Zobrazeno 1 - 10
of 215
pro vyhledávání: '"Relative synonymous codon usage"'
Publikováno v:
Polish Journal of Microbiology, Vol 73, Iss 4, Pp 455-465 (2024)
Human papillomavirus type 51 (HPV-51) is associated with various cancers, including cervical cancer. Examining the codon usage bias of the organism can offer valuable insights into its evolutionary patterns and its relationship with the host. This st
Externí odkaz:
https://doaj.org/article/7315ccf4ad724100a89dca14558690ce
Publikováno v:
Frontiers in Microbiology, Vol 15 (2024)
Codon usage bias (CUB) has been described in viruses, prokaryotes, and eukaryotes and has been linked to several cellular and environmental factors, such as the organism's growth temperature, gene expression levels, and regulation of protein synthesi
Externí odkaz:
https://doaj.org/article/87f83e135a904bb692172e74d30aa9d6
Autor:
Dawei Wang, Baoling Yang
Publikováno v:
Parasites & Vectors, Vol 16, Iss 1, Pp 1-14 (2023)
Abstract Background Apicomplexan protozoa are a diverse group of obligate intracellular parasites causing many diseases that affect humans and animals, such as malaria, toxoplasmosis, and cryptosporidiosis. Apicomplexan protozoa possess unique thiore
Externí odkaz:
https://doaj.org/article/9e990f9aeba64b3e882bdd4f3018926c
Publikováno v:
Frontiers in Microbiology, Vol 14 (2023)
BackgroundPlasmodium falciparum is a protozoan parasite that causes the most severe form of malaria in humans worldwide, which is predominantly found in sub-Saharan Africa, where it is responsible for the majority of malaria-related deaths. Plasmodiu
Externí odkaz:
https://doaj.org/article/67d9cd096f6b41d4a1a2ad1e9d83e5d7
Autor:
Sarah E. Fumagalli, Nigam H. Padhiar, Douglas Meyer, Upendra Katneni, Haim Bar, Michael DiCuccio, Anton A. Komar, Chava Kimchi-Sarfaty
Publikováno v:
Virology Journal, Vol 20, Iss 1, Pp 1-22 (2023)
Abstract Background Since the onset of the SARS-CoV-2 pandemic, bioinformatic analyses have been performed to understand the nucleotide and synonymous codon usage features and mutational patterns of the virus. However, comparatively few have attempte
Externí odkaz:
https://doaj.org/article/3ad6147fc4414bfb99dc92dfecc690e9
Publikováno v:
Shipin gongye ke-ji, Vol 43, Iss 6, Pp 141-149 (2022)
Codon usage bias is quite different among different organisms. To elucidate the genetic codon preference in the most commonly used industrial strain Trichoderma reesei, codon usage analysis was performed with the opening reading frames of 9352 genes
Externí odkaz:
https://doaj.org/article/275da64947f54a33b05f0e0fb559822a
Akademický článek
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Autor:
Douglas Meyer, Jacob Kames, Haim Bar, Anton A. Komar, Aikaterini Alexaki, Juan Ibla, Ryan C. Hunt, Luis V. Santana-Quintero, Anton Golikov, Michael DiCuccio, Chava Kimchi-Sarfaty
Publikováno v:
Genome Medicine, Vol 13, Iss 1, Pp 1-18 (2021)
Abstract Background Gene expression is highly variable across tissues of multi-cellular organisms, influencing the codon usage of the tissue-specific transcriptome. Cancer disrupts the gene expression pattern of healthy tissue resulting in altered co
Externí odkaz:
https://doaj.org/article/c7ca96719b204fc496ee0de68b57825b
Publikováno v:
Frontiers in Cellular and Infection Microbiology, Vol 12 (2022)
Human polyomaviruses (HPyVs) can cause serious and deleterious infections in human. Yet, the molecular mechanism underlying these infections, particularly in polyomavirus nephropathy (PVAN), is not well-defined. In the present study, we aimed to iden
Externí odkaz:
https://doaj.org/article/6d9b95f266c24b159eaa105add8d70f6
Publikováno v:
Fishes, Vol 8, Iss 5, p 238 (2023)
Complete mitochondrial genome (mitogenome) sequences can provide useful and varied information for evolutionary and phylogenetic studies. We report the first complete mitogenome sequence of the bumblebee shrimp (Gnathophyllum americanum). The mitogen
Externí odkaz:
https://doaj.org/article/d82b8ccaddff4d52a1d0f9e16e01492a