Zobrazeno 1 - 10
of 19
pro vyhledávání: '"Ramachandran Boopathi"'
Autor:
Sreedhar Chinnaswamy, Snehajyoti Chatterjee, Ramachandran Boopathi, Shuvolina Mukherjee, Samsiddhi Bhattacharjee, Tapas K Kundu
Publikováno v:
PLoS ONE, Vol 8, Iss 10, p e75495 (2013)
Persistence of hepatitis C virus (HCV) infection is observed only in a subset of infected individuals and among them only some respond to treatment. Genome-wide association studies (GWAS) carried out around the world identified single nucleotide poly
Externí odkaz:
https://doaj.org/article/783d9bfb1d32413d828ce6ad7fbf32c7
Capturing Protein–Nucleic Acid Interactions by High‐Intensity Laser‐Induced Covalent Cross‐Linking †
Autor:
Dimitar Angelov, Ramachandran Boopathi, Imtiaz Nisar Lone, Hervé Menoni, Stefan Dimitrov, Jean Cadet
Publikováno v:
Photochemistry and Photobiology. 99:296-312
Interactions of DNA with structural proteins such as histones, regulatory proteins and enzymes play a crucial role in major cellular processes such as transcription, replication and repair. The in vivo mapping and characterization of the binding site
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::990ce57f62ecbef7410ef885c0420902
https://doi.org/10.1111/php.13699
https://doi.org/10.1111/php.13699
Autor:
Jaime Alegrio Louro, Ramachandran Boopathi, Brice Beinsteiner, Abdul Kareem Mohideen Patel, Tat Cheung Cheng, Dimitar Angelov, Ali Hamiche, Jan Bendar, Seyit Kale, Bruno P. Klaholz, Stefan Dimitrov
Publikováno v:
Structure. 31:201-212.e5
© 2023 Elsevier LtdNucleosomes are symmetric structures. However, binding of linker histones generates an inherently asymmetric H1-nucleosome complex, and whether this asymmetry is transmitted to the overall nucleosome structure, and therefore also
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::22e4dafdae02c17f087e68d51def6909
https://doi.org/10.1016/j.str.2022.12.005
https://doi.org/10.1016/j.str.2022.12.005
Autor:
Burcu Ozden, Ramachandran Boopathi, Ayşe Berçin Barlas, Imtiaz N. Lone, Jan Bednar, Carlo Petosa, Seyit Kale, Ali Hamiche, Dimitar Angelov, Stefan Dimitrov, Ezgi Karaca
Pioneer transcription factors (PTFs) have the remarkable ability to directly bind to chromatin for stimulating vital cellular processes. In this work, we dissect the universal binding mode of Sox PTF by combining extensive molecular simulations and D
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::584725f00156adc62c6cb3f1ce16d2b9
https://doi.org/10.1101/2021.12.07.471700
https://doi.org/10.1101/2021.12.07.471700
Autor:
Vinay J. Rao, Ramachandran Boopathi, Dhanasekan Karthigeyan, Hiroki Shima, Tapas K. Kundu, Arun Kumar Trivedi, Reshma Taneja, Narendra Bharathy, Kazuhiko Igarashi, Arnab Bose
Publikováno v:
The Journal of Biochemistry. 167:195-201
Aurora kinases are Ser/Thr-directed protein kinases which play pivotal roles in mitosis. Recent evidences highlight the importance of these kinases in multiple biological events including skeletal muscle differentiation. Our earlier study identified
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::85542c62f0a65033ae859f43440310a1
https://doi.org/10.1093/jb/mvz088
https://doi.org/10.1093/jb/mvz088
Publikováno v:
Current Opinion in Structural Biology
Current Opinion in Structural Biology, Elsevier, 2020, 64, pp.97-103. ⟨10.1016/j.sbi.2020.06.016⟩
Current Opinion in Structural Biology, 2020, 64, pp.97-103. ⟨10.1016/j.sbi.2020.06.016⟩
Current Opinion in Structural Biology, Elsevier, 2020, 64, pp.97-103. ⟨10.1016/j.sbi.2020.06.016⟩
Current Opinion in Structural Biology, 2020, 64, pp.97-103. ⟨10.1016/j.sbi.2020.06.016⟩
International audience; The three-dimensional (3D) organization of chromatin plays a crucial role in the regulation of gene expression. Chromatin conformation is strongly affected by the composition, structural features and dynamic properties of the
