Harmonizing lipidomics: NIST interlaboratory comparison exercise for lipidomics using SRM 1950–Metabolites in Frozen Human Plasma[S]

Autor: John A. Bowden, Alan Heckert, Candice Z. Ulmer, Christina M. Jones, Jeremy P. Koelmel, Laila Abdullah, Linda Ahonen, Yazen Alnouti, Aaron M. Armando, John M. Asara, Takeshi Bamba, John R. Barr, Jonas Bergquist, Christoph H. Borchers, Joost Brandsma, Susanne B. Breitkopf, Tomas Cajka, Amaury Cazenave-Gassiot, Antonio Checa, Michelle A. Cinel, Romain A. Colas, Serge Cremers, Edward A. Dennis, James E. Evans, Alexander Fauland, Oliver Fiehn, Michael S. Gardner, Timothy J. Garrett, Katherine H. Gotlinger, Jun Han, Yingying Huang, Aveline Huipeng Neo, Tuulia Hyötyläinen, Yoshihiro Izumi, Hongfeng Jiang, Houli Jiang, Jiang Jiang, Maureen Kachman, Reiko Kiyonami, Kristaps Klavins, Christian Klose, Harald C. Köfeler, Johan Kolmert, Therese Koal, Grielof Koster, Zsuzsanna Kuklenyik, Irwin J. Kurland, Michael Leadley, Karen Lin, Krishna Rao Maddipati, Danielle McDougall, Peter J. Meikle, Natalie A. Mellett, Cian Monnin, M. Arthur Moseley, Renu Nandakumar, Matej Oresic, Rainey Patterson, David Peake, Jason S. Pierce, Martin Post, Anthony D. Postle, Rebecca Pugh, Yunping Qiu, Oswald Quehenberger, Parsram Ramrup, Jon Rees, Barbara Rembiesa, Denis Reynaud, Mary R. Roth, Susanne Sales, Kai Schuhmann, Michal Laniado Schwartzman, Charles N. Serhan, Andrej Shevchenko, Stephen E. Somerville, Lisa St. John-Williams, Michal A. Surma, Hiroaki Takeda, Rhishikesh Thakare, J. Will Thompson, Federico Torta, Alexander Triebl, Martin Trötzmüller, S. J. Kumari Ubhayasekera, Dajana Vuckovic, Jacquelyn M. Weir, Ruth Welti, Markus R. Wenk, Craig E. Wheelock, Libin Yao, Min Yuan, Xueqing Heather Zhao, Senlin Zhou

Publikováno v: Journal of Lipid Research, Vol 58, Iss 12, Pp 2275-2288 (2017)

As the lipidomics field continues to advance, self-evaluation within the community is critical. Here, we performed an interlaboratory comparison exercise for lipidomics using Standard Reference Material (SRM) 1950–Metabolites in Frozen Human Plasma

Externí odkaz: https://doaj.org/article/e757670a32e84af9bc9bad52c975b5dc

The Genome of the Charophyte Alga Penium margaritaceum Bears Footprints of the Evolutionary Origins of Land Plants

Autor: Jocelyn K. C. Rose, Glenn Philippe, Xuepeng Sun, Li Sun, Saleh Alseekh, Chen Jiao, Sheng Zhang, Reiko Kiyonami, Alisdair R. Fernie, Kattia Palacio Lopez, Susan Jeon, Iben Sørensen, Zhangjun Fei, Honghe Sun, Reagan Reed, David S. Domozych, Hila Behar, Harry Brumer

The colonization of land by plants was a pivotal event in the history of the biosphere, and yet the underlying evolutionary features and innovations of the first land plant ancestors are not well understood. Here we present the genome sequence of the

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7859a71411be8aadd48346b62de8c6c7

Quantitative Analysis of Targeted Proteins in Complex Sample Using Novel Data Independent Acquisition

Autor: Wei Chen, Reiko Kiyonami, Wei Zhang, Zheng Jiang

Publikováno v: Chinese Journal of Analytical Chemistry. 42:1750-1758

Data Independent Acquisition (DIA) is a novel mass spectrometry (MS) scan mode for quantitative proteomics, acquiring all precursors as well as fragments without losing the low abundant ions. This method overcome the limitation of product ion quantif

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::caa06f12e5963e0bc949c9c6b82e7905
https://doi.org/10.1016/s1872-2040(14)60785-4

The C-terminal Conserved Domain of MARCKS Is Phosphorylated in Vivo by Proline-directed Protein Kinase

Autor: Reiko Kiyonami, Michiko Kanai, Hisaaki Taniguchi, Emiko Yamauchi

Publikováno v: Journal of Biological Chemistry. 273:4367-4371

MARCKS, the major protein kinase C substrate in various cells and tissues, binds to calmodulin, acidic membrane phospholipids, and actin filaments, and these interactions are regulated by protein phosphorylation. We have previously shown that MARCKS

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::633db4dd3590e9bc5638191aa63d1ea2
https://doi.org/10.1074/jbc.273.8.4367

Quantifying Peptides in Complex Mixtures with High Sensitivity and Precision Using Targeted Approach with a Hybrid Linear Ion Trap Orbitrap Mass Spectrometer

Autor: Amol Prakash, Reiko Kiyonami, Vlad Zabrouskov

Publikováno v: The FASEB Journal. 25

Introduction Hybrid ion trap-OrbitrapTM mass spectrometers are routinely used in discovery-based proteomics experiments for both identification and relative quantitation of peptides present in complex mixtures1-4. However, application of high-resolut

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::e9de72c55216d631f578b62a55058b6c
https://doi.org/10.1096/fasebj.25.1_supplement.926.3