Zobrazeno 1 - 8
of 8
pro vyhledávání: '"Rebecca K. Walters"'
Autor:
Helen M Deeks, Rebecca K Walters, Stephanie R Hare, Michael B O'Connor, Adrian J Mulholland, David R Glowacki
Publikováno v:
PLoS ONE, Vol 15, Iss 3, p e0228461 (2020)
Simulating drug binding and unbinding is a challenge, as the rugged energy landscapes that separate bound and unbound states require extensive sampling that consumes significant computational resources. Here, we describe the use of interactive molecu
Externí odkaz:
https://doaj.org/article/aba2e856f8de4d2a823980ea9b1932d7
Publikováno v:
Walters, R K, Gale, E M, Barnoud, J, Glowacki, D R & Mulholland, A J 2022, ' The emerging potential of interactive virtual reality in drug discovery ', Expert Opinion on Drug Discovery . https://doi.org/10.1080/17460441.2022.2079632
The potential of virtual reality (VR) to contribute to drug design and development has been recognised for many years. Hardware and software developments now mean that this potential is beginning to be realised, and VR methods are being actively used
Autor:
Adrian J. Mulholland, Helen M. Deeks, Rebecca K. Walters, Jonathan Barnoud, David R. Glowacki
Publikováno v:
Walters, R K, Glowacki, D R, Mulholland, A J, Deeks, H M & Barnoud, J 2020, ' Interactive Molecular Dynamics in Virtual Reality Is an Effective Tool for Flexible Substrate and Inhibitor Docking to the SARS-CoV-2 Main Protease ', Journal of Chemical Information and Modeling, vol. 60, no. 12, pp. 5803-5814 . https://doi.org/10.1021/acs.jcim.0c01030
Journal of Chemical Information and Modeling
Journal of Chemical Information and Modeling
The main protease (Mpro) of the SARS-CoV-2 virus is one focus of drug development efforts for COVID-19. Here, we show that interactive molecular dynamics in virtual reality (iMD-VR) is a useful and effective tool for creating Mpro complexes. We make
Autor:
Petra Lukacik, Victor Mikhailov, Tika R. Malla, Fernanda Duarte, Rebecca M. Twidale, Claire Strain-Damerell, Alessio Lodola, Deborah K. Shoemark, Vicent Moliner, Christopher J. Schofield, Martin A. Walsh, Helen M. Deeks, Luigi Genovese, Tobias John, Rebecca K. Walters, C. David Owen, David R. Glowacki, Garrett M. Morris, James Spencer, William Dawson, Marc A. Moesser, Adrian J. Mulholland, H. T. Henry Chan, Takahito Nakajima, Eidarus Salah, Tristan Johnston-Wood, Katarzyna Świderek, Richard B. Sessions
Publikováno v:
Chan, H T H, Moesser, M A, Walters, R K, Malla, T R, Twidale, R M, John, T, Deeks, H M, Johnston-Wood, T, Mikhailov, V, Sessions, R B, Dawson, W, Salah, E, Lukacik, P, Strain-Damerell, C, Owen, C D, Nakajima, T, Świderek, K, Lodola, A, Moliner, V, Glowacki, D R, Spencer, J, Walsh, M A, Schofield, C J, Genovese, L, Shoemark, D K, Mulholland, A J, Duarte, F & Morris, G M 2021, ' Discovery of SARS-CoV-2 Mpro peptide inhibitors from modelling substrate and ligand binding ', Chemical Science, vol. 12, no. 41, pp. 13686-13703 . https://doi.org/10.1039/D1SC03628A, https://doi.org/10.1039/d1sc03628a
The main protease (Mpro) of SARS-CoV-2 is central to viral maturation and is a promising drug target, but little is known about structural aspects of how it binds to its 11 natural cleavage sites. We used biophysical and crystallographic data and an
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::50c512a698daef6740becef11c04e70c
https://research-information.bris.ac.uk/en/publications/49ca35cb-c19f-4d6d-bcab-d61edab231ca
https://research-information.bris.ac.uk/en/publications/49ca35cb-c19f-4d6d-bcab-d61edab231ca
Autor:
