Zobrazeno 1 - 10
of 19
pro vyhledávání: '"Radoslaw Pluta"'
Publikováno v:
Frontiers in Molecular Biosciences, Vol 10 (2023)
When Enterococcus faecalis is exposed to changing environmental conditions, the expression of many genes is regulated at the transcriptional level. We reported previously that the enterococcal MafR protein causes genome-wide changes in the transcript
Externí odkaz:
https://doaj.org/article/445c91ff632f49b18d06a2228247d156
Autor:
Radoslaw Pluta, Eric Aragón, Nicholas A. Prescott, Lidia Ruiz, Rebeca A. Mees, Blazej Baginski, Julia R. Flood, Pau Martin-Malpartida, Joan Massagué, Yael David, Maria J. Macias
Publikováno v:
Nature Communications, Vol 13, Iss 1, Pp 1-15 (2022)
FoxH1 is an essential maternal pioneer factor during embryonic development. Here, the authors present several FoxH1—DNA structures that reveal the molecular basis for FoxH1 binding specificity and pioneer factor activity.
Externí odkaz:
https://doaj.org/article/9fd61b87a30a40ffac469fc74e5422b4
Autor:
Regina Freier, Eric Aragón, Błażej Bagiński, Radoslaw Pluta, Pau Martin-Malpartida, Lidia Ruiz, Miriam Condeminas, Cayetano Gonzalez, Maria J. Macias
Publikováno v:
IUCrJ, Vol 8, Iss 2, Pp 281-294 (2021)
Thioredoxins (Trxs) are ubiquitous enzymes that regulate the redox state in cells. In Drosophila, there are two germline-specific Trxs, Deadhead (Dhd) and thioredoxin T (TrxT), that belong to the lethal(3)malignant brain tumor signature genes and to
Externí odkaz:
https://doaj.org/article/af238065ce634e0696fc25d54648569c
Autor:
Lidia Ruiz, Zuzanna Kaczmarska, Tiago Gomes, Eric Aragon, Carles Torner, Regina Freier, Blazej Baginski, Pau Martin-Malpartida, Natàlia de Martin Garrido, José. A. Marquez, Tiago N. Cordeiro, Radoslaw Pluta, Maria J. Macias
Publikováno v:
Computational and Structural Biotechnology Journal, Vol 19, Iss , Pp 632-646 (2021)
Smad transcription factors are the main downstream effectors of the Transforming growth factor β superfamily (TGFβ) signalling network. The DNA complexes determined here by X-ray crystallography for the Bone Morphogenetic Proteins (BMP) activated S
Externí odkaz:
https://doaj.org/article/10ae5e5507dd41e3bcbef079abb5af1f
Autor:
Virtu Solano-Collado, Sofía Ruiz-Cruz, Fabián Lorenzo-Díaz, Radoslaw Pluta, Manuel Espinosa, Alicia Bravo
Publikováno v:
Frontiers in Molecular Biosciences, Vol 8 (2021)
Promoter recognition by RNA polymerase is a key step in the regulation of gene expression. The bacterial RNA polymerase core enzyme is a complex of five subunits that interacts transitory with one of a set of sigma factors forming the RNA polymerase
Externí odkaz:
https://doaj.org/article/d8c177696da64010875eeb9e54926fca
Autor:
Radoslaw Pluta, Regina Freier, Lidia Ruiz, Natàlia de Martin Garrido, José A. Márquez, Maria J. Macias, Eric Aragón, Tiago Gomes, Tiago N. Cordeiro, Pau Martin-Malpartida, Carles Torner, Zuzanna Kaczmarska, Błażej Bagiński
Publikováno v:
Computational and Structural Biotechnology Journal, Vol 19, Iss, Pp 632-646 (2021)
'Computational and Structural Biotechnology Journal ', vol: 19, pages: 632-646 (2021)
Computational And Structural Biotechnology Journal
Computational and Structural Biotechnology Journal
bioRxiv
'Computational and Structural Biotechnology Journal ', vol: 19, pages: 632-646 (2021)
Computational And Structural Biotechnology Journal
Computational and Structural Biotechnology Journal
bioRxiv
Graphical abstract Using structural biology approaches, we have elucidated some of the rules that help define the formation of MH1 domain dimers of BMP activated Smad proteins. We also propose a new hypothesis on how dimers and monomers can influence
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d5398f7806ad9cf12f586e141808a317
http://www.sciencedirect.com/science/article/pii/S2001037021000027
http://www.sciencedirect.com/science/article/pii/S2001037021000027
Autor:
M. Pilar Garcillán-Barcia, Radoslaw Pluta, Fabián Lorenzo-Díaz, Alicia Bravo, Manuel Espinosa
Publikováno v:
Microbiol Mol Biol Rev
Digital.CSIC. Repositorio Institucional del CSIC
instname
Digital.CSIC. Repositorio Institucional del CSIC
instname
90 p.-15 fig.-5 tab.
