Zobrazeno 1 - 10
of 15
pro vyhledávání: '"Randi Holm Jensen"'
Autor:
Mathis Hjort Hjelmsø, Sarah Mollerup, Randi Holm Jensen, Carlotta Pietroni, Oksana Lukjancenko, Anna Charlotte Schultz, Frank M Aarestrup, Anders Johannes Hansen
Publikováno v:
PLoS ONE, Vol 14, Iss 1, p e0210368 (2019)
Human viral pathogens are a major public health threat. Reliable information that accurately describes and characterizes the global occurrence and transmission of human viruses is essential to support national and global priority setting, public heal
Externí odkaz:
https://doaj.org/article/18075055f199452fabe040754a5d19ed
Autor:
Thomas Arn Hansen, Sarah Mollerup, Nam-phuong Nguyen, Nicole E White, Megan Coghlan, David E Alquezar-Planas, Tejal Joshi, Randi Holm Jensen, Helena Fridholm, Kristín Rós Kjartansdóttir, Tobias Mourier, Tandy Warnow, Graham J Belsham, Michael Bunce, Eske Willerslev, Lars Peter Nielsen, Lasse Vinner, Anders Johannes Hansen
Publikováno v:
Emerging Microbes and Infections, Vol 5, Iss 1, Pp 1-8 (2016)
Outbreaks of zoonotic diseases in humans and livestock are not uncommon, and an important component in containment of such emerging viral diseases is rapid and reliable diagnostics. Such methods are often PCR-based and hence require the availability
Externí odkaz:
https://doaj.org/article/8398c3614bd44a2f917b4b5cd5f78ca1
Autor:
Randi Holm Jensen, Sarah Mollerup, Tobias Mourier, Thomas Arn Hansen, Helena Fridholm, Lars Peter Nielsen, Eske Willerslev, Anders Johannes Hansen, Lasse Vinner
Publikováno v:
PLoS ONE, Vol 10, Iss 4, p e0122636 (2015)
Viral infections cause many different diseases stemming both from well-characterized viral pathogens but also from emerging viruses, and the search for novel viruses continues to be of great importance. High-throughput sequencing is an important tech
Externí odkaz:
https://doaj.org/article/209d9f134330463b8cacda183e9415db
Autor:
Jens Friis-Nielsen, Kristín Rós Kjartansdóttir, Sarah Mollerup, Maria Asplund, Tobias Mourier, Randi Holm Jensen, Thomas Arn Hansen, Alba Rey-Iglesia, Stine Raith Richter, Ida Broman Nielsen, David E. Alquezar-Planas, Pernille V. S. Olsen, Lasse Vinner, Helena Fridholm, Lars Peter Nielsen, Eske Willerslev, Thomas Sicheritz-Pontén, Ole Lund, Anders Johannes Hansen, Jose M. G. Izarzugaza, Søren Brunak
Publikováno v:
Viruses, Vol 8, Iss 2, p 53 (2016)
Virus discovery from high throughput sequencing data often follows a bottom-up approach where taxonomic annotation takes place prior to association to disease. Albeit effective in some cases, the approach fails to detect novel pathogens and remote va
Externí odkaz:
https://doaj.org/article/75912c2609a04407bf20a51d474a1a95
Autor:
Julie Teresa Shapiro, Sarah Mollerup, Randi Holm Jensen, Jill Katharina Olofsson, Nam-phuong D. Nguyen, Thomas Arn Hansen, Lasse Vinner, Ara Monadjem, Robert A. McCleery, Anders J. Hansen
Publikováno v:
Shapiro, J T, Mollerup, S, Jensen, R H, Olofsson, J K, Nguyen, N D, Hansen, T A, Vinner, L, Monadjem, A, McCleery, R A & Hansen, A J 2021, ' Metagenomic Analysis Reveals Previously Undescribed Bat Coronavirus Strains in Eswatini ', EcoHealth, vol. 18, no. 4, pp. 421-428 . https://doi.org/10.1007/s10393-021-01567-3
Ecohealth
Ecohealth
