Zobrazeno 1 - 10
of 261
pro vyhledávání: '"Robert Riley"'
Autor:
Carlos Lax, Stephen J. Mondo, Macario Osorio-Concepción, Anna Muszewska, María Corrochano-Luque, Gabriel Gutiérrez, Robert Riley, Anna Lipzen, Jie Guo, Hope Hundley, Mojgan Amirebrahimi, Vivian Ng, Damaris Lorenzo-Gutiérrez, Ulrike Binder, Junhuan Yang, Yuanda Song, David Cánovas, Eusebio Navarro, Michael Freitag, Toni Gabaldón, Igor V. Grigoriev, Luis M. Corrochano, Francisco E. Nicolás, Victoriano Garre
Publikováno v:
Nature Communications, Vol 15, Iss 1, Pp 1-21 (2024)
Abstract DNA N6-adenine methylation (6mA) has recently gained importance as an epigenetic modification in eukaryotes. Its function in lineages with high levels, such as early-diverging fungi (EDF), is of particular interest. Here, we investigated the
Externí odkaz:
https://doaj.org/article/5354efd64f494f7582161cf6fc97112e
Autor:
Jeffrey J. Czajka, Yichao Han, Joonhoon Kim, Stephen J. Mondo, Beth A. Hofstad, AnaLaura Robles, Sajeet Haridas, Robert Riley, Kurt LaButti, Jasmyn Pangilinan, William Andreopoulos, Anna Lipzen, Juying Yan, Mei Wang, Vivian Ng, Igor V. Grigoriev, Joseph W. Spatafora, Jon K. Magnuson, Scott E. Baker, Kyle R. Pomraning
Publikováno v:
Frontiers in Bioengineering and Biotechnology, Vol 12 (2024)
The Lipomyces clade contains oleaginous yeast species with advantageous metabolic features for biochemical and biofuel production. Limited knowledge about the metabolic networks of the species and limited tools for genetic engineering have led to a r
Externí odkaz:
https://doaj.org/article/e4235ff99f1948b58b602ca0631e234b
Autor:
Reid Longley, Aaron Robinson, Julian A. Liber, Abigail E. Bryson, Demosthenes P. Morales, Kurt LaButti, Robert Riley, Stephen J. Mondo, Alan Kuo, Yuko Yoshinaga, Chris Daum, Kerrie Barry, Igor V. Grigoriev, Alessandro Desirò, Patrick S. G. Chain, Gregory Bonito
Publikováno v:
Communications Biology, Vol 6, Iss 1, Pp 1-13 (2023)
Abstract Diverse members of early-diverging Mucoromycota, including mycorrhizal taxa and soil-associated Mortierellaceae, are known to harbor Mollicutes-related endobacteria (MRE). It has been hypothesized that MRE were acquired by a common ancestor
Externí odkaz:
https://doaj.org/article/26b03e3f6152426da85258781f32a199
Autor:
Sebastian Theobald, Tammi C. Vesth, Elena Geib, Jane L. Nybo, Jens C. Frisvad, Thomas O. Larsen, Alan Kuo, Kurt LaButti, Ellen K. Lyhne, Inge Kjærbølling, Line Ledsgaard, Kerrie Barry, Alicia Clum, Cindy Chen, Matt Nolan, Laura Sandor, Anna Lipzen, Stephen Mondo, Jasmyn Pangilinan, Asaf Salamov, Robert Riley, Ad Wiebenga, Astrid Müller, Roland S. Kun, Ana Carolina dos Santos Gomes, Bernard Henrissat, Jon K. Magnuson, Blake A. Simmons, Miia R. Mäkelä, Uffe H. Mortensen, Igor V. Grigoriev, Matthias Brock, Scott E. Baker, Ronald P. de Vries, Mikael R. Andersen
Publikováno v:
Journal of Fungi, Vol 10, Iss 7, p 507 (2024)
Aspergillus terreus has attracted interest due to its application in industrial biotechnology, particularly for the production of itaconic acid and bioactive secondary metabolites. As related species also seem to possess a prosperous secondary metabo
Externí odkaz:
https://doaj.org/article/965e40567a17419182833c65476fe7d3
Publikováno v:
US Cardiology Review, Vol 18, Iss , Pp - (2024)
