Zobrazeno 1 - 10
of 10
pro vyhledávání: '"Randall K. Garber"'
Autor:
Mark A. Batzer, Kyudong Han, Dale J. Hedges, Richard Cordaux, Randall K. Garber, Hui Wang, Jinchuan Xing
Publikováno v:
Genome Research. 15:655-664
Alu elements are the most successful SINEs (Short INterspersed Elements) in primate genomes and have reached more than 1,000,000 copies in the human genome. The amplification of most Alu elements is thought to occur through a limited number of hypera
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a00d803fcc2cdfbad402acf8424ff283
https://doi.org/10.1101/gr.3492605
https://doi.org/10.1101/gr.3492605
Autor:
Randall K. Garber, Scott W. Herke, Jianxin Wang, Ping Liang, Mark A. Batzer, Pauline A. Callinan
Publikováno v:
Journal of Molecular Biology. 348:791-800
Alu repeats contribute to genomic instability in primates via insertional and recombinational mutagenesis. Here, we report an analysis of Alu element-induced genomic instability through a novel mechanism termed retrotransposition-mediated deletion, a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e01d37dd5af99bcaa516fdcf41483ca5
https://doi.org/10.1016/j.jmb.2005.02.043
https://doi.org/10.1016/j.jmb.2005.02.043
Publikováno v:
Cytogenetic and Genome Research. 110:537-542
Members of the Alu Yc1 subfamily are distinguished from the older Alu Y subfamily by a signature G→A substitution at base 148 of their 281-bp consensus sequence. Members of the much older and larger Alu Y subfamily could have by chance accumulated
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::e198778b5f8136dba1582c1a496f3710
https://doi.org/10.1159/000084986
https://doi.org/10.1159/000084986
Autor:
David J. Witherspoon, David A. Ray, Abdel Halim Salem, Mark A. Batzer, Lynn B. Jorde, Randall K. Garber, Dale J. Hedges, Jinchuan Xing, Pauline A. Callinan, Jeremy S. Myers
Publikováno v:
Proceedings of the National Academy of Sciences. 100:12787-12791
Alu elements have inserted in primate genomes throughout the evolution of the order. One particular Alu lineage (Ye) began amplifying relatively early in hominid evolution and continued propagating at a low level as many of its members are found in a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f6107fb102e6e661102ccbe92bb7618f
https://doi.org/10.1073/pnas.2133766100
https://doi.org/10.1073/pnas.2133766100
Autor:
Abdel Halim Salem, Astrid M. Roy-Engel, Randall K. Garber, Son V. Nguyen, Prescott L. Deininger, Erika Vogel, Marion L. Carroll, Mark A. Batzer
Publikováno v:
Genetics. 159:279-290
Genomic database mining has been a very useful aid in the identification and retrieval of recently integrated Alu elements from the human genome. We analyzed Alu elements retrieved from the GenBank database and identified two new Alu subfamilies, Alu
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a0e277bb8f0baa7af91a7424c35e934b
https://doi.org/10.1093/genetics/159.1.279
https://doi.org/10.1093/genetics/159.1.279
Autor:
David A. Ray, Nadica Stoilova, Mark A. Batzer, Randall K. Garber, Jerilyn A. Walker, Cheney H. Huang, Anthony B. Carter, Bridget A. Anders, Meredith E. Laborde, Dale J. Hedges, Anthony C. Otieno, Benjamin P. Perodeau, Justin D. Fowlkes
Publikováno v:
Journal of molecular biology. 342(1)
The Alu Ya-lineage is a group of related, short interspersed elements (SINEs) found in primates. This lineage includes subfamilies Ya1-Ya5, Ya5a2 and others. Some of these subfamilies are still actively mobilizing in the human genome. We have analyze
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::78a61ec731b8d71247a3511d19c07602
https://pubmed.ncbi.nlm.nih.gov/15313610
https://pubmed.ncbi.nlm.nih.gov/15313610
Autor:
Dale J. Hedges, Jerilyn A. Walker, Gail Kilroy, Mark A. Batzer, Randall K. Garber, Jinchuan Xing
Publikováno v:
Analytical biochemistry. 325(1)
Forensic casework samples routinely contain DNA from multiple contributors [1], posing a challenge to investigators attempting to resolve the components of complex DNA mixtures. Analysis of human mitochondrial DNA (mtDNA) is commonly used in forensic
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8b536cd9b65257ff2cbfd5256238a252
https://pubmed.ncbi.nlm.nih.gov/14715300
https://pubmed.ncbi.nlm.nih.gov/14715300
Autor:
W. Scott Watkins, Mark A. Batzer, Abdel Halim Salem, Pauline A. Callinan, Jerilyn A. Walker, Dale J. Hedges, Michael J. Bamshad, Randall K. Garber, Jinchuan Xing, Lynn B. Jorde
Publikováno v:
Gene. 317(1-2)
A comprehensive analysis of the human sex chromosomes was undertaken to assess Alu-associated human genomic diversity and to identify novel Alu insertion polymorphisms for the study of human evolution. Three hundred forty-five recently integrated Alu
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::743eba5d621a44a019e32c9f11608995
https://pubmed.ncbi.nlm.nih.gov/14604797
https://pubmed.ncbi.nlm.nih.gov/14604797
Autor:
Randall K. Garber, Astrid M. Roy-Engel, Marion L. Carroll, Son V. Nguyen, Mark A. Batzer, Prescott L. Deininger, Abdel Halim Salem, Mohamed El-Sawy
Publikováno v:
Journal of molecular biology. 316(5)
Alu elements belonging to the previously identified ‘‘young’’ subfamilies are thought to have inserted in the human genome after the divergence of humans from non-human primates and therefore should not be present in non-human primate genomes
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::408ef4a9215007858cff6a28235e5d2c
https://pubmed.ncbi.nlm.nih.gov/11884141
https://pubmed.ncbi.nlm.nih.gov/11884141
Publikováno v:
HortScience. 21:974-984
Mycorrhiza refers to a mutualistic, symbiotic relationship formed between fungi (Gr. mukes) and living roots (Gr. rhiza) of higher plants. These associations are prevalent among most plant species and have been observed in most vegetables except the
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::eccb4ad8fcf23237693a90cb7b5bb752
https://doi.org/10.21273/hortsci.21.4.974
https://doi.org/10.21273/hortsci.21.4.974