Zobrazeno 1 - 10
of 13
pro vyhledávání: '"Rena Mizutani"'
Autor:
Daisuke Kami, Tomoya Kitani, Akihiro Nakamura, Naoki Wakui, Rena Mizutani, Masahito Ohue, Fuyuki Kametani, Nobuyoshi Akimitsu, Satoshi Gojo
Publikováno v:
PLoS ONE, Vol 13, Iss 10, p e0203708 (2018)
Cellular transitions and differentiation processes require mRNAs supporting the new phenotype but also the clearance of existing mRNAs for the parental phenotype. Cellular reprogramming from fibroblasts to induced pluripotent stem cells (iPSCs) occur
Externí odkaz:
https://doaj.org/article/38fbf5661b334aa2a3a5bb19c0cb11af
Autor:
Rena Mizutani, Ai Wakamatsu, Noriyuki Tanaka, Hiroshi Yoshida, Naobumi Tochigi, Yoshio Suzuki, Tadahiro Oonishi, Hidenori Tani, Keiko Tano, Kenichi Ijiri, Takao Isogai, Nobuyoshi Akimitsu
Publikováno v:
PLoS ONE, Vol 7, Iss 4, p e34949 (2012)
Whole transcriptome analyses have revealed a large number of novel transcripts including long and short noncoding RNAs (ncRNAs). Currently, there is great interest in characterizing the functions of the different classes of ncRNAs and their relevance
Externí odkaz:
https://doaj.org/article/3d5ec45b53c24dba8b36a374580678af
Genome-wide expression analysis of RNAs was revolutionized by the development of RNA sequencing (RNA-seq). RNA-seq revealed that most genomic regions are transcribed pervasively, resulting in the production of a large number of noncoding RNAs (ncRNA)
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::e47714a8a8fd706e5e115e5b0efc98b8
https://doi.org/10.1016/b978-0-12-805388-1.00011-0
https://doi.org/10.1016/b978-0-12-805388-1.00011-0
Autor:
Nobuyoshi Akimitsu, Juliana Almeida, Anthony Au, Vasudevan Ayyappan, J. Armando Casas-Mollano, Frances A. Champagne, Taiping Chen, Ravindresh Chhabra, Tian Chi, James P. Curley, Gary L. Dunbar, Mollee C. Dworkin, Thomas Eggermann, Felice Elefant, Hodaka Fujii, Toshitsugu Fujita, Krutika S. Gaonkar, Steffen Gay, Linn Gillberg, Naoko Hattori, Kimberly E. Hawkins, Rita K. Hayford, Zdenko Herceg, Line Hjort, Xiaotong Hu, Eveline M. Ibeagha-Awemu, Ali Jawaid, Astrid Jüngel, Venu (Kal) Kalavacharla, Ashley M. Karnay, Loo Keat Wei, Hasan Khatib, Kerstin Klein, Eloïse A. Kremer, Ilkka Kronholm, Hervé Lalucque, Ho-Sun Lee, Yongqin Li, Bo Liu, Shuiping Liu, Chiao-Ling Lo, Hanna Maciejewska-Rodrigues, Frédérique Magdinier, Panchanan Maiti, Fabienne Malagnac, Isabelle M. Mansuy, Shaoshuai Mao, J. Alfredo Martinez, Rahia Mashoodh, Fermin I. Milagro, Rena Mizutani, Shiraz Mujtaba, Pamela N. Munster, Rabih Murr, Rūta Navakauskienė, Tinh-Suong Nguyen, Chris O’Neill, Ifeanyi Okpala, Martin-Joseph Okpala, Zimuzoh Orakwue, Jeenah Park, Jacob Peedicayil, Gerd P. Pfeifer, Vincenzo Pirrotta, Tibor A. Rauch, Marisol Resendiz, Jérôme D. Robin, Julien Rossignol, Richard Saffery, Axel Schumacher, Michael I. Shifman, Philippe Silar, Athena Sklias, Susan L. Slager, Kjetil Søreide, Bhairavi Srinageshwar, Mayavan Subramani, J. David Sweatt, Moshe Szyf, Manuela Terranova-Barberio, Scott Thomas, Shulan Tian, Trygve O. Tollefsbol, Toshikazu Ushijima, Ludovica Vanzan, Nicolas Veland, Günter Vogt, Regan Vryer, Martin M. Watson, Toshimichi Yamada, Huihuang Yan, Ericka Zacarias, Allison Y. Zhong, Feng C. Zhou
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::1d68cbd66c6b3838223b3cbb7f738e72
https://doi.org/10.1016/b978-0-12-805388-1.00046-8
https://doi.org/10.1016/b978-0-12-805388-1.00046-8
Autor:
Yutaka Suzuki, Katsutoshi Imamura, Naoto Imamachi, Nobuyoshi Akimitsu, Rena Mizutani, Takuma Irie, Hidenori Tani
Publikováno v:
Methods. 67:55-63