We investigated the prevalence of coronaviruses in 44 bats from four families in northeastern Eswatini using high-throughput sequencing of fecal samples. We found evidence of coronaviruses in 18% of the bats. We recovered full or near-full-length gen
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::89cec0655e2b6de9be4f01fd6b111c0d
https://curis.ku.dk/portal/da/publications/metagenomic-analysis-reveals-previously-undescribed-bat-coronavirus-strains-in-eswatini(15fe3b60-ee66-4bea-9046-e188f6fe14de).html
https://curis.ku.dk/portal/da/publications/metagenomic-analysis-reveals-previously-undescribed-bat-coronavirus-strains-in-eswatini(15fe3b60-ee66-4bea-9046-e188f6fe14de).html
Autor:
Zsolt Baranyai, Karen Dybkær, David Hebbelstrup Jensen, Imre Pete, Sarah Mollerup, Lasse Vinner, Ewa Rajpert-De Meyts, Kristín Rós Kjartansdóttir, Eske Willerslev, Thomas Arn Hansen, Stine Raith Richter, Robert Gniadecki, Carlotta Pietroni, Jacob Rosenberg, Alba Rey-Iglesia, David E. Alquezar-Planas, Pernille V. S. Olsen, Jill Levin Langhoff, Ildikó Vereczkey, Ida Broman Nielsen, Jose Alejandro Romero Herrera, Peter Hokland, Anders J. Hansen, Søren Brunak, Maria Asplund, Estrid Høgdall, Hans Erik Johnsen, Line Groth-Pedersen, Thomas Sicheritz-Pontén, Jose M. G. Izarzugaza, Ulrik Baandrup, Randi Holm Jensen, Torben Steiniche, Christian von Buchwald, Jens Friis-Nielsen, Helena Fridholm, Ole Lund, Tobias Mourier, Christopher Barnes, Lars Peter Nielsen
Publikováno v:
Mollerup, S, Asplund, M, Friis-Nielsen, J, Kjartansdóttir, K R, Fridholm, H, Hansen, T A, Herrera, J A R, Barnes, C J, Jensen, R H, Richter, S R, Nielsen, I B, Pietroni, C, Alquezar-Planas, D E, Rey-Iglesia, A, Olsen, P V S, De Meyts, E R, Groth-Pedersen, L, von Buchwald, C, Jensen, D H, Gniadecki, R, Høgdall, E, Langhoff, J L, Pete, I, Vereczkey, I, Baranyai, Z, Dybkaer, K, Johnsen, H E, Steiniche, T, Hokland, P, Rosenberg, J, Baandrup, U, Sicheritz-Pontén, T, Willerslev, E, Brunak, S, Lund, O, Mourier, T, Vinner, L, Izarzugaza, J M G, Nielsen, L P & Hansen, A J 2019, ' High-throughput sequencing-based investigation of viruses in human cancers by multi-enrichment approach ', The Journal of Infectious Diseases, vol. 220, no. 8, pp. 1312-1324 . https://doi.org/10.1093/infdis/jiz318
Mollerup, S, Asplund, M, Friis-Nielsen, J, Kjartansdóttir, K R, Fridholm, H, Hansen, T A, Herrera, J A R, Barnes, C J, Jensen, R H, Richter, S R, Nielsen, I B, Pietroni, C, Alquezar-Planas, D E, Rey-Iglesia, A, Olsen, P V S, Rajpert-De Meyts, E, Groth-Pedersen, L, von Buchwald, C, Jensen, D H, Gniadecki, R, Høgdall, E, Langhoff, J L, Pete, I, Vereczkey, I, Baranyai, Z, Dybkaer, K, Johnsen, H E, Steiniche, T, Hokland, P, Rosenberg, J, Baandrup, U, Sicheritz-Pontén, T, Willerslev, E, Brunak, S, Lund, O, Mourier, T, Vinner, L, Izarzugaza, J M G, Nielsen, L P & Hansen, A J 2019, ' High-Throughput Sequencing-Based Investigation of Viruses in Human Cancers by Multienrichment Approach ', The Journal of Infectious Diseases, vol. 220, no. 8, pp. 1312-1324 . https://doi.org/10.1093/infdis/jiz318
The Journal of Infectious Diseases
