BAC-pool sequencing and analysis of large segments of A12 and D12 homoeologous chromosomes in upland cotton.

Autor: Ramesh Buyyarapu, Ramesh V Kantety, John Z Yu, Zhanyou Xu, Russell J Kohel, Richard G Percy, Simone Macmil, Graham B Wiley, Bruce A Roe, Govind C Sharma

Publikováno v: PLoS ONE, Vol 8, Iss 10, p e76757 (2013)

Although new and emerging next-generation sequencing (NGS) technologies have reduced sequencing costs significantly, much work remains to implement them for de novo sequencing of complex and highly repetitive genomes such as the tetraploid genome of

Externí odkaz: https://doaj.org/article/e08fbdbb8d0647bfb5a792dca545942f

Principal Component Analysis and Molecular Characterization of Reniform Nematode Populations in Alabama

Autor: Ernst Cebert, Govind C. Sharma, Kathy S. Lawrence, Joseph O. Honger, Seloame T. Nyaku, Ramesh V. Kantety

Publikováno v: The Plant Pathology Journal, Vol 32, Iss 2, Pp 123-135 (2016)
The Plant Pathology Journal

U.S. cotton production is suffering from the yield loss caused by the reniform nematode (RN), Rotylenchulus reniformis. Management of this devastating pest is of utmost importance because, no upland cotton cultivar exhibits adequate resistance to RN.

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::01ca5b5db1f4afb75967585a3d9f6c07
https://doi.org/10.5423/ppj.oa.09.2015.0194

Characterization of the reniform nematode genome by shotgun sequencing

Autor: Pheba L. George, Govind C. Sharma, Ramesh V. Kantety, Padmini Sripathi, Kathy S. Lawrence, Zachary N. Senwo, Ramesh Buyyarapu, Yong Q. Gu, Robert Mc Ewan, Seloame T. Nyaku, Venkateswara R. Sripathi, Sarah Beth Cseke

Publikováno v: Genome. 57:209-221

The reniform nematode (RN), a major agricultural pest particularly on cotton in the United States, is among the major plant-parasitic nematodes for which limited genomic information exists. In this study, over 380 Mb of sequence data were generated f

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e8e003a3281a5cd3258405a2913229df
https://doi.org/10.1139/gen-2014-0019

The Expressed Parasitism Genes in the Reniform Nematode (Rotylenchulus reniformis)

Autor: Govind C. Sharma, Fares Z. Najar, Sarah Beth Cseke, Seloame T. Nyaku, Leland J. Cseke, Ramesh V. Kantety, Bruce A. Roe, Graham B. Wiley, Venkateswara R. Sripathi, Elica M. Moss

Publikováno v: American Journal of Plant Sciences. :780-791

The reniform nematode (RN), Rotylenchulus reniformis, is an agriculturally important pest with a broad host range that results in a large economic impact in tropical, subtropical and in warm temperate zones. In an initial effort to understand the tra

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::6e437f3006bf6e015f86e0712fcdad68
https://doi.org/10.4236/ajps.2013.44097

A Chromosome Bin Map of 16,000 Expressed Sequence Tag Loci and Distribution of Genes Among the Three Genomes of Polyploid Wheat

Autor: Shawn F. Sorrells, R. A. Greene, Miftahudin, Ramesh V. Kantety, Jose L. Gonzalez-Hernandez, G. E. Butler, Patrick E. McGuire, J. P. Gustafson, Xue-Feng Ma, A. M. Linkiewicz, Shahryar F. Kianian, Anura W. G. Ratnasiri, Jesse David Munkvold, Mark E. Sorrells, Lili Qi, J. Dvořák, Junhua Peng, Bikram S. Gill, Raymond D. Fenton, Devinder Sandhu, A. A. Mahmoud, Mustafa Erayman, C. E. Bermudez-Kandianis, Olin D. Anderson, Vivienne Nduati, M. S. Pathan, Gerard R. Lazo, S. N. Bondareva, Henry T. Nguyen, D. W. Choi, C. M. La Rota, E. Conley, Jorge Dubcovsky, Calvin O. Qualset, Venu Kalavacharla, Shiaoman Chao, Kulvinder S. Gill, Daowen Zhang, Muharrem Dilbirligi, James A. Anderson, Harpinder Randhawa, Eduard Akhunov, Khwaja Hossain, B. Echalier, Timothy J. Close, Nora L. V. Lapitan, Deepak Sidhu

Publikováno v: Qi, LL; Echalier, B; Chao, S; Lazo, GR; Butler, GE; Anderson, OD; et al.(2004). A chromosome bin map of 16,000 expressed sequence tag loci and distribution of genes among the three genomes of polyploid wheat. Genetics, 168(2), 701-712. doi: 10.1534/genetics.104.034868. UC Davis: Retrieved from: http://www.escholarship.org/uc/item/02k6k0fb
Genetics, vol 168, iss 2

Because of the huge size of the common wheat (Triticum aestivum L., 2n = 6x = 42, AABBDD) genome of 17,300 Mb, sequencing and mapping of the expressed portion is a logical first step for gene discovery. Here we report mapping of 7104 expressed sequen

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e7f76fc9c4f52860ea0bd259f5ded042
https://doi.org/10.1534/genetics.104.034868