweł P. Łabaj, Steven P. Lund, Weida Tong
Publikováno v:
Nature Communications
r-CIPF. Repositorio Institucional Producción Científica del Centro de Investigación Principe Felipe (CIPF)
instname
r-CIPF: Repositorio Institucional Producción Científica del Centro de Investigación Principe Felipe (CIPF)
Centro de Investigación Principe Felipe (CIPF)
r-CIPF. Repositorio Institucional Producción Científica del Centro de Investigación Principe Felipe (CIPF)
instname
r-CIPF: Repositorio Institucional Producción Científica del Centro de Investigación Principe Felipe (CIPF)
Centro de Investigación Principe Felipe (CIPF)
There is a critical need for standard approaches to assess, report, and compare the technical performance of genome-scale differential gene expression experiments. We assess technical performance with a proposed "standard" dashboard of metrics derive
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::54624d64ae791ae97fd1b0e5c2fe6f11
Autor:
Robert Setterquist, Jian Gu, Emily Zeringer, Susan Magdaleno, Mu Li, Alexander V. Vlassov, Kristi Lea, Jeoffrey Schageman, Tim Barta
Publikováno v:
BioMed Research International
BioMed Research International, Vol 2013 (2013)
BioMed Research International, Vol 2013 (2013)
Exosomes are small (30–150 nm) vesicles containing unique RNA and protein cargo, secreted by all cell types in culture. They are also found in abundance in body fluids including blood, saliva, and urine. At the moment, the mechanism of exosome form
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f37603ef4653f4d733fe6528d237e2e8
http://europepmc.org/articles/PMC3800616
http://europepmc.org/articles/PMC3800616
Autor:
Brian P. O'Connor, Jose R. Rodriguez-Santana, Andrew H. Liu, Christopher R. Gignoux, Joshua Galanter, Celeste Eng, Esteban G. Burchard, Lindsey A. Roth, Robert Setterquist, Sharon M. Lutz, Sean Jacobson, Tasha E. Fingerlin, Alex Poole, Cydney Urbanek, Rajesh Kumar, Jeoffrey Schageman, Max A. Seibold
Publikováno v:
The Journal of allergy and clinical immunology, vol 133, iss 3
Background Bronchial airway expression profiling has identified inflammatory subphenotypes of asthma, but the invasiveness of this technique has limited its application to childhood asthma. Objectives We sought to determine whether the nasal transcri
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bf3e318b49235ec91dfddea08999a08d
https://pubmed.ncbi.nlm.nih.gov/24495433
https://pubmed.ncbi.nlm.nih.gov/24495433
Publikováno v:
Biochimica et biophysica acta. 1820(7)
Cells continuously secrete a large number of microvesicles, macromolecular complexes, and small molecules into the extracellular space. Of the secreted microvesicles, the nanoparticles called exosomes are currently undergoing intense scrutiny. These
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::190223c00c6da8029f27df4aa3a9b750
https://pubmed.ncbi.nlm.nih.gov/22503788
https://pubmed.ncbi.nlm.nih.gov/22503788