Zobrazeno 1 - 10
of 63
pro vyhledávání: '"Residue contact prediction"'
Publikováno v:
Frontiers in Bioinformatics, Vol 2 (2022)
Computational function prediction is one of the most important problems in bioinformatics as elucidating the function of genes is a central task in molecular biology and genomics. Most of the existing function prediction methods use protein sequences
Externí odkaz:
https://doaj.org/article/779020ddf28649999abb7f25906cf257
Publikováno v:
BMC Bioinformatics, Vol 22, Iss 1, Pp 1-9 (2021)
Abstract Background Protein inter-residue contact and distance prediction are two key intermediate steps essential to accurate protein structure prediction. Distance prediction comes in two forms: real-valued distances and ‘binned’ distograms, wh
Externí odkaz:
https://doaj.org/article/93795621234d4cc69e899420b5353d4b
Publikováno v:
BMC Bioinformatics, Vol 20, Iss S2, Pp 115-127 (2019)
Abstract Background The ability to predict which pairs of amino acid residues in a protein are in contact with each other offers many advantages for various areas of research that focus on proteins. For example, contact prediction can be used to redu
Externí odkaz:
https://doaj.org/article/8502c0180ade446fa4399abe6ca4b2a3
Publikováno v:
BMC Bioinformatics, Vol 19, Iss 1, Pp 1-19 (2018)
Abstract Background Despite the rapid progress of protein residue contact prediction, predicted residue contact maps frequently contain many errors. However, information of residue pairing in β strands could be extracted from a noisy contact map, du
Externí odkaz:
https://doaj.org/article/4f37c0f169204a44a6c2bb3773f0f71b
Publikováno v:
BMC Bioinformatics, Vol 18, Iss 1, Pp 1-12 (2017)
Abstract Background In structural biology area, protein residue-residue contacts play a crucial role in protein structure prediction. Some researchers have found that the predicted residue-residue contacts could effectively constrain the conformation
Externí odkaz:
https://doaj.org/article/7965c352ccef4db9ad5f707b91ad3881
Akademický článek
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Akademický článek
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Publikováno v:
BMC Bioinformatics, Vol 20, Iss S2, Pp 115-127 (2019)
BMC Bioinformatics
BMC Bioinformatics
Background The ability to predict which pairs of amino acid residues in a protein are in contact with each other offers many advantages for various areas of research that focus on proteins. For example, contact prediction can be used to reduce the co
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9024327fca1fd9f1483675c4b9d7967e
http://link.springer.com/article/10.1186/s12859-019-2627-6
http://link.springer.com/article/10.1186/s12859-019-2627-6
Publikováno v:
BMC Bioinformatics
BMC Bioinformatics, Vol 22, Iss 1, Pp 1-9 (2021)
BMC Bioinformatics, Vol 22, Iss 1, Pp 1-9 (2021)
BackgroundProtein inter-residue contact and distance prediction are two key intermediate steps essential to accurate protein structure prediction. Distance prediction comes in two forms: real-valued distances and ‘binned’ distograms, which are a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::627cf2a19537ec9171fa1badb7b9bee4
https://doi.org/10.1186/s12859-020-03938-z
https://doi.org/10.1186/s12859-020-03938-z
Publikováno v:
Computational and Structural Biotechnology Journal
Computational and Structural Biotechnology Journal, Vol 16, Iss, Pp 503-510 (2018)
Computational and Structural Biotechnology Journal, Vol 16, Iss, Pp 503-510 (2018)
Information of residue-residue contacts is essential for understanding the mechanism of protein folding, and has been successfully applied as special topological restraints to simplify the conformational sampling in de novo protein structure predicti
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a362685d1d710bdfbc512008dc0b2fdb
http://europepmc.org/articles/PMC6247404
http://europepmc.org/articles/PMC6247404