Zobrazeno 1 - 10
of 84
pro vyhledávání: '"R. Thane Papke"'
Autor:
Yutian Feng, Danielle Arsenault, Artemis S. Louyakis, Neta Altman-Price, Uri Gophna, R. Thane Papke, Johann Peter Gogarten
Publikováno v:
mBio, Vol 15, Iss 5 (2024)
ABSTRACTIn this study, we use pan-genomics to characterize the genomic variability of the widely dispersed halophilic archaeal species Halorubrum ezzemoulense (Hez). We include a multi-regional sampling of newly sequenced, high-quality draft genomes.
Externí odkaz:
https://doaj.org/article/a1e3c12b8c14479882ee4e2f8c2557ac
Autor:
Andrea M. Makkay, Artemis S. Louyakis, Nikhil Ram-Mohan, Uri Gophna, J. Peter Gogarten, R. Thane Papke
Publikováno v:
Scientific Reports, Vol 10, Iss 1, Pp 1-16 (2020)
Abstract Horizontal gene transfer is a means by which bacteria, archaea, and eukaryotes are able to trade DNA within and between species. While there are a variety of mechanisms through which this genetic exchange can take place, one means prevalent
Externí odkaz:
https://doaj.org/article/8c2fd9ed0dbf4cc5a0e45f10c78966ae
Autor:
Mikhail G. Pyatibratov, Alexey S. Syutkin, Tessa E. F. Quax, Tatjana N. Melnik, R. Thane Papke, Johann Peter Gogarten, Igor I. Kireev, Alexey K. Surin, Sergei N. Beznosov, Anna V. Galeva, Oleg V. Fedorov
Publikováno v:
MicrobiologyOpen, Vol 9, Iss 7, Pp n/a-n/a (2020)
Abstract Halophilic archaea from the genus Halorubrum possess two extraordinarily diverged archaellin genes, flaB1 and flaB2. To clarify roles for each archaellin, we compared two natural Halorubrum lacusprofundi strains: One of them contains both ar
Externí odkaz:
https://doaj.org/article/ee8ff836a3694731931eb296f3b5beef
Autor:
Raphaël Méheust, Andrew K. Watson, François-Joseph Lapointe, R. Thane Papke, Philippe Lopez, Eric Bapteste
Publikováno v:
Genome Biology, Vol 19, Iss 1, Pp 1-12 (2018)
Abstract Background Haloarchaea, a major group of archaea, are able to metabolize sugars and to live in oxygenated salty environments. Their physiology and lifestyle strongly contrast with that of their archaeal ancestors. Amino acid optimizations, w
Externí odkaz:
https://doaj.org/article/ea7306f12d694824896eb749cd96f731
Autor:
Rafael R. de la Haba, Paulina Corral, Cristina Sánchez-Porro, Carmen Infante-Domínguez, Andrea M. Makkay, Mohammad A. Amoozegar, Antonio Ventosa, R. Thane Papke
Publikováno v:
Frontiers in Microbiology, Vol 9 (2018)
To gain a better understanding of how divergence occurs, and how taxonomy can benefit from studying natural populations, we isolated and examined 25 closely related Halorubrum strains obtained from different hypersaline communities and compared them
Externí odkaz:
https://doaj.org/article/c14d9ceabdc246c49495977a58647c75
Autor:
R. Thane Papke, Paulina Corral, Nikhil Ram-Mohan, Rafael R. de la Haba, Cristina Sánchez-Porro, Andrea Makkay, Antonio Ventosa
Publikováno v:
Life, Vol 5, Iss 2, Pp 1405-1426 (2015)
The Halobacteria are a well-studied archaeal class and numerous investigations are showing how their diversity is distributed amongst genomes and geographic locations. Evidence indicates that recombination between species continuously facilitates the
Externí odkaz:
https://doaj.org/article/f22ad4647b4e4b5fb6573ac7e177129f
Autor:
Clara López-Hermoso, Rafael R. de la Haba, Cristina Sánchez-Porro, R. Thane Papke, Antonio Ventosa
Publikováno v:
Frontiers in Microbiology, Vol 8 (2017)
The genus Salinivibrio includes obligatory halophilic bacteria and is commonly isolated from hypersaline habitats and salted food products. They grow optimally between 7.5 and 10% salts and are facultative anaerobes. Currently, this genus comprises f
Externí odkaz:
https://doaj.org/article/460e745ba0e247da831eb2168a717d54
Publikováno v:
Life, Vol 4, Iss 4, Pp 681-715 (2014)
In hypersaline environments, haloarchaea (halophilic members of the Archaea) are the dominant organisms, and the viruses that infect them, haloarchaeoviruses are at least ten times more abundant. Since their discovery in 1974, described haloarchaeovi
Externí odkaz:
https://doaj.org/article/245374198bfd4c129ce31ffcbba3cae9
Autor:
Laurence Prunetti, Michael Graf, Ian K. Blaby, Lauri Peil, Andrea M. Makkay, Agata L. Starosta, R. Thane Papke, Tairo Oshima, Daniel N. Wilson, Valérie de Crécy-Lagard
Publikováno v:
Archaea, Vol 2016 (2016)
Translation initiation factor 5A (IF5A) is essential and highly conserved in Eukarya (eIF5A) and Archaea (aIF5A). The activity of IF5A requires hypusine, a posttranslational modification synthesized in Eukarya from the polyamine precursor spermidine.
Externí odkaz:
https://doaj.org/article/d33099df2a2d409f86c26d20b330aac3
Publikováno v:
The ISME Journal
All environments including hypersaline ones harbor measurable concentrations of dissolved extracellular DNA (eDNA) that can be utilized by microbes as a nutrient. However, it remains poorly understood which eDNA components are used, and who in a comm
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c0628252c2f15ce8ae2889259e83170c
https://doi.org/10.1038/s41396-021-00960-8
https://doi.org/10.1038/s41396-021-00960-8