Zobrazeno 1 - 10
of 19
pro vyhledávání: '"Rashmi R Hazarika"'
Autor:
Jered M Wendte, Yinwen Zhang, Lexiang Ji, Xiuling Shi, Rashmi R Hazarika, Yadollah Shahryary, Frank Johannes, Robert J Schmitz
Publikováno v:
eLife, Vol 8 (2019)
In many plant species, a subset of transcribed genes are characterized by strictly CG-context DNA methylation, referred to as gene body methylation (gbM). The mechanisms that establish gbM are unclear, yet flowering plant species naturally without gb
Externí odkaz:
https://doaj.org/article/40aca837939346de9e740d3baac1a883
Publikováno v:
PLoS ONE, Vol 13, Iss 10, p e0205179 (2018)
Several recent studies indicate that small Open Reading Frames (sORFs) embedded within multiple eukaryotic non-coding RNAs can be translated into bioactive peptides of up to 100 amino acids in size. However, the functional roles of the 607 Stress Ind
Externí odkaz:
https://doaj.org/article/5d815b579a36484196f5bb7b8d7ac8d1
Autor:
Piero Giansanti, Patroklos Samaras, Yangyang Bian, Chen Meng, Andrea Coluccio, Martin Frejno, Hannah Jakubowsky, Sophie Dobiasch, Rashmi R. Hazarika, Julia Rechenberger, Julia Calzada-Wack, Johannes Krumm, Sebastian Mueller, Chien-Yun Lee, Nicole Wimberger, Ludwig Lautenbacher, Zonera Hassan, Yun-Chien Chang, Chiara Falcomatà, Florian P. Bayer, Stefanie Bärthel, Tobias Schmidt, Roland Rad, Stephanie E. Combs, Matthew The, Frank Johannes, Dieter Saur, Martin Hrabe de Angelis, Mathias Wilhelm, Günter Schneider, Bernhard Kuster
Publikováno v:
Nat. Methods 19, 803-811 (2022)
The laboratory mouse ranks among the most important experimental systems for biomedical research and molecular reference maps of such models are essential informational tools. Here, we present a quantitative draft of the mouse proteome and phosphopro
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c5ffb4ed21f9b0341e74120813d93339
https://pubmed.ncbi.nlm.nih.gov/35739311
https://pubmed.ncbi.nlm.nih.gov/35739311
Autor:
Rashmi R. Hazarika, Frank Becker, Frank Johannes, Ric C. H. de Vos, Lionel Morgado, Qunfeng Zheng, Henriëtte D. L. M. van Eekelen, Rik Kooke, Joost J. B. Keurentjes
Publikováno v:
Genome Research, 29(1), 96-106. COLD SPRING HARBOR LAB PRESS, PUBLICATIONS DEPT
Genome Research 29 (2019) 1
Genome Research, 29(1), 96-106
Genome Research 29 (2019) 1
Genome Research, 29(1), 96-106
Identifying the sources of natural variation underlying metabolic differences between plants will enable a better understanding of plant metabolism and provide insights into the regulatory networks that govern plant growth and morphology. So far, how
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7d62a4c59e300f2e627f84a1b0dc8516
https://doi.org/10.1101/gr.232371.117
https://doi.org/10.1101/gr.232371.117
Autor:
Anna Lipzen, Jayson Talag, Shengqiang Shu, Johanna Denkena, Frank Johannes, Avinash Sreedasyam, Rashmi R. Hazarika, Daniel Jacobsen, Jeremy Schmutz, Robert J. Schmitz, Sujan Mamidi, Paul P. Grabowski, Brigitte T. Hofmeister, Rod A. Wing, Yadollah Shahryary, Gerald A. Tuskan, Catherine Adam, David W. Hall, Dave Kudrna, Rotem Sorek, Maria Colomé-Tatché, Jane Grimwood, Kerrie Barry, Jerry Jenkins, Kathleen Lail
Publikováno v:
Genome biology, vol 21, iss 1
Genome Biology
Genome Biology, 21(1):259. BMC
Genome Biol. 21:259 (2020)
Genome Biology, Vol 21, Iss 1, Pp 1-27 (2020)
Genome Biology
Genome Biology, 21(1):259. BMC
Genome Biol. 21:259 (2020)
Genome Biology, Vol 21, Iss 1, Pp 1-27 (2020)
Background Plants can transmit somatic mutations and epimutations to offspring, which in turn can affect fitness. Knowledge of the rate at which these variations arise is necessary to understand how plant development contributes to local adaption in