We recently developed a novel transcriptome analysis method, termed 5'-bromo-uridine (BrU) immunoprecipitation chase-deep sequencing analysis (BRIC-seq). BRIC-seq enables the determination of genome-wide RNA stability by chasing chronological decreas
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::da681835f31f06ce3ecabb2c1292b368
https://doi.org/10.1016/j.ymeth.2013.07.014
https://doi.org/10.1016/j.ymeth.2013.07.014
Autor:
Kazi Abdus Salam, Yutaka Suzuki, Rena Mizutani, Takuma Irie, Nobuyoshi Akimitsu, Naoto Imamachi, Hidenori Tani, Kenichi Ijiri, Tetsushi Yada
Publikováno v:
RNA Biology. 9:1370-1379
UPF1 eliminates aberrant mRNAs harboring premature termination codons, and regulates the steady-state levels of normal physiological mRNAs. Although genome-wide studies of UPF1 targets performed, previous studies did not distinguish indirect UPF1 tar
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::806a767d59c303b0a9d05efdcec9b09f
https://doi.org/10.4161/rna.22360
https://doi.org/10.4161/rna.22360
Autor:
Nobuyoshi Akimitsu, Rena Mizutani, Kazi Abdus Salam, Hidenori Tani, Ai Wakamatsu, Takao Isogai, Yutaka Suzuki, Kenichi Ijiri, Keiko Tano
Publikováno v:
Genome Research. 22:947-956
Whole transcriptome analyses using tiling microarrays (Bertone et al. 2004) and deep sequencing (Nagalakshmi et al. 2008) have revealed huge numbers of novel transcripts, including long and short noncoding RNAs (ncRNAs). The ratio of noncoding to pro
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e3fa7454818df33f8aa679666f7a548d
https://doi.org/10.1101/gr.130559.111
https://doi.org/10.1101/gr.130559.111
Autor:
Rena Mizutani, Kyoko Matsumoto, Sho Maekawa, Miho Kakeda, Sumio Sugano, Takuma Irie, Nobuyoshi Akimitsu, Tetsushi Yada, Yutaka Suzuki, Katsutoshi Imamura, Naoto Imamachi, Hidenori Tani
Publikováno v:
BMC Genomics
Background Histone epigenome data determined by chromatin immunoprecipitation sequencing (ChIP-seq) is used in identifying transcript regions and estimating expression levels. However, this estimation does not always correlate with eventual RNA expre
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d4472f808e61d71de6872beb10be34ff
http://europepmc.org/articles/PMC4359779
http://europepmc.org/articles/PMC4359779
Autor:
Hidenori, Tani, Naoto, Imamachi, Rena, Mizutani, Katsutoshi, Imamura, Yeondae, Kwon, Satoru, Miyazaki, Sho, Maekawa, Yutaka, Suzuki, Nobuyoshi, Akimitsu
Publikováno v:
Methods in molecular biology (Clifton, N.J.). 1262
Genome-wide analysis for determining RNA turnover is an advanced method in RNA biology that examines the specific half-life of nuclear noncoding RNA (ncRNA). In particular, a pulse-labeling method using uridine analogs enables the determination of RN
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::8d71ada1b3104490032ee784dcb70274
https://pubmed.ncbi.nlm.nih.gov/25555590
https://pubmed.ncbi.nlm.nih.gov/25555590
Autor:
Rena Mizutani, Katsutoshi Imamura, Nobuyoshi Akimitsu, Satoru Miyazaki, Yutaka Suzuki, Sho Maekawa, Naoto Imamachi, Hidenori Tani, Yeondae Kwon
Publikováno v:
Methods in Molecular Biology ISBN: 9781493922529
Genome-wide analysis for determining RNA turnover is an advanced method in RNA biology that examines the specific half-life of nuclear noncoding RNA (ncRNA). In particular, a pulse-labeling method using uridine analogs enables the determination of RN
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::fe5964370be5efbceeba5ef55a025216
https://doi.org/10.1007/978-1-4939-2253-6_19
https://doi.org/10.1007/978-1-4939-2253-6_19