Mollerup, S, Asplund, M, Friis-Nielsen, J, Kjartansdóttir, K R, Fridholm, H, Hansen, T A, Herrera, J A R, Barnes, C J, Jensen, R H, Richter, S R, Nielsen, I B, Pietroni, C, Alquezar-Planas, D E, Rey-Iglesia, A, Olsen, P V S, Rajpert-De Meyts, E, Groth-Pedersen, L, von Buchwald, C, Jensen, D H, Gniadecki, R, Høgdall, E, Langhoff, J L, Pete, I, Vereczkey, I, Baranyai, Z, Dybkaer, K, Johnsen, H E, Steiniche, T, Hokland, P, Rosenberg, J, Baandrup, U, Sicheritz-Pontén, T, Willerslev, E, Brunak, S, Lund, O, Mourier, T, Vinner, L, Izarzugaza, J M G, Nielsen, L P & Hansen, A J 2019, ' High-throughput sequencing-based investigation of viruses in human cancers by multi-enrichment approach ', Journal of Infectious Diseases, vol. 220, no. 8, pp. 1312-1324 . https://doi.org/10.1093/infdis/jiz318
Mollerup, S, Asplund, M, Friis-Nielsen, J, Kjartansdóttir, K R, Fridholm, H, Hansen, T A, Herrera, J A R, Barnes, C J, Jensen, R H, Richter, S R, Nielsen, I B, Pietroni, C, Alquezar-Planas, D E, Rey-Iglesia, A, Olsen, P V S, Rajpert-De Meyts, E, Groth-Pedersen, L, von Buchwald, C, Jensen, D H, Gniadecki, R, Høgdall, E, Langhoff, J L, Pete, I, Vereczkey, I, Baranyai, Z, Dybkaer, K, Johnsen, H E, Steiniche, T, Hokland, P, Rosenberg, J, Baandrup, U, Sicheritz-Pontén, T, Willerslev, E, Brunak, S, Lund, O, Mourier, T, Vinner, L, Izarzugaza, J M G, Nielsen, L P & Hansen, A J 2019, ' High-Throughput Sequencing-Based Investigation of Viruses in Human Cancers by Multienrichment Approach ', The Journal of Infectious Diseases, vol. 220, no. 8, pp. 1312-1324 . https://doi.org/10.1093/infdis/jiz318
The Journal of Infectious Diseases
Mollerup, S, Asplund, M, Friis-Nielsen, J, Kjartansdóttir, K R, Fridholm, H, Hansen, T A, Herrera, J A R, Barnes, C J, Jensen, R H, Richter, S R, Nielsen, I B, Pietroni, C, Alquezar-Planas, D E, Rey-Iglesia, A, Olsen, P V S, Rajpert-De Meyts, E, Groth-Pedersen, L, von Buchwald, C, Jensen, D H, Gniadecki, R, Høgdall, E, Langhoff, J L, Pete, I, Vereczkey, I, Baranyai, Z, Dybkaer, K, Johnsen, H E, Steiniche, T, Hokland, P, Rosenberg, J, Baandrup, U, Sicheritz-Pontén, T, Willerslev, E, Brunak, S, Lund, O, Mourier, T, Vinner, L, Izarzugaza, J M G, Nielsen, L P & Hansen, A J 2019, ' High-throughput sequencing-based investigation of viruses in human cancers by multi-enrichment approach ', Journal of Infectious Diseases, vol. 220, no. 8, pp. 1312-1324 . https://doi.org/10.1093/infdis/jiz318
Background Viruses and other infectious agents cause more than 15% of human cancer cases. High-throughput sequencing-based studies of virus-cancer associations have mainly focused on cancer transcriptome data. Methods In this study, we applied a dive
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::389b6f096418f08500be47e5d37af82a
https://vbn.aau.dk/da/publications/a8b6be0c-34de-4fcf-b6ef-ab0d8ac39650
https://vbn.aau.dk/da/publications/a8b6be0c-34de-4fcf-b6ef-ab0d8ac39650
Autor:
Randi Holm Jensen, Frank Møller Aarestrup, Anna Charlotte Schultz, Sarah Mollerup, Anders J. Hansen, Carlotta Pietroni, Mathis Hjort Hjelmsø, Oksana Lukjancenko
Publikováno v:
PLOS ONE
Hjelmso, M H, Mollerup, S, Jensen, R H, Pietroni, C, Lukjancenko, O, Schultz, A C, Aarestrup, F M & Hansen, A J 2019, ' Metagenomic analysis of viruses in toilet waste from long distance flights-A new procedure for global infectious disease surveillance ', PLoS ONE, vol. 14, no. 1, e0210368 . https://doi.org/10.1371/journal.pone.0210368
PLoS ONE, Vol 14, Iss 1, p e0210368 (2019)
Hjelmsø, M H, Mollerup, S, Jensen, R H, Pietroni, C, Lukjancenko, O, Schultz, A C, Møller Aarestrup, F & Hansen, A J 2019, ' Metagenomic analysis of viruses in toilet waste from long distance flights—A new procedure for global infectious disease surveillance ', PLOS ONE, vol. 14, no. 1, e0210368 . https://doi.org/10.1371/journal.pone.0210368
