Tractography passes the test: Results from the diffusion-simulated connectivity (disco) challenge

Autor: Girard, Gabriel, Rafael-Patiño, Jonathan, Truffet, Raphaël, Aydogan, Dogu Baran, Adluru, Nagesh, Nair, Veena A., Prabhakaran, Vivek, Bendlin, Barbara B., Alexander, Andrew L., Bosticardo, Sara, Gabusi, Ilaria, Ocampo-Pineda, Mario, Battocchio, Matteo, Piskorova, Zuzana, Bontempi, Pietro, Schiavi, Simona, Daducci, Alessandro, Stafiej, Aleksandra, Ciupek, Dominika, Bogusz, Fabian, Pieciak, Tomasz, Frigo, Matteo, Sedlar, Sara, Deslauriers-Gauthier, Samuel, Kojčić, Ivana, Zucchelli, Mauro, Laghrissi, Hiba, Ji, Yang, Deriche, Rachid, Schilling, Kurt G, Landman, Bennett A., Cacciola, Alberto, Basile, Gianpaolo Antonio, Bertino, Salvatore, Newlin, Nancy, Kanakaraj, Praitayini, Rheault, Francois, Filipiak, Patryk, Shepherd, Timothy M., Lin, Ying-Chia, Placantonakis, Dimitris G., Boada, Fernando E., Baete, Steven H., Hernández-Gutiérrez, Erick, Ramírez-Manzanares, Alonso, Coronado-Leija, Ricardo, Stack-Sánchez, Pablo, Concha, Luis, Descoteaux, Maxime, Mansour L．, Sina, Seguin, Caio, Zalesky, Andrew, Marshall, Kenji, Canales-Rodríguez, Erick J., Wu, Ye, Ahmad, Sahar, Yap, Pew-Thian, Théberge, Antoine, Gagnon, Florence, Massi, Frédéric, Fischi-Gomez, Elda, Gardier, Rémy, Haro, Juan Luis Villarreal, Pizzolato, Marco, Caruyer, Emmanuel, Thiran, Jean-Philippe

Publikováno v: In NeuroImage 15 August 2023 277

A GPU implementation of the Discontinuous Galerkin method for simulation of diffusion in brain tissue

Autor: Cervantes, Daniel, Moreles, Miguel angel, Peña, Joaquin, Ramirez-Manzanares, Alonso

In this work we develop a methodology to approximate the covariance matrix associated to the simulation of water diffusion inside the brain tissue. The computation is based on an implementation of the Discontinuous Galerkin method of the diffusion eq

Externí odkaz: http://arxiv.org/abs/1907.06191

Multi-tensor diffusion abnormalities of gray matter in an animal model of cortical dysplasia

Autor: Paulina J. Villaseñor, David Cortés-Servín, Aylín Pérez-Moriel, Ana Aquiles, Hiram Luna-Munguía, Alonso Ramirez-Manzanares, Ricardo Coronado-Leija, Jorge Larriva-Sahd, Luis Concha

Publikováno v: Frontiers in Neurology, Vol 14 (2023)

Focal cortical dysplasias are a type of malformations of cortical development that are a common cause of drug-resistant focal epilepsy. Surgical treatment is a viable option for some of these patients, with their outcome being highly related to compl

Externí odkaz: https://doaj.org/article/413fafb9aa8a4250b50088b3c4f6b26e

Tractography dissection variability: What happens when 42 groups dissect 14 white matter bundles on the same dataset?