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fce36ada493ee1ab26fd9f856b4b513d
https://hal.archives-ouvertes.fr/hal-03484307
https://hal.archives-ouvertes.fr/hal-03484307
Autor:
Dimitar Angelov, Seyit Kale, Sunil Nahata, Stefan Dimitrov, Lorrie Ramos, Ali Hamiche, Maryam Khoshouei, Jan Bednar, Carlo Petosa, Radostin Danev, Ramachandran Boopathi
Publikováno v:
Nucleic Acids Research
Nucleic Acids Research, Oxford University Press, 2020, 48 (10), pp.5735-5748. ⟨10.1093/nar/gkaa246⟩
Nucleic Acids Research (London)
Nucleic Acids Research, 2020, 48 (10), pp.5735-5748. ⟨10.1093/nar/gkaa246⟩
Nucleic Acids Research, Oxford University Press, 2020, 48 (10), pp.5735-5748. ⟨10.1093/nar/gkaa246⟩
Nucleic Acids Research (London)
Nucleic Acids Research, 2020, 48 (10), pp.5735-5748. ⟨10.1093/nar/gkaa246⟩
The histone H3 variant CENP-A marks centromeres epigenetically and is essential for mitotic fidelity. Previous crystallographic studies of the CENP-A nucleosome core particle (NCP) reconstituted with a human α-satellite DNA derivative revealed both
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d7286b67a827a8e6dd716a3bd7d0f250
https://hal.archives-ouvertes.fr/hal-03102278/document
https://hal.archives-ouvertes.fr/hal-03102278/document
Autor:
Stefan Dimitrov, Elsa Ben Simon, Defne Dalkara, Dimitar Angelov, Ramachandran Boopathi, Lorrie Ramos, Sajad Hussain Syed, Ali Hamiche, Sunil Nahata, Jan Bednar, Cendrine Moskalenko, Andrew Travers, Manu Shukla
Publikováno v:
Scientific Reports
Scientific Reports, Nature Publishing Group, 2019, 9 (1), pp.14212. ⟨10.1038/s41598-019-50572-8⟩
Shukla, M S, Syed, S H, Boopathi, R, Simon, E B, Nahata, S, Ramos, L, Dalkara, D, Moskalenko, C, Travers, A, Angelov, D, Dimitrov, S, Hamiche, A & Bednar, J 2019, ' Generation of remosomes by the SWI/SNF chromatin remodeler family ', Scientific Reports, vol. 9, no. 1, 14212 . https://doi.org/10.1038/s41598-019-50572-8
Scientific Reports, Vol 9, Iss 1, Pp 1-13 (2019)
Scientific Reports, 2019, 9 (1), pp.14212. ⟨10.1038/s41598-019-50572-8⟩
Scientific Reports, Nature Publishing Group, 2019, 9 (1), pp.14212. ⟨10.1038/s41598-019-50572-8⟩
Shukla, M S, Syed, S H, Boopathi, R, Simon, E B, Nahata, S, Ramos, L, Dalkara, D, Moskalenko, C, Travers, A, Angelov, D, Dimitrov, S, Hamiche, A & Bednar, J 2019, ' Generation of remosomes by the SWI/SNF chromatin remodeler family ', Scientific Reports, vol. 9, no. 1, 14212 . https://doi.org/10.1038/s41598-019-50572-8
Scientific Reports, Vol 9, Iss 1, Pp 1-13 (2019)
Scientific Reports, 2019, 9 (1), pp.14212. ⟨10.1038/s41598-019-50572-8⟩
Chromatin remodelers are complexes able to both alter histone-DNA interactions and to mobilize nucleosomes. The mechanism of their action and the conformation of remodeled nucleosomes remain a matter of debates. In this work we compared the type and
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7669a8dc94e2dbb94033d1661136b1ff
https://doi.org/10.1038/s41598-019-50572-8
https://doi.org/10.1038/s41598-019-50572-8
Autor:
Tapas K. Kundu, Dhanasekaran Karthigeyan, Reshma Taneja, Narendra Bharathy, Kazuhiko Igarashi, Arnab Bose, Vinay J. Rao, Ramachandran Boopathi, Hiroki Shima
Aurora kinases are Ser/Thr-directed protein kinases which play pivotal roles in mitosis. Recent evidences highlight the importance of these kinases in non-mitotic biological events like skeletal myogenesis. Our earlier study identified POU6F1 (or mPO
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::76eda6ff0537ca8cb0c4e58fe10d7cf6
TFIIIC is a multisubunit complex that recognizes promoter elements and recruits TFIIIB and RNA polymerase III. Human TFIIIC complex possess lysine acetyltransferase activity which is critical in relieving chromatin mediated repression for RNA polymer
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::99d77279bb0f1c97670f3db29891a1ed
https://doi.org/10.1101/513127
https://doi.org/10.1101/513127