PLoS ONE
Hjelmso, M H, Mollerup, S, Jensen, R H, Pietroni, C, Lukjancenko, O, Schultz, A C, Aarestrup, F M & Hansen, A J 2019, ' Metagenomic analysis of viruses in toilet waste from long distance flights-A new procedure for global infectious disease surveillance ', PLoS ONE, vol. 14, no. 1, e0210368 . https://doi.org/10.1371/journal.pone.0210368
PLoS ONE, Vol 14, Iss 1, p e0210368 (2019)
Hjelmsø, M H, Mollerup, S, Jensen, R H, Pietroni, C, Lukjancenko, O, Schultz, A C, Møller Aarestrup, F & Hansen, A J 2019, ' Metagenomic analysis of viruses in toilet waste from long distance flights—A new procedure for global infectious disease surveillance ', PLOS ONE, vol. 14, no. 1, e0210368 . https://doi.org/10.1371/journal.pone.0210368
PLoS ONE
Human viral pathogens are a major public health threat. Reliable information that accurately describes and characterizes the global occurrence and transmission of human viruses is essential to support national and global priority setting, public heal
Autor:
David E. Alquezar-Planas, Thomas Sicheritz-Pontén, Stine Raith Richter, Helena Fridholm, Lars Peter Nielsen, Jose Alejandro Romero Herrera, Jens Friis-Nielsen, Sarah Mollerup, Alba Rey-Iglesia, Ole Lund, Maria Asplund, Søren Brunak, Jose M. G. Izarzugaza, Kristín Rós Kjartansdóttir, Ida Broman Nielsen, Pernille V. S. Olsen, Maria Luisa Matey-Hernandez, Tobias Mourier, Anders J. Hansen, Lasse Vinner, Eske Willerslev, Thomas Arn Hansen, Randi Holm Jensen
Publikováno v:
Asplund, M, Kjartansdóttir, K R, Mollerup, S, Vinner, L, Fridholm, H, Herrera, J A R, Friis-Nielsen, J, Hansen, T A, Jensen, R H, Nielsen, I B, Richter, S R, Rey-Iglesia, A, Matey-Hernandez, M L, Alquezar-Planas, D E, Olsen, P V S, Sicheritz-Pontén, T, Willerslev, E, Lund, O, Brunak, S, Mourier, T, Nielsen, L P, Izarzugaza, J M G & Hansen, A J 2019, ' Contaminating viral sequences in high-throughput sequencing viromics : a linkage study of 700 sequencing libraries ', Clinical Microbiology and Infection, vol. 25, no. 10, pp. 1277-1285 . https://doi.org/10.1016/j.cmi.2019.04.028
Asplund, M, Kjartansdóttir, K R, Mollerup, S, Vinner, L, Fridholm, H, Herrera, J A R, Friis-Nielsen, J, Hansen, T A, Jensen, R H, Nielsen, I B, Richter, S R, Rey-Iglesia, A, Matey-Hernandez, M L, Alquezar-Planas, D E, Olsen, P V S, Sicheritz-Pontén, T, Willerslev, E, Lund, O, Brunak, S, Mourier, T, Nielsen, L P, Izarzugaza, J M G & Hansen, A J 2019, ' Contaminating viral sequences in high-throughput sequencing viromics: a linkage study of 700 sequencing libraries ', Clinical Microbiology and Infection, vol. 25, no. 10, pp. 1277-1285 . https://doi.org/10.1016/j.cmi.2019.04.028
Asplund, M, Kjartansdóttir, K R, Mollerup, S, Vinner, L, Fridholm, H, Herrera, J A R, Friis-Nielsen, J, Hansen, T A, Jensen, R H, Nielsen, I B, Richter, S R, Rey-Iglesia, A, Matey-Hernandez, M L, Alquezar-Planas, D E, Olsen, P V S, Sicheritz-Pontén, T, Willerslev, E, Lund, O, Brunak, S, Mourier, T, Nielsen, L P, Izarzugaza, J M G & Hansen, A J 2019, ' Contaminating viral sequences in high-throughput sequencing viromics: a linkage study of 700 sequencing libraries ', Clinical Microbiology and Infection, vol. 25, no. 10, pp. 1277-1285 . https://doi.org/10.1016/j.cmi.2019.04.028
