Zobrazeno 1 - 10
of 17
pro vyhledávání: '"Rafail Nikolaos Tasakis"'
Autor:
Riccardo Pecori, Weicheng Ren, Mohammad Pirmoradian, Xianhuo Wang, Dongbing Liu, Mattias Berglund, Wei Li, Rafail Nikolaos Tasakis, Salvatore Di Giorgio, Xiaofei Ye, Xiaobo Li, Annette Arnold, Sandra Wüst, Martin Schneider, Karthika-Devi Selvasaravanan, Yvonne Fuell, Thorsten Stafforst, Rose-Marie Amini, Kristina Sonnevi, Gunilla Enblad, Birgitta Sander, Björn Engelbrekt Wahlin, Kui Wu, Huilai Zhang, Dominic Helm, Marco Binder, F. Nina Papavasiliou, Qiang Pan-Hammarström
Publikováno v:
iScience, Vol 26, Iss 6, Pp 106864- (2023)
Summary: Diffuse large B cell lymphoma (DLBCL) is one of the most common types of aggressive lymphoid malignancies. Here, we explore the contribution of RNA editing to DLBCL pathogenesis. We observed that DNA mutations and RNA editing events are ofte
Externí odkaz:
https://doaj.org/article/06e7c6d062c04ab1819616c3c1a37e1a
Autor:
Mitchell G. Kluesner, Rafail Nikolaos Tasakis, Taga Lerner, Annette Arnold, Sandra Wüst, Marco Binder, Beau R. Webber, Branden S. Moriarity, Riccardo Pecori
Publikováno v:
Molecular Therapy: Nucleic Acids, Vol 25, Iss , Pp 515-523 (2021)
We present MultiEditR (Multiple Edit Deconvolution by Inference of Traces in R), the first algorithm specifically designed to detect and quantify RNA editing from Sanger sequencing (z.umn.edu/multieditr). Although RNA editing is routinely evaluated b
Externí odkaz:
https://doaj.org/article/6ae1106ace65443689c12fb1b0a3e6cd
Autor:
Rafail Nikolaos Tasakis, Georgios Samaras, Anna Jamison, Michelle Lee, Alexandra Paulus, Gabrielle Whitehouse, Laurent Verkoczy, F Nina Papavasiliou, Marilyn Diaz
Publikováno v:
PLoS ONE, Vol 16, Iss 7, p e0255169 (2021)
Since the first case of COVID-19 in December 2019 in Wuhan, China, SARS-CoV-2 has spread worldwide and within a year and a half has caused 3.56 million deaths globally. With dramatically increasing infection numbers, and the arrival of new variants w
Externí odkaz:
https://doaj.org/article/20d9691c69244f98842dd8b3ab74a933
Autor:
Marco Binder, Sandra Wüst, Riccardo Pecori, Mitchell G. Kluesner, Taga Lerner, Annette Arnold, Branden S. Moriarity, Beau R. Webber, Rafail Nikolaos Tasakis
Publikováno v:
Molecular Therapy: Nucleic Acids, Vol 25, Iss, Pp 515-523 (2021)
Molecular Therapy. Nucleic Acids
Molecular Therapy. Nucleic Acids
We present MultiEditR (Multiple Edit Deconvolution by Inference of Traces in R), the first algorithm specifically designed to detect and quantify RNA editing from Sanger sequencing (z.umn.edu/multieditr). Although RNA editing is routinely evaluated b
Publikováno v:
Epitranscriptomics ISBN: 9783030716110
Adenosine-to-inosine (A-to-I) RNA editing mediated by the ADAR (adenosine deaminase acting on RNA) protein family is the primary type of epitranscriptomic modification known to occur in mammal cells. Recently, several technologies have been developed
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::a4b21396ef81deb5b158b6f7a2d68182
https://doi.org/10.1007/978-3-030-71612-7_18
https://doi.org/10.1007/978-3-030-71612-7_18
Autor:
Varvara Zoumpourtikoudi, Rafail Nikolaos Tasakis, Hara Tsitsopoulou, Maria Touraki, Angeliki Karagiota
Publikováno v:
Probiotics and antimicrobial proteins. 13(2)
Five antibacterial peptides produced by Bacillus subtilis NCIB 3610 were purified, quantified, characterized, and identified in the present study. Cell-free extracts were subjected to three purification protocols employing ammonium sulfate or organic
Autor:
Taga, Lerner, Mitchell, Kluesner, Rafail Nikolaos, Tasakis, Branden S, Moriarity, F Nina, Papavasiliou, Riccardo, Pecori
Publikováno v:
Methods in molecular biology (Clifton, N.J.). 2181
The AID/APOBEC family of enzymes are cytidine deaminases that act upon DNA and RNA. Among APOBECs, the best characterized family member to act on RNA is the enzyme APOBEC1. APOBEC1-mediated RNA editing plays a key role in lipid metabolism and in main
Autor:
Mitchell G. Kluesner, Rafail Nikolaos Tasakis, Branden S. Moriarity, Riccardo Pecori, F. Nina Papavasiliou, Taga Lerner
Publikováno v:
Methods in Molecular Biology ISBN: 9781071607862
The AID/APOBEC family of enzymes are cytidine deaminases that act upon DNA and RNA. Among APOBECs, the best characterized family member to act on RNA is the enzyme APOBEC1. APOBEC1-mediated RNA editing plays a key role in lipid metabolism and in main
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::08ce9d8c94f312fb45772fff1c868317
https://doi.org/10.1007/978-1-0716-0787-9_4
https://doi.org/10.1007/978-1-0716-0787-9_4
Autor:
Rafail Nikolaos Tasakis, Samir Parekh, Alessandro Laganà, Violetta V. Leshchenko, Riccardo Pecori, Dimitra Stamkopoulou, Pavithra Nedumaran, F. Nina Papavasiliou, David Melnekoff
RNA editing is an epitranscriptomic modification of emerging relevance to disease development and manifestations. ADAR1, which resides on human chromosome 1q21, is an RNA editor whose over-expression, either by interferon (IFN) induction or through g
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bf9ba8d4d5eee51033db191eac34619d
https://doi.org/10.1101/2020.02.11.943845
https://doi.org/10.1101/2020.02.11.943845
Autor:
Maria Touraki, Rafail Nikolaos Tasakis
Publikováno v:
Analytical and Bioanalytical Chemistry. 410:1299-1310
A novel, generally applicable method of identifying peptides using HPLC, microwave-assisted acid hydrolysis (MAAH), and bioinformatics is described. Method validation was performed on bacteriocins-antibacterial peptides produced by probiotic bacteria