Plasmids are self-replicative DNA elements that are transferred between bacteria. Plasmids encode not only antibiotic resistance genes but also adaptive genes that allow their hosts to colonize new niches. Plasmid transfer i
Plasmids are self-replicative DNA elements that are transferred between bacteria. Plasmids encode not only antibiotic resistance genes but also adaptive genes that allow their hosts to colonize new niches. Plasmid transfer i
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1e965f2ddc8ccb94dd27564032ffae95
http://hdl.handle.net/10261/268109
http://hdl.handle.net/10261/268109
Autor:
Regina, Freier, Eric, Aragón, Błażej, Bagiński, Radoslaw, Pluta, Pau, Martin-Malpartida, Lidia, Ruiz, Miriam, Condeminas, Cayetano, Gonzalez, Maria J, Macias
Publikováno v:
IUCrJ
The first structures of the Drosophila germline-specific thioredoxins Deadhead (Dhd) and thioredoxin T (TrxT), which present unusual properties with respect to canonical Trxs, are reported. Dhd is highly positively charged, which facilitates nonspeci
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::3ad14c2b0bd909d2a1b50f00d1aad85c
https://pubmed.ncbi.nlm.nih.gov/33708404
https://pubmed.ncbi.nlm.nih.gov/33708404
Autor:
Lidia Ruiz, Maria J. Macias, Regina Freier, Pau Martin-Malpartida, Błażej Bagiński, Cayetano Gonzalez, Radoslaw Pluta, Miriam Condeminas, Eric Aragón
Publikováno v:
IUCrJ, Vol 8, Iss 2, Pp 281-294 (2021)
'IUCrJ ', vol: 8, pages: 281-294 (2021)
'IUCrJ ', vol: 8, pages: 281-294 (2021)
Thioredoxins (Trxs) are ubiquitous enzymes that regulate the redox state in cells. In Drosophila, there are two germline-specific Trxs, Deadhead (Dhd) and TrxT. Both proteins belong to the L(3)mbt malignant brain tumor signature and to the MMS surviv
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f5adf129018e436d108a82054abb0423
https://doi.org/10.1101/2020.07.29.226944
https://doi.org/10.1101/2020.07.29.226944
Autor:
Joanna Sarzynska, David M.J. Lilley, Yi Xiao, Peinan Zhao, Michal J. Boniecki, Dinshaw J. Patel, Astha Joshi, Yuanzhe Zhou, Radoslaw Pluta, Clarence Yu Cheng, Lin Huang, Fang-Chieh Chou, Zhichao Miao, François Major, Li-Zhen Sun, Chenhan Zhao, Marcin Magnus, Andrey Krokhotin, Rhiju Das, Zhenzhen Zhang, Joseph D. Yesselman, Jakub Wiedemann, Yijin Liu, Olivier Mailhot, Xiaojun Xu, Andrew M. Watkins, Robert T. Batey, Yangwei Jiang, Caleb Geniesse, Maciej Antczak, Adriana Żyła, Siqi Tian, Aiming Ren, Nikolay V. Dokholyan, Thomas H. Mann, Tomasz Zok, Janusz M. Bujnicki, Shi-Jie Chen, Ryszard W. Adamiak, Eric Westhof, Barbara L. Golden, Jian Wang, Feng Ding, Marta Szachniuk, Mariusz Popenda, Paweł Piątkowski, Dong Zhang, Yi Cheng, Yi Zhang, Jun Wang
Publikováno v:
RNA
RNA, Cold Spring Harbor Laboratory Press, 2020, 26 (8), pp.982-995. ⟨10.1261/rna.075341.120⟩
RNA, Cold Spring Harbor Laboratory Press, 2020, 26 (8), pp.982-995. ⟨10.1261/rna.075341.120⟩
International audience; RNA-Puzzles is a collective endeavor dedicated to the advancement and improvement of RNA 3D structure prediction. With agreement from crystallographers, the RNA structures are predicted by various groups before the publication
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ce737604dde88ce4f4cd65a4a5aab7cf
https://hal.archives-ouvertes.fr/hal-02966062
https://hal.archives-ouvertes.fr/hal-02966062