Eidarus Salah, Adrian J. Mulholland, Petra Lukacik, Rebecca M. Twidale, Takahito Nakajima, Vicent Moliner, David R. Glowacki, Katarzyna Swiderek, Luigi Genovese, Claire Strain-Damerell, David R. Owen, Tristan Johnston-Wood, Richard B. Sessions, H. T. Henry Chan, Martin A. Walsh, Victor A. Mikhailov, Rebecca K. Walters, Tika R. Malla, Fernanda Duarte, Helen M. Deeks, Garrett M. Morris, William Dawson, Christopher J. Schofield, Marc A. Moesser, Tobias John, Alessio Lodola, Deborah K. Shoemark
Publikováno v:
Repositori Universitat Jaume I
Universitat Jaume I
Universitat Jaume I
The main protease (Mpro) of SARS-CoV-2 is central to its viral lifecycle and is a promising drug target, but little is known concerning structural aspects of how it binds to its 11 natural cleavage sites. We used biophysical and crystallographic data
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5cf8072372b994f2ab75956fda0782e4
Autor:
H T Henry, Chan, Marc A, Moesser, Rebecca K, Walters, Tika R, Malla, Rebecca M, Twidale, Tobias, John, Helen M, Deeks, Tristan, Johnston-Wood, Victor, Mikhailov, Richard B, Sessions, William, Dawson, Eidarus, Salah, Petra, Lukacik, Claire, Strain-Damerell, C David, Owen, Takahito, Nakajima, Katarzyna, Świderek, Alessio, Lodola, Vicent, Moliner, David R, Glowacki, James, Spencer, Martin A, Walsh, Christopher J, Schofield, Luigi, Genovese, Deborah K, Shoemark, Adrian J, Mulholland, Fernanda, Duarte, Garrett M, Morris
Publikováno v:
Chemical Science
The main protease (Mpro) of SARS-CoV-2 is central to viral maturation and is a promising drug target, but little is known about structural aspects of how it binds to its 11 natural cleavage sites. We used biophysical and crystallographic data and an
Autor:
Stephanie R. Hare, Michael B. O'Connor, Adrian J. Mulholland, David R. Glowacki, Rebecca K. Walters, Helen M. Deeks
Publikováno v:
Deeks, H M, Walters, R K, Hare, S R, O’Connor, M B, Mulholland, A J & Glowacki, D R 2020, ' Interactive molecular dynamics in virtual reality for accurate flexible protein-ligand docking ', PLoS ONE, vol. 15, no. 3, e0228461 . https://doi.org/10.1371/journal.pone.0228461
PLoS ONE
PLoS ONE, Vol 15, Iss 3, p e0228461 (2020)
PLoS ONE
PLoS ONE, Vol 15, Iss 3, p e0228461 (2020)
Simulating drug binding and unbinding is a challenge, as the rugged energy landscapes that separate bound and unbound states require extensive sampling that consumes significant computational resources. Here, we describe the use of interactive molecu
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::03c2948d37d4f744d386e1fd791f49a4
https://research-information.bris.ac.uk/ws/files/230607350/journal.pone.0228461.pdf
https://research-information.bris.ac.uk/ws/files/230607350/journal.pone.0228461.pdf
Autor:
Rebecca K. Walters, Simon J. Bennie, Robin J. Shannon, Michael B. O'Connor, Helen M. Deeks, Thomas J. Mitchell, Alex J. Jones, Alexander Jamieson-Binnie, David R. Glowacki, Adrian J. Mulholland
Publikováno v:
O'Connor, M B, Bennie, S J, Deeks, H M, Jamieson-Binnie, A, Jones, A J, Shannon, R J, Walters, R, Mitchell, T J, Mulholland, A J & Glowacki, D R 2019, ' Interactive molecular dynamics in virtual reality from quantum chemistry to drug binding : An open-source multi-person framework ', Journal of Chemical Physics, vol. 150, no. 22, 220901 . https://doi.org/10.1063/1.5092590
© 2019 Author(s). As molecular scientists have made progress in their ability to engineer nanoscale molecular structure, we face new challenges in our ability to engineer molecular dynamics (MD) and flexibility. Dynamics at the molecular scale diffe
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fbac747b0e7f823f1bfb63d1e6549960
http://arxiv.org/abs/1902.01827
http://arxiv.org/abs/1902.01827