Zobrazeno 1 - 5
of 5
pro vyhledávání: '"Robert J.M. Eveleigh"'
Autor:
Xi Zhang, Yining Hu, Laura Eme, Shinichiro Maruyama, Robert J.M. Eveleigh, Bruce A. Curtis, Shannon J. Sibbald, Julia F. Hopkins, Gina V. Filloramo, Klaas J. van Wijk, John M. Archibald
Publikováno v:
STAR Protocols, Vol 3, Iss 1, Pp 101175- (2022)
Summary: Various bioinformatics protocols have been developed for trimming the number of operational taxonomic units (OTUs) in phylogenetic datasets, but they typically require significant manual intervention. Here we present TreeTuner, a semiautomat
Externí odkaz:
https://doaj.org/article/c1245289dfb04b829337ef7af067e2ff
Autor:
Robert J.M. Eveleigh, Michael W. Gray, John M. Archibald, Julia F. Hopkins, Jonathan A. D. Neilson, Dion G. Durnford, Sylvie Laboissiere, David F. Spencer
Publikováno v:
Genome Biology and Evolution
Chlorarachniophytes are unicellular marine algae with plastids (chloroplasts) of secondary endosymbiotic origin. Chlorarachniophyte cells retain the remnant nucleus (nucleomorph) and cytoplasm (periplastidial compartment, PPC) of the green algal endo
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::524e3693632565498eac58e3a62a12cd
https://doi.org/10.1093/gbe/evs115
https://doi.org/10.1093/gbe/evs115
Publikováno v:
Genome Biology and Evolution
Lateral gene transfer (LGT) is an important factor contributing to the evolution of prokaryotic genomes. The Aquificae are a hyperthermophilic bacterial group whose genes show affiliations to many other lineages, including the hyperthermophilic Therm
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::87c23d1f1ca1781beef0da753cdf1756
https://pubmed.ncbi.nlm.nih.gov/24281050
https://pubmed.ncbi.nlm.nih.gov/24281050
Autor:
Naomi M. Fast, Robert G. Beiko, Chihiro Sarai, Thomas Mock, John M. Archibald, Stephen J. Aves, Michael W. Gray, Cameron J. Grisdale, Mary J. Klute, Goro Tanifuji, Joel B. Dacks, Dion G. Durnford, Claudio H. Slamovits, Jeremy Schmutz, Beverley R. Green, Jonathan A. D. Neilson, E. Virginia Armbrust, Takuro Nakayama, Julia F. Hopkins, Eunsoo Kim, David F. Spencer, Steven G. Ball, Peter G. Kroth, Ellen J. Pritham, Thomas A. Richards, Jane Grimwood, Pedro M. Coutinho, Erika Lindquist, Marc P. Höppner, Callum J. Bell, Shu Shirato, Scott William Roy, Ansgar Gruber, Miroslav Oborník, Asaf Salamov, Gillian H. Gile, Robert J.M. Eveleigh, Manuel Irimia, Shigekatsu Suzuki, Geoffrey I. McFadden, Shinichiro Maruyama, Emily K. Herman, Stefan Zauner, Bernard Henrissat, Franziska Hempel, Kerrie Barry, Aikaterini Symeonidi, Sarah Schaack, Arvind K. Bharti, Yuan Liu, Ken-ichiro Ishida, Naoko T. Onodera, Anthony M. Poole, Fabien Burki, Susan Lucas, Patrick J. Keeling, Christopher E. Lane, Shehre-Banoo Malik, Uwe G. Maier, Darcy L. McRose, Igor V. Grigoriev, Maria Cecilia Arias, Adrian Reyes-Prieto, Yoshihisa Hirakawa, John A. Crow, Stefan A. Rensing, Luděk Kořený, Gabrielle Rocap, Bruce A. Curtis, Marek Eliáš, Alan Kuo, Robin Kramer, Alexandra Z. Worden
Publikováno v:
Nature, 492 (7427). pp. 59-65.
Curtis, Bruce A.; Tanifuji, Goro; Burki, Fabien; Gruber, Ansgar; Irimia, Manuuel; Maruyama, Shinichiro; et al.(2012). Algal genomes reveal evolutionary mosaicism and the fate of nucleomorphs. Nature. Lawrence Berkeley National Laboratory: Lawrence Berkeley National Laboratory. Retrieved from: http://www.escholarship.org/uc/item/0172q4v5
Curtis, Bruce A.; Tanifuji, Goro; Burki, Fabien; Gruber, Ansgar; Irimia, Manuuel; Maruyama, Shinichiro; et al.(2012). Algal genomes reveal evolutionary mosaicism and the fate of nucleomorphs. Nature. Lawrence Berkeley National Laboratory: Lawrence Berkeley National Laboratory. Retrieved from: http://www.escholarship.org/uc/item/0172q4v5
Cryptophyte and chlorarachniophyte algae are transitional forms in the widespread secondary endosymbiotic acquisition of photosynthesis by engulfment of eukaryotic algae. Unlike most secondary plastid-bearing algae, miniaturized versions of the endos
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4721502d6dd23690d5d469e36e3aad79
https://pubmed.ncbi.nlm.nih.gov/23201689
https://pubmed.ncbi.nlm.nih.gov/23201689
Publikováno v:
BMC Research Notes
Background With rapid advances in genome sequencing and bioinformatics, it is now possible to generate phylogenetic trees containing thousands of operational taxonomic units (OTUs) from a wide range of organisms. However, use of rigorous tree-buildin
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::51b314d31e14db7d05ee81b69ce4a3ba