Zobrazeno 1 - 10
of 44
pro vyhledávání: '"R V, Polozov"'
Publikováno v:
Biophysics. 65:426-432
This review is dedicated to the memory of Dr. Sergei L’vovich Grokhovsky, who was a distinguished scientists and experimenter; it briefly describes one aspect of his multifaceted research activity. Gro-khovsky was the first to describe the specific
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::659fffea82c9bf39136feeae088a80b0
https://doi.org/10.1134/s0006350920030082
https://doi.org/10.1134/s0006350920030082
Autor:
Iren R. Umarova, L. A. Uroshlev, R. V. Polozov, Fyodor A. Kondrashov, Il'icheva Ia, Yury D. Nechipurenko, L. A. Panchenko, Eldar T. Abdullaev, S. L. Grokhovsky
Publikováno v:
Scientific Reports, Vol 10, Iss 1, Pp 1-5 (2020)
Scientific Reports
Scientific Reports
In the course of sample preparation for Next Generation Sequencing (NGS), DNA is fragmented by various methods. Fragmentation shows a persistent bias with regard to the cleavage rates of various dinucleotides. With the exception of CpG dinucleotides
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3c950b612006561f8f5ed2533d2a8463
http://link.springer.com/article/10.1038/s41598-020-65406-1
http://link.springer.com/article/10.1038/s41598-020-65406-1
Publikováno v:
Keldysh Institute Preprints. :1-14
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::ce8747326eeb2f5e3dc40d8620bd82b1
https://doi.org/10.20948/prepr-2019-61
https://doi.org/10.20948/prepr-2019-61
Autor:
R. V. Polozov, Victor Ivanov, M.B. Kuzminsky, A.V. Dzyabchenko, Eugenia A. Boshkova, Yuri N. Chirgadze, Victor Sivozhelezov, V.A. Stepanenko
Publikováno v:
Journal of Biomolecular Structure and Dynamics. 36:3902-3915
The mouse factor Zif268, known also as early growth response protein EGR-1, is a classical representative for the Cys2His2 transcription factor family. It is required for binding the RNA polymerase with operator dsDNA to initialize the transcription
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e4c26fce84e3768b5f556595962e39fc
https://doi.org/10.1080/07391102.2017.1404937
https://doi.org/10.1080/07391102.2017.1404937
Publikováno v:
Journal of biomolecular structuredynamics. 36(3)
The analysis of temperature-induced unfolding of proteins in aqueous solutions was performed. Based on the data of thermodynamic parameters of protein unfolding and using the method of semi-empirical calculations of hydration parameters at reference
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b642dbdf35df63f03bb1bdb3ef683c21
https://pubmed.ncbi.nlm.nih.gov/28278028
https://pubmed.ncbi.nlm.nih.gov/28278028
Autor:
Yu. N. Chirgadze, R. V. Polozov, T.I. Grokhlina, Victor Ivanov, Victor Sivozhelezov, P.V. Zrelov
Publikováno v:
Physics of Particles and Nuclei Letters. 10:464-468
The analysis of amino acid-nucleotide contacts in interfaces of the protein-DNA complexes, intended to find consistencies in the protein-DNA recognition, is a complex problem that requires an analysis of the physicochemical characteristics of these c
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::cbd0834756cd8ebdb8040ed524c71bdb
https://doi.org/10.1134/s1547477113050117
https://doi.org/10.1134/s1547477113050117
Autor:
P.V. Zrelov, I. V. Bednyakov, Victor Ivanov, Yu. N. Chirgadze, R. V. Polozov, Victor Sivozhelezov, V. A. Stepanenko
Publikováno v:
Physics of Particles and Nuclei Letters. 10:457-463
Methods and algorithms to analyze surfaces of globular and fibrillar proteins, DNA, and RNA have been developed. These methods for the construction of maps of fragments of these objects in the original cylindrical projection developed herein essentia
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::833f1a0734e456befa48e2b169eb6a2f
https://doi.org/10.1134/s1547477113050038
https://doi.org/10.1134/s1547477113050038
Autor:
D. Yu. Nechipurenko, Il'icheva Ia, S. L. Grokhovsky, M. V. Golovkin, R. V. Polozov, Yu. D. Nechipurenko, L. A. