Zobrazeno 1 - 7
of 7
pro vyhledávání: '"Rebecca C Jackson"'
Autor:
Rebecca C. Jackson, James P. Balhoff, Eric Douglass, Nomi L. Harris, Christopher J. Mungall, James A. Overton
Publikováno v:
BMC Bioinformatics, Vol 20, Iss 1, Pp 1-10 (2019)
Abstract Background Ontologies are invaluable in the life sciences, but building and maintaining ontologies often requires a challenging number of distinct tasks such as running automated reasoners and quality control checks, extracting dependencies
Externí odkaz:
https://doaj.org/article/a391b5bcac9844e38d0203c524c8b7e1
Autor:
Nicole Campion Dialo, Susan M. Bello, J Allen Baron, Cynthia F. Bearer, Rebecca C. Jackson, Michelle G. Giglio, Carrie McCracken, Katharine Bisordi, Lynn M. Schriml, Carol L. Greene, Dustin Olley, Mike Schor, James B. Munro, Victor Felix, Richard Lichenstein
Publikováno v:
Nucleic Acids Research
The Human Disease Ontology (DO) (www.disease-ontology.org) database, has significantly expanded the disease content and enhanced our userbase and website since the DO’s 2018 Nucleic Acids Research DATABASE issue paper. Conservatively, based on avai
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::822dfa3e916514df33de7c58fe4fa4fc
http://europepmc.org/articles/PMC8728220
http://europepmc.org/articles/PMC8728220
Autor:
Nicolas Matentzoglu, Damien Goutte-Gattat, Shawn Zheng Kai Tan, James P Balhoff, Seth Carbon, Anita R Caron, William D Duncan, Joe E Flack, Melissa Haendel, Nomi L Harris, William R Hogan, Charles Tapley Hoyt, Rebecca C Jackson, HyeongSik Kim, Huseyin Kir, Martin Larralde, Julie A McMurry, James A Overton, Bjoern Peters, Clare Pilgrim, Ray Stefancsik, Sofia MC Robb, Sabrina Toro, Nicole A Vasilevsky, Ramona Walls, Christopher J Mungall, David Osumi-Sutherland
Similar to managing software packages, managing the ontology life cycle involves multiple complex workflows such as preparing releases, continuous quality control checking, and dependency management. To manage these processes, a diverse set of tools
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4d7b2e37807dce6a1dbb0f4b2006fc77
http://arxiv.org/abs/2207.02056
http://arxiv.org/abs/2207.02056
Autor:
Nicolas Matentzoglu, Nomi L. Harris, Christopher J. Mungall, James P. Balhoff, William D. Duncan, Seth Carbon, Lynn M. Schriml, Darren A. Natale, Ramona Walls, David Osumi-Sutherland, Randi Vita, Christian J. Stoeckert, Barry Smith, Rebecca C. Jackson, Alan Ruttenberg, Damion M. Dooley, Pier Luigi Buttigieg, Mélanie Courtot, Suzanna E. Lewis, Jie Zheng, Alexander D. Diehl, Melissa A. Haendel, James A. Overton, Bjoern Peters, Nicole Vasilevsky
Publikováno v:
Database: The Journal of Biological Databases and Curation
Biological ontologies are used to organize, curate and interpret the vast quantities of data arising from biological experiments. While this works well when using a single ontology, integrating multiple ontologies can be problematic, as they are deve
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::639afacdafb8e010eeed2105a99dfca2
https://escholarship.org/uc/item/1pr0q0n1
https://escholarship.org/uc/item/1pr0q0n1
Autor:
Damion M. Dooley, Hande Küçük McGinty, James A. Overton, Irene Y Feng, Matthew H. Brush, Christian J. Stoeckert, Michelle G. Giglio, Daniel C. Berrios, Bjoern Peters, Marcus C. Chibucos, Sagar B Jain, Mark A. Miller, Aisyah Yu Lin, Gully A. P. C. Burns, Mathias Brochhausen, Yongqun He, Randi Vita, Rebecca C. Jackson, Jie Zheng, John Judkins, Richard H. Scheuermann
Publikováno v:
Database: The Journal of Biological Databases and Curation
The Ontology for Biomedical Investigations (OBI) underwent a focused review of assay term annotations, logic and hierarchy with a goal to improve and standardize these terms. As a result, inconsistencies in W3C Web Ontology Language (OWL) expressions
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1db4ffe0bb5ae61a0c0cdd74e8eb57e1
https://doi.org/10.1093/database/baab040
https://doi.org/10.1093/database/baab040
Autor:
Randi Vita, Alessandro Sette, Lindy Edwards, Rebecca C. Jackson, Nina Blazeska, James A. Overton, Bjoern Peters
Publikováno v:
Database: The Journal of Biological Databases and Curation
The Immune Epitope Database (IEDB) freely provides experimental data regarding immune epitopes to the scientific public. The main users of the IEDB are immunologists who can easily use our web interface to search for peptidic epitopes via their simpl
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e7be5d3e2e769e7ad9ecb96a3fd42e54
https://doi.org/10.1093/database/baab014
https://doi.org/10.1093/database/baab014
Autor:
Nomi L. Harris, Christopher J. Mungall, James A. Overton, Eric Douglass, James P. Balhoff, Rebecca C. Jackson
Publikováno v:
BMC Bioinformatics
BMC bioinformatics, vol 20, iss 1
BMC Bioinformatics, Vol 20, Iss 1, Pp 1-10 (2019)
BMC bioinformatics, vol 20, iss 1
BMC Bioinformatics, Vol 20, Iss 1, Pp 1-10 (2019)
Background Ontologies are invaluable in the life sciences, but building and maintaining ontologies often requires a challenging number of distinct tasks such as running automated reasoners and quality control checks, extracting dependencies and appli
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b8fae0bd11d9366d44348fe2eabee650
http://europepmc.org/articles/PMC6664714
http://europepmc.org/articles/PMC6664714