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9662bacccd8965246e4017a212241f2c
https://doi.org/10.1186/s13059-020-02162-5
https://doi.org/10.1186/s13059-020-02162-5
Autor:
Rashmi R. Hazarika, Arezoo Rahimi, Majid Khan, Vera van Noort, Remko Offringa, Marian Bemer, Patrick Mak, Omid Karami, Monique Compier
Publikováno v:
Nature Plants, 6, 368-376. NATURE PUBLISHING GROUP
Nature Plants 6 (2020) 4
Nature Plants, 6(4), 368-376
Nature Plants 6 (2020) 4
Nature Plants, 6(4), 368-376
The AHL15 transcription factor is a repressor of axillary meristem maturation. AHL15 is downstream of flowering genes and prolongs the vegetative growth and longevity of plants, particularly monocarps such as Arabidopsis thaliana.Post-embryonic devel
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d581a0786250ddb3c710f93c6acaa9b4
http://hdl.handle.net/1887/3157081
http://hdl.handle.net/1887/3157081
Autor:
Martin Frejno, Tobias Schmidt, Xia Chen, Rashmi R. Hazarika, Sandra Richter, Daniel Lang, Philipp Cyprys, Stefanie Sprunck, Thomas Hofmann, Markus List, Marcus Bantscheff, Bernhard Kuster, Ajeet Chaudhary, Kay Schneitz, Patroklos Samaras, Gerd Jürgens, Daniel P Zolg, Stefan Altmann, Mathias Wilhelm, Corinna Dawid, Pascal Falter-Braun, Jan Baumbach, Maxim Messerer, Andreas Dunkel, Hiromasa Shikata, Michael Papacek, Claus Schwechheimer, Toby Mathieson, Erwin Grill, Frank Johannes, Julia Mergner, Klaus F. X. Mayer
Publikováno v:
Nature 579, 409-414 (2020)
Plants are essential for life and are extremely diverse organisms with unique molecular capabilities(1). Here we present a quantitative atlas of the transcriptomes, proteomes and phosphoproteomes of 30 tissues of the model plant Arabidopsis thaliana.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2848591b4792f8806eb3767d4e3420fc
https://push-zb.helmholtz-muenchen.de/frontdoor.php?source_opus=58639
https://push-zb.helmholtz-muenchen.de/frontdoor.php?source_opus=58639
Autor:
Robert J. Schmitz, Sujan Mamidi, Anna Lipzen, Rod A. Wing, Shengqiang Shu, Kathleen Lail, Jerry Jenkins, Kerrie Barry, Johanna Denkena, Frank Johannes, Rashmi R. Hazarika, Avinash Sreedasyam, Maria Colomé-Tatché, Dave Kudrna, Jane Grimwood, Jeremy Schmutz, Rotem Sorek, Catherine Adam, David W. Hall, Paul P. Grabowski, Brigitte T. Hofmeister, Gerald A. Tuskan, Yadollah Shahryary, Jayson Talag
BackgroundPlants can transmit somatic mutations and epimutations to offspring, which in turn can affect fitness. Knowledge of the rate at which these variations arise is necessary to understand how plant development contributes to local adaption in a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e7b5c67ad50bbe1b6ecd71682cd56615
Autor:
Thomas P. van Gurp, Frank Johannes, Robert J. Schmitz, Koen J. F. Verhoeven, Johanna Denkena, Gerald A. Tuskan, Rashmi R. Hazarika, Maria Colomé-Tatché, Yadollah Shahryary, Aikaterini Symeonidi, Brigitte T. Hofmeister, Talha Mubeen
Publikováno v:
Genome Biology
Genome Biology, 21(1):260. BMC
Genome Biology, 21(1):260. BioMed Central
Genome Biology, Vol 21, Iss 1, Pp 1-22 (2020)
Genome Biol. 21:33023650 (2020)
Genome Biology, 21(1):260. BMC
Genome Biology, 21(1):260. BioMed Central
Genome Biology, Vol 21, Iss 1, Pp 1-22 (2020)
Genome Biol. 21:33023650 (2020)
IntroductionHeritable changes in cytosine methylation can arise stochastically in plant genomes independently of DNA sequence alterations. These so-called ‘spontaneous epimutations’ appear to be a byproduct of imperfect DNA methylation maintenanc
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7026c064dae16592596666ff20490fcd