Zobrazeno 1 - 10
of 96
pro vyhledávání: '"Radoje Drmanac"'
Autor:
Jordan Patterson, Eric J. Carpenter, Zhenzhen Zhu, Dan An, Xinming Liang, Chunyu Geng, Radoje Drmanac, Gane Ka-Shu Wong
Publikováno v:
BMC Genomics, Vol 20, Iss 1, Pp 1-14 (2019)
Abstract Background RNA-Seq data is inherently nonuniform for different transcripts because of differences in gene expression. This makes it challenging to decide how much data should be generated from each sample. How much should one spend to recove
Externí odkaz:
https://doaj.org/article/0292fe3e752b482cafadc4f537ea9fe7
Autor:
Qiaoling Li, Xia Zhao, Wenwei Zhang, Lin Wang, Jingjing Wang, Dongyang Xu, Zhiying Mei, Qiang Liu, Shiyi Du, Zhanqing Li, Xinming Liang, Xiaman Wang, Hanmin Wei, Pengjuan Liu, Jing Zou, Hanjie Shen, Ao Chen, Snezana Drmanac, Jia Sophie Liu, Li Li, Hui Jiang, Yongwei Zhang, Jian Wang, Huanming Yang, Xun Xu, Radoje Drmanac, Yuan Jiang
Publikováno v:
BMC Genomics, Vol 20, Iss 1, Pp 1-13 (2019)
Abstract Background Massively-parallel-sequencing, coupled with sample multiplexing, has made genetic tests broadly affordable. However, intractable index mis-assignments (commonly exceeds 1%) were repeatedly reported on some widely used sequencing p
Externí odkaz:
https://doaj.org/article/ba25649b43b0432f9d5ef385f1cdca14
Autor:
Weixue Mu, Jinpu Wei, Ting Yang, Yannan Fan, Le Cheng, Jinlong Yang, Ranchang Mu, Jie Liu, Jianming Zhao, Weibang Sun, Xun Xu, Xin Liu, Radoje Drmanac, Huan Liu
Publikováno v:
GigaByte (2020)
Nyssa yunnanensis is a deciduous tree species in the family Nyssaceae within the order Cornales. As only eight individual trees and two populations have been recorded in China’s Yunnan province, this species has been listed among China’s national
Externí odkaz:
https://doaj.org/article/9d5da7c7053142b7b2c1705d1d60820e
Autor:
Jiancong Weng, Tian Chen, Yinlong Xie, Xun Xu, Gengyun Zhang, Brock A. Peters, Radoje Drmanac
Publikováno v:
PeerJ, Vol 8, p e8431 (2020)
Recent advances in long fragment read (LFR, also known as linked-read technologies or read-cloud) technologies, such as single tube long fragment reads (stLFR), 10X Genomics Chromium reads, and TruSeq synthetic long-reads, have enabled efficient hapl
Externí odkaz:
https://doaj.org/article/f913012e8ac54940ab616d0be17149df
Autor:
Konstantinos Mitropoulos, Eleni Merkouri Papadima, Georgia Xiromerisiou, Angeliki Balasopoulou, Kyriaki Charalampidou, Vasiliki Galani, Krystallia-Vassiliki Zafeiri, Efthymios Dardiotis, Styliani Ralli, Georgia Deretzi, Anne John, Kyriaki Kydonopoulou, Elpida Papadopoulou, Alba di Pardo, Fulya Akcimen, Annalisa Loizedda, Valerija Dobričić, Ivana Novaković, Vladimir S. Kostić, Clint Mizzi, Brock A. Peters, Nazli Basak, Sandro Orrù, Evangelos Kiskinis, David N. Cooper, Spyridon Gerou, Radoje Drmanac, Marina Bartsakoulia, Evangelia-Eirini Tsermpini, Georgios M. Hadjigeorgiou, Bassam R. Ali, Theodora Katsila, George P. Patrinos
Publikováno v:
Human Genomics, Vol 11, Iss 1, Pp 1-10 (2017)
Abstract Background Amyotrophic lateral sclerosis (ALS) is a devastating disease whose complex pathology has been associated with a strong genetic component in the context of both familial and sporadic disease. Herein, we adopted a next-generation se
Externí odkaz:
https://doaj.org/article/56ac508e4f8647e88e5a5eebcc04cdbd
Autor:
Karin Hellner, Fabrizio Miranda, Donatien Fotso Chedom, Sandra Herrero-Gonzalez, Daniel M. Hayden, Rick Tearle, Mara Artibani, Mohammad KaramiNejadRanjbar, Ruth Williams, Kezia Gaitskell, Samar Elorbany, Ruoyan Xu, Alex Laios, Petronela Buiga, Karim Ahmed, Sunanda Dhar, Rebecca Yu Zhang, Leticia Campo, Kevin A. Myers, María Lozano, María Ruiz-Miró, Sónia Gatius, Alba Mota, Gema Moreno-Bueno, Xavier Matias-Guiu, Javier Benítez, Lorna Witty, Gil McVean, Simon Leedham, Ian Tomlinson, Radoje Drmanac, Jean-Baptiste Cazier, Robert Klein, Kevin Dunne, Robert C. Bast Jr, Stephen H. Kennedy, Bassim Hassan, Stefano Lise, María José Garcia, Brock A. Peters, Christopher Yau, Tatjana Sauka-Spengler, Ahmed Ashour Ahmed
Publikováno v:
EBioMedicine, Vol 10, Iss C, Pp 137-149 (2016)
Current screening methods for ovarian cancer can only detect advanced disease. Earlier detection has proved difficult because the molecular precursors involved in the natural history of the disease are unknown. To identify early driver mutations in o
Externí odkaz:
https://doaj.org/article/48848af61fb0476781413217637a8181
Autor:
Radoje Drmanac
Publikováno v:
PLoS Genetics, Vol 6, Iss 8, p e1001049 (2010)
Externí odkaz:
https://doaj.org/article/81b90faff4314d1db7fe1201f2509283
Autor:
Brock A. Peters, Radoje Drmanac, John W. Park, Hope S. Rugo, Snezana Drmanac, Emily Park, Rick Tearle, Katharine Lee, Rebecca Yu Zhang, Yuxiang Li, Xingpeng Chen, Yanxiang Chen, Zhenyu Li, Serban Ciotlos, Qing Mao, Daniel M. Hayden, Jia Liu, Xuhao Luo, Misha R. Agarwal, Robert Chin, Mark Jesus M. Magbanua, Natali Gulbahce
Distribution of allele fraction of inherited and somatic variants before and after filtering. This figure is similar to Fig. 4a, but includes a plotting of all somatic variants before filtering (black), which contains a large number of false positive
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7d5568c9096d7e07789f964b7c311c05
https://doi.org/10.1158/0008-5472.22414221.v1
https://doi.org/10.1158/0008-5472.22414221.v1
Autor:
Brock A. Peters, Radoje Drmanac, John W. Park, Hope S. Rugo, Snezana Drmanac, Emily Park, Rick Tearle, Katharine Lee, Rebecca Yu Zhang, Yuxiang Li, Xingpeng Chen, Yanxiang Chen, Zhenyu Li, Serban Ciotlos, Qing Mao, Daniel M. Hayden, Jia Liu, Xuhao Luo, Misha R. Agarwal, Robert Chin, Mark Jesus M. Magbanua, Natali Gulbahce
This file contains descriptions of all of the bioinformatic analyses used in the paper.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::58a365a7eaa995fdbc9826b100b175fd
https://doi.org/10.1158/0008-5472.22414209
https://doi.org/10.1158/0008-5472.22414209
Autor:
Brock A. Peters, Radoje Drmanac, John W. Park, Hope S. Rugo, Snezana Drmanac, Emily Park, Rick Tearle, Katharine Lee, Rebecca Yu Zhang, Yuxiang Li, Xingpeng Chen, Yanxiang Chen, Zhenyu Li, Serban Ciotlos, Qing Mao, Daniel M. Hayden, Jia Liu, Xuhao Luo, Misha R. Agarwal, Robert Chin, Mark Jesus M. Magbanua, Natali Gulbahce
The following file contains Tables S1-12. The contents of these tables are referenced through the manuscript and contain the basis for the results summarized in the paper. The list of tables is as follows: S1. CNV. This table contains all the copy nu
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::32260f32c03c33f6ba686ff35f3d98f5
https://doi.org/10.1158/0008-5472.22414206
https://doi.org/10.1158/0008-5472.22414206