Development of a large SNP genotyping array and generation of high-density genetic maps in tomato.

Autor: Sung-Chur Sim, Gregor Durstewitz, Jörg Plieske, Ralf Wieseke, Martin W Ganal, Allen Van Deynze, John P Hamilton, C Robin Buell, Mathilde Causse, Saranga Wijeratne, David M Francis

Publikováno v: PLoS ONE, Vol 7, Iss 7, p e40563 (2012)

The concurrent development of high-throughput genotyping platforms and next generation sequencing (NGS) has increased the number and density of genetic markers, the efficiency of constructing detailed linkage maps, and our ability to overlay recombin

Externí odkaz: https://doaj.org/article/0bd978bdf82a40ae8b464a0b05a7bca2

Characterization of polyploid wheat genomic diversity using a high‐density 90 000 single nucleotide polymorphism array

Autor: Debbie Wong, Abraham B. Korol, Eduard Akhunov, Catherine Feuillet, Gina Brown-Guedira, Ivan Mikoulitch, Jan Dvorak, Martin W. Ganal, Marco Maccaferri, Curtis J. Pozniak, Luigi Cattivelli, Joerg Plieske, Rudi Appels, Rudy Dolferus, Anna M. Mastrangelo, Ming-Cheng Luo, Bevan Emma Huang, Alexandra M. Allen, Jorge Dubcovsky, Matthew K. Morell, Michele Morgante, Cindy Lawley, Shichen Wang, Morten Lillemo, Sara Giulia Milner, Shiaoman Chao, Alex Whan, Alina Akhunova, Kerrie Forrest, Matthew J. Hayden, Gary L A Barker, Keith J. Edwards, Jérôme Salse, Stuart Stephen, Roberto Tuberosa, Colin Cavanagh, Silvio Salvi, Ralf Wieseke, Diane E. Mather

Publikováno v: Plant Biotechnology Journal, vol 12, iss 6
Wang, S; Wong, D; Forrest, K; Allen, A; Chao, S; Huang, BE; et al.(2014). Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array. Plant Biotechnology Journal. doi: 10.1111/pbi.12183. UC Davis: Retrieved from: http://www.escholarship.org/uc/item/3rv2p5j3
Plant Biotechnology Journal
Plant Biotechnology Journal, Wiley, 2014, 12 (6), pp.787-796. ⟨10.1111/pbi.12183⟩
Wang, S; Wong, D; Forrest, K; Allen, A; Chao, S; Huang, BE; et al.(2014). Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array. Plant Biotechnology Journal, 12(6), 787-796. doi: 10.1111/pbi.12183. UC Davis: Retrieved from: http://www.escholarship.org/uc/item/23b137fg
Plant Biotechnology Journal, 2014, 12 (6), pp.787-796. ⟨10.1111/pbi.12183⟩

High-density single nucleotide polymorphism (SNP) genotyping arrays are a powerful tool for studying genomic patterns of diversity, inferring ancestral relationships between individuals in populations and studying marker-trait associations in mapping

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9f71b9a9a6976cc20cfe91409c4e0c22
https://doi.org/10.1111/pbi.12183

Diversity analysis and genomic prediction of Sclerotinia resistance in sunflower using a new 25 K SNP genotyping array

Autor: Martin Mascher, Andreas Polley, Maren Livaja, Christina Lehermeier, Sandra Unterseer, Silke Wieckhorst, Jörg Plieske, Milena Ouzunova, Martin W. Ganal, Ralf Wieseke, Chris-Carolin Schön, Wiltrud Erath, Volker Hahn, Hartmut Luerßen

Publikováno v: TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 129(2)

We have developed a SNP array for sunflower containing more than 25 K markers, representing single loci mostly in or near transcribed regions of the genome. The array was successfully applied to genotype a diversity panel of lines, hybrids, and mappi

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ce70d30600c684d40fadb271c96f74ea
https://pubmed.ncbi.nlm.nih.gov/26536890

Large SNP arrays for genotyping in crop plants

Autor: Ralf Wieseke, Joerg Plieske, Andreas Polley, Eva-Maria Graner, Gregor Durstewitz, Martin W. Ganal, Hartmut Luerssen

Publikováno v: Journal of biosciences. 37(5)

Genotyping with large numbers of molecular markers is now an indispensable tool within plant genetics and breeding. Especially through the identification of large numbers of single nucleotide polymorphism (SNP) markers using the novel high-throughput

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7022ce3139d891b41801cd2d8253038b
https://pubmed.ncbi.nlm.nih.gov/23107918