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of 545
pro vyhledávání: '"Raphael Benjamin J"'
Optimal transport (OT) is a general framework for finding a minimum-cost transport plan, or coupling, between probability distributions, and has many applications in machine learning. A key challenge in applying OT to massive datasets is the quadrati
Externí odkaz:
http://arxiv.org/abs/2411.10555
Autor:
Zitnik, Marinka, Li, Michelle M., Wells, Aydin, Glass, Kimberly, Gysi, Deisy Morselli, Krishnan, Arjun, Murali, T. M., Radivojac, Predrag, Roy, Sushmita, Baudot, Anaïs, Bozdag, Serdar, Chen, Danny Z., Cowen, Lenore, Devkota, Kapil, Gitter, Anthony, Gosline, Sara, Gu, Pengfei, Guzzi, Pietro H., Huang, Heng, Jiang, Meng, Kesimoglu, Ziynet Nesibe, Koyuturk, Mehmet, Ma, Jian, Pico, Alexander R., Pržulj, Nataša, Przytycka, Teresa M., Raphael, Benjamin J., Ritz, Anna, Sharan, Roded, Shen, Yang, Singh, Mona, Slonim, Donna K., Tong, Hanghang, Yang, Xinan Holly, Yoon, Byung-Jun, Yu, Haiyuan, Milenković, Tijana
Network biology is an interdisciplinary field bridging computational and biological sciences that has proved pivotal in advancing the understanding of cellular functions and diseases across biological systems and scales. Although the field has been a
Externí odkaz:
http://arxiv.org/abs/2309.08478
Autor:
Schmidt, Henri1 (AUTHOR), Raphael, Benjamin J.1 (AUTHOR) braphael@princeton.edu
Publikováno v:
PLoS Computational Biology. 12/4/2024, Vol. 20 Issue 12, p1-24. 24p.
Publikováno v:
BMC Bioinformatics, Vol 13, Iss Suppl 6, p S10 (2012)
Abstract Background A cancer genome is derived from the germline genome through a series of somatic mutations. Somatic structural variants - including duplications, deletions, inversions, translocations, and other rearrangements - result in a cancer
Externí odkaz:
https://doaj.org/article/2bcc267eeca94be09f36f4f746ce6349
Anomaly estimation, or the problem of finding a subset of a dataset that differs from the rest of the dataset, is a classic problem in machine learning and data mining. In both theoretical work and in applications, the anomaly is assumed to have a sp
Externí odkaz:
http://arxiv.org/abs/2007.07878
Akademický článek
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Akademický článek
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Publikováno v:
Algorithms for Molecular Biology, Vol 7, Iss 1, p 23 (2012)
Abstract Background Cancer sequencing projects are now measuring somatic mutations in large numbers of cancer genomes. A key challenge in interpreting these data is to distinguish driver mutations, mutations important for cancer development, from pas
Externí odkaz:
https://doaj.org/article/b49898a60c7d41c3987d11091ca9fd3e
Publikováno v:
BMC Bioinformatics, Vol 13, Iss 1, p 28 (2012)
Abstract Background Polymorphic inversions are a source of genetic variability with a direct impact on recombination frequencies. Given the difficulty of their experimental study, computational methods have been developed to infer their existence in
Externí odkaz:
https://doaj.org/article/9aaaa7ccd02d4fa894f17c361b1ba9fb