Autor: Schilling, Kurt G., Rheault, François, Petit, Laurent, Hansen, Colin B., Nath, Vishwesh, Yeh, Fang-Cheng, Girard, Gabriel, Barakovic, Muhamed, Rafael-Patino, Jonathan, Yu, Thomas, Fischi-Gomez, Elda, Pizzolato, Marco, Ocampo-Pineda, Mario, Schiavi, Simona, Canales-Rodríguez, Erick J., Daducci, Alessandro, Granziera, Cristina, Innocenti, Giorgio, Thiran, Jean-Philippe, Mancini, Laura, Wastling, Stephen, Cocozza, Sirio, Petracca, Maria, Pontillo, Giuseppe, Mancini, Matteo, Vos, Sjoerd B., Vakharia, Vejay N., Duncan, John S., Melero, Helena, Manzanedo, Lidia, Sanz-Morales, Emilio, Peña-Melián, Ángel, Calamante, Fernando, Attyé, Arnaud, Cabeen, Ryan P., Korobova, Laura, Toga, Arthur W., Vijayakumari, Anupa Ambili, Parker, Drew, Verma, Ragini, Radwan, Ahmed, Sunaert, Stefan, Emsell, Louise, De Luca, Alberto, Leemans, Alexander, Bajada, Claude J., Haroon, Hamied, Azadbakht, Hojjatollah, Chamberland, Maxime, Genc, Sila, Tax, Chantal M.W., Yeh, Ping-Hong, Srikanchana, Rujirutana, Mcknight, Colin D., Yang, Joseph Yuan-Mou, Chen, Jian, Kelly, Claire E., Yeh, Chun-Hung, Cochereau, Jerome, Maller, Jerome J., Welton, Thomas, Almairac, Fabien, Seunarine, Kiran K, Clark, Chris A., Zhang, Fan, Makris, Nikos, Golby, Alexandra, Rathi, Yogesh, O'Donnell, Lauren J., Xia, Yihao, Aydogan, Dogu Baran, Shi, Yonggang, Fernandes, Francisco Guerreiro, Raemaekers, Mathijs, Warrington, Shaun, Michielse, Stijn, Ramírez-Manzanares, Alonso, Concha, Luis, Aranda, Ramón, Meraz, Mariano Rivera, Lerma-Usabiaga, Garikoitz, Roitman, Lucas, Fekonja, Lucius S., Calarco, Navona, Joseph, Michael, Nakua, Hajer, Voineskos, Aristotle N., Karan, Philippe, Grenier, Gabrielle, Legarreta, Jon Haitz, Adluru, Nagesh, Nair, Veena A., Prabhakaran, Vivek, Alexander, Andrew L., Kamagata, Koji, Saito, Yuya, Uchida, Wataru, Andica, Christina, Abe, Masahiro, Bayrak, Roza G., Wheeler-Kingshott, Claudia A.M. Gandini, D'Angelo, Egidio, Palesi, Fulvia, Savini, Giovanni, Rolandi, Nicolò, Guevara, Pamela, Houenou, Josselin, López-López, Narciso, Mangin, Jean-François, Poupon, Cyril, Román, Claudio, Vázquez, Andrea, Maffei, Chiara, Arantes, Mavilde, Andrade, José Paulo, Silva, Susana Maria, Calhoun, Vince D., Caverzasi, Eduardo, Sacco, Simone, Lauricella, Michael, Pestilli, Franco, Bullock, Daniel, Zhan, Yang, Brignoni-Perez, Edith, Lebel, Catherine, Reynolds, Jess E, Nestrasil, Igor, Labounek, René, Lenglet, Christophe, Paulson, Amy, Aulicka, Stefania, Heilbronner, Sarah R., Heuer, Katja, Chandio, Bramsh Qamar, Guaje, Javier, Tang, Wei, Garyfallidis, Eleftherios, Raja, Rajikha, Anderson, Adam W., Landman, Bennett A., Descoteaux, Maxime

Publikováno v: In NeuroImage November 2021 243

A computational method for the covariance matrix associated with extracellular diffusivity on disordered models of cylindrical brain axons

Autor: Daniel Cervantes, Miguel angel Moreles, Joaquin Peña, Alonso Ramirez-Manzanares

Publikováno v: Mathematical Biosciences and Engineering, Vol 18, Iss 5, Pp 4961-4970 (2021)

This study developed a method to approximate the covariance matrix associated with the simulation of water molecular diffusion inside the brain tissue. The computation implements the Discontinuous Galerkin method of the diffusion equation. A physical

Externí odkaz: https://doaj.org/article/58e7dc922d6f4e95852a71180f5bde95