With an aging population, coronary calcification is increasingly encountered in modern day interventional practice. Unfortunately, it is associated with lower procedural success and higher rates of periprocedural complications, such as failure to del
Externí odkaz:
https://doaj.org/article/49fda599f8f8410089502adeb584ae9a
Autor:
Dariia Vyshenska, Pranav Sampara, Kanwar Singh, Andy Tomatsu, W. Berkeley Kauffman, Erin E. Nuccio, Steven J. Blazewicz, Jennifer Pett-Ridge, Katherine B. Louie, Neha Varghese, Matthew Kellom, Alicia Clum, Robert Riley, Simon Roux, Emiley A. Eloe-Fadrosh, Ryan M. Ziels, Rex R. Malmstrom
Publikováno v:
mSystems, Vol 8, Iss 4 (2023)
ABSTRACT Stable isotope probing (SIP) facilitates culture-independent identification of active microbial populations within complex ecosystems through isotopic enrichment of nucleic acids. Many DNA-SIP studies rely on 16S rRNA gene sequences to ident
Externí odkaz:
https://doaj.org/article/89714e1557644055a52c06f7ca084abc
Autor:
Robert Riley, Robert M. Bowers, Antonio Pedro Camargo, Ashley Campbell, Rob Egan, Emiley A. Eloe-Fadrosh, Brian Foster, Steven Hofmeyr, Marcel Huntemann, Matthew Kellom, Jeffrey A. Kimbrel, Leonid Oliker, Katherine Yelick, Jennifer Pett-Ridge, Asaf Salamov, Neha J. Varghese, Alicia Clum
Publikováno v:
Microbiology Spectrum, Vol 11, Iss 4 (2023)
ABSTRACT Petabases of environmental metagenomic data are publicly available, presenting an opportunity to characterize complex environments and discover novel lineages of life. Metagenome coassembly, in which many metagenomic samples from an environm
Externí odkaz:
https://doaj.org/article/088811fc0e4a493e9fac4e98c3ef0738
Autor:
Erin E. Nuccio, Steven J. Blazewicz, Marissa Lafler, Ashley N. Campbell, Anne Kakouridis, Jeffrey A. Kimbrel, Jessica Wollard, Dariia Vyshenska, Robert Riley, Andy Tomatsu, Rachel Hestrin, Rex R. Malmstrom, Mary Firestone, Jennifer Pett-Ridge
Publikováno v:
Microbiome, Vol 10, Iss 1, Pp 1-20 (2022)
Abstract Background Linking the identity of wild microbes with their ecophysiological traits and environmental functions is a key ambition for microbial ecologists. Of many techniques that strive for this goal, Stable-isotope probing—SIP—remains
Externí odkaz:
https://doaj.org/article/aaedad4abe404cb49b94c8c41011730f
Autor:
Sajeet Haridas, Jennifer B. González, Robert Riley, Maxim Koriabine, Mi Yan, Vivian Ng, Adriana Rightmyer, Igor V. Grigoriev, Scott E. Baker, B. Gillian Turgeon
Publikováno v:
mBio, Vol 14, Iss 2 (2023)
ABSTRACT In 1970, the Southern Corn Leaf Blight epidemic ravaged U.S. fields to great economic loss. The outbreak was caused by never-before-seen, supervirulent, Race T of the fungus Cochliobolus heterostrophus. The functional difference between Race
Externí odkaz:
https://doaj.org/article/5c078178b078455e8a8230d1107a7a98
Autor:
Jingcheng Zhang, Nan Shen, Chuang Li, Xingjie Xiang, Gaolei Liu, Ying Gui, Sean Patev, David S. Hibbett, Kerrie Barry, William Andreopoulos, Anna Lipzen, Robert Riley, Guifen He, Mi Yan, Igor V. Grigoriev, Hoi Shan Kwan, Man Kit Cheung, Yinbing Bian, Yang Xiao
Publikováno v:
Journal of Advanced Research, Vol 38, Iss , Pp 91-106 (2022)
Introduction: Mushroom-forming fungi comprise diverse species that develop complex multicellular structures. In cultivated species, both ecological adaptation and artificial selection have driven genome evolution. However, little is known about the c
Externí odkaz:
https://doaj.org/article/f5b4a974288c40aeaa10d3f25646c23e