Objectives Sample preparation for high-throughput sequencing (HTS) includes treatment with various laboratory components, potentially carrying viral nucleic acids, the extent of which has not been thoroughly investigated. Our aim was to systematicall
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2dedc2a938c48e2658f687f847f4dcd6
https://curis.ku.dk/ws/files/229271333/1_s2.0_S1198743X1930206X_main.pdf
https://curis.ku.dk/ws/files/229271333/1_s2.0_S1198743X1930206X_main.pdf
Autor:
Eske Willerslev, Thomas Arn Hansen, Lasse Vinner, Kristín Rós Kjartansdóttir, Michael Bunce, Sarah Mollerup, Tandy Warnow, Lars Peter Nielsen, Megan L. Coghlan, Anders J. Hansen, Nicole White, Helena Fridholm, David E. Alquezar-Planas, Tobias Mourier, Randi Holm Jensen, Graham J. Belsham, Nam Nguyen, Tejal Joshi
Publikováno v:
Emerging Microbes & Infections
Arn Hansen, T, Mollerup, S, Nguyen, N-P, White, N E, Coghlan, M, Alquezar-Planas, D E, Joshi, T, Jensen, R H, Fridholm, H, Kjartansdóttir, K R, Mourier, T, Warnow, T, Belsham, G, Bunce, M, Willerslev, E, Nielsen, L P, Vinner, L & Hansen, A J 2016, ' High diversity of picornaviruses in rats from different continents revealed by deep sequencing ', Emerging Microbes & Infections, vol. 5, no. 8, e90 . https://doi.org/10.1038/emi.2016.90
Hansen, T A, Mollerup, S, Nam-phuong Nguyen, White, N E, Coghlan, M, Alquezar Planas, D E, Joshi, T, Jensen, R H, Fridholm, E M H, Kjartansdóttir, K R, Mourier, T, Warnow, T, Belsham, G J, Bunce, M, Willerslev, E, Nielsen, L P, Vinner, L & Hansen, A J 2016, ' High diversity of picornaviruses in rats from different continents revealed by deep sequencing ', Emerging Microbes & Infections, vol. 5, e90 . https://doi.org/10.1038/emi.2016.90
Arn Hansen, T, Mollerup, S, Nguyen, N-P, White, N E, Coghlan, M, Alquezar-Planas, D E, Joshi, T, Jensen, R H, Fridholm, H, Kjartansdóttir, K R, Mourier, T, Warnow, T, Belsham, G, Bunce, M, Willerslev, E, Nielsen, L P, Vinner, L & Hansen, A J 2016, ' High diversity of picornaviruses in rats from different continents revealed by deep sequencing ', Emerging Microbes & Infections, vol. 5, no. 8, e90 . https://doi.org/10.1038/emi.2016.90
Hansen, T A, Mollerup, S, Nam-phuong Nguyen, White, N E, Coghlan, M, Alquezar Planas, D E, Joshi, T, Jensen, R H, Fridholm, E M H, Kjartansdóttir, K R, Mourier, T, Warnow, T, Belsham, G J, Bunce, M, Willerslev, E, Nielsen, L P, Vinner, L & Hansen, A J 2016, ' High diversity of picornaviruses in rats from different continents revealed by deep sequencing ', Emerging Microbes & Infections, vol. 5, e90 . https://doi.org/10.1038/emi.2016.90
Outbreaks of zoonotic diseases in humans and livestock are not uncommon, and an important component in containment of such emerging viral diseases is rapid and reliable diagnostics. Such methods are often PCR-based and hence require the availability
Autor:
Alex D. Greenwood, Jan Axtner, Randi Holm Jensen, Ida Bærholm Schnell, M. Thomas P. Gilbert, Marie-Louise Kampmann, Andreas Wilting, Mads F. Bertelsen, Adam F. Sander, Anders J. Hansen
Publikováno v:
European Journal of Wildlife Research. 63
Surveillance of wild vertebrates can be challenging in remote and inaccessible areas such as tropical rainforests. Blood-feeding parasites, such as leeches, can facilitate wild vertebrate monitoring by targeting residual DNA from the animals the leec