Zobrazeno 1 - 10
of 13
pro vyhledávání: '"Rebecca Guymon"'
Publikováno v:
Biochemistry. 45:4888-4899
Posttranscriptional modification in RNA generally serves to fine-tune and regulate RNA structure and, in many cases, is relatively conserved and phylogenetically distinct. We report the complete modification map for SSU rRNA from Thermus thermophilus
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9930b8f9bf27094a0622f450d8487011
https://doi.org/10.1021/bi052579p
https://doi.org/10.1021/bi052579p
Publikováno v:
Nature Biotechnology. 23:232-237
Standard microarrays measure mRNA abundance, not mRNA synthesis, and therefore cannot identify the mechanisms that regulate gene expression. We have developed a method to overcome this limitation by using the salvage enzyme uracil phosphoribosyltrans
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::9f924f8d5241839c027ec3a56df4ea5d
https://doi.org/10.1038/nbt1061
https://doi.org/10.1038/nbt1061
Autor:
Mark Del Campo, Claudia Recinos, Steven C. Pomerantz, James Ofengand, Giscard Yanez, Rebecca Guymon, James A. McCloskey, Pamela F. Crain
Publikováno v:
RNA. 11:210-219
The number and position of the pseudouridines of Haloarcula marismortui and Deinococcus radiodurans large subunit RNA have been determined by a combination of total nucleoside analysis by HPLC-mass spectrometry and pseudouridine sequencing by the rev
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4ec14fe2a5e18a1472fe3ec62d1b5a80
https://doi.org/10.1261/rna.7209905
https://doi.org/10.1261/rna.7209905
Autor:
Rebecca Guymon, Julianne Lim, James A. McCloskey, Michael Thomm, Pamela F. Crain, Ricardo Cavicchioli, Kathleen R. Noon
Publikováno v:
Journal of Bacteriology. 185:5483-5490
The posttranscriptional processing of tRNA produces a diverse wealth of modified nucleotides (29, 30, 41), most of which occur at conserved RNA sequence locations in all three phylogenetic domains (4, 45). Many of the functional roles of these modifi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::eaa40ab3d7a72463b1f5caaa77706107
https://doi.org/10.1128/jb.185.18.5483-5490.2003
https://doi.org/10.1128/jb.185.18.5483-5490.2003
Publikováno v:
Cell. 97:491-502
We report the crystal structure of a 58 nucleotide fragment of 23S ribosomal RNA bound to ribosomal protein L11. This highly conserved ribonucleoprotein domain is the target for the thiostrepton family of antibiotics that disrupt elongation factor fu
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::eb60c04817ae61f93e85149ff18f184f
https://doi.org/10.1016/s0092-8674(00)80759-x
https://doi.org/10.1016/s0092-8674(00)80759-x
Post-transcriptional modifications of RNA are nearly ubiquitous in the principal RNAs involved in translation. However, in the case of rRNA the functional roles of modification are far less established than for tRNA, and are subject to less knowledge
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ef650f8b97ca9cafbf81b2a4b9b5418b
https://europepmc.org/articles/PMC1800508/
https://europepmc.org/articles/PMC1800508/
Autor:
Rebecca Guymon, James A. McCloskey, Steven C. Pomerantz, Vinod Nair, Tracy M. Wagner, Pamela F. Crain, Darrell R. Davis
Publikováno v:
Nucleic acids symposium series (2004). (48)
Sequence placement of post-transcriptionally modified nucleosides in tRNA can be experimentally difficult, particularly in cases involving new or unexpected modifications or sequence sites. We describe a mass spectrometry-based approach to this probl
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0ce6a98f6c86af9d3b02870ec9341642
https://pubmed.ncbi.nlm.nih.gov/17150579
https://pubmed.ncbi.nlm.nih.gov/17150579
Autor:
Shaolian Zhou, James A. McCloskey, Rebecca Guymon, Devarasetty Sitaramaiah, Kathleen R. Noon, Takeshi Hashizume
Publikováno v:
Bioorganic chemistry. 32(2)
The wyeosine (or wye) family of tricyclic ribonucleosides from archaeal and eukaryal tRNAPhe constitutes one of the most complex and interesting series of posttranscriptional RNA modifications, and has been the object of numerous studies of their che
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1ad02d70dbdb6149962a07c0a159dace
https://pubmed.ncbi.nlm.nih.gov/14990307
https://pubmed.ncbi.nlm.nih.gov/14990307
Autor:
Kathleen R, Noon, Rebecca, Guymon, Pamela F, Crain, James A, McCloskey, Michael, Thomm, Julianne, Lim, Ricardo, Cavicchioli
Publikováno v:
Journal of bacteriology. 185(18)
We report the first study of tRNA modification in psychrotolerant archaea, specifically in the archaeon Methanococcoides burtonii grown at 4 and 23 degrees C. For comparison, unfractionated tRNA from the archaeal hyperthermophile Stetteria hydrogenop
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::ed1e4a476e7b284e582c7eac6e796d21
https://pubmed.ncbi.nlm.nih.gov/12949100
https://pubmed.ncbi.nlm.nih.gov/12949100
Posttranscriptional modification of transfer RNA in the submarine hyperthermophile Pyrolobus fumarii
Autor:
Karl O. Stetter, Takeshi Hashizume, Eveline Bruenger, Xiao-Hui Liu, Pamela F. Crain, Rebecca Guymon, James A. McCloskey
Publikováno v:
Nucleic acids symposium series. (44)
In the RNA of hyperthermophiles, which grow optimally between 80 degrees C and 106 degrees C, posttranscriptional modification has been identified as a leading mechanism of structural stabilization. Particularly in the Archaeal evolutionary domain th
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::30d24e28dbe1e74e87da52a9d958b8b3
https://pubmed.ncbi.nlm.nih.gov/12903371
https://pubmed.ncbi.nlm.nih.gov/12903371