Zobrazeno 1 - 6
of 6
pro vyhledávání: '"Ralph Pethica"'
Publikováno v:
PLoS ONE, Vol 5, Iss 1, p e8934 (2010)
Phylogenetic trees are complex data forms that need to be graphically displayed to be human-readable. Traditional techniques of plotting phylogenetic trees focus on rendering a single static image, but increases in the production of biological data a
Externí odkaz:
https://doaj.org/article/bc6d75a5226546d3b93c8b0158a4aff6
Autor:
Cyrus Chothia, Derek Wilson, David A. de Lima Morais, Owen J. L. Rackham, Hai Fang, Ralph Pethica, Julian Gough
Publikováno v:
Nucleic Acids Research
The SUPERFAMILY resource provides protein domain assignments at the structural classification of protein (SCOP) superfamily level for over 1400 completely sequenced genomes, over 120 metagenomes and other gene collections such as UniProt. All models
Autor:
Christine Vogel, Martin Madera, Charles Talbot, Julian Gough, Yiduo Zhou, Cyrus Chothia, Derek Wilson, Ralph Pethica
Publikováno v:
Nucleic Acids Research
SUPERFAMILY provides structural, functional and evolutionary information for proteins from all completely sequenced genomes, and large sequence collections such as UniProt. Protein domain assignments for over 900 genomes are included in the database,
Autor:
Ralph Pethica, Matt E. Oates, Philip C. J. Donoghue, Alexandros Stamatakis, David A. de Lima Morais, Julian Gough, Owen J. L. Rackham, Jenny M. Greenwood, Hai Fang, Adam Sardar
Publikováno v:
Scientific reports, 3, Art. Nr.: 2015
Scientific Reports
Scientific Reports
We report a daily-updated sequenced/species Tree Of Life (sTOL) as a reference for the increasing number of cellular organisms with their genomes sequenced. The sTOL builds on a likelihood-based weight calibration algorithm to consolidate NCBI taxono
Publikováno v:
BMC Structural Biology, Vol 12, Iss 1, p 27 (2012)
BMC Structural Biology
BMC Structural Biology
Background SCOP is a hierarchical domain classification system for proteins of known structure. The superfamily level has a clear definition: Protein domains belong to the same superfamily if there is structural, functional and sequence evidence for
Publikováno v:
PLoS ONE
PLoS ONE, Vol 5, Iss 1, p e8934 (2010)
PLoS ONE, Vol 5, Iss 1, p e8934 (2010)
Background Phylogenetic trees are complex data forms that need to be graphically displayed to be human-readable. Traditional techniques of plotting phylogenetic trees focus on rendering a single static image, but increases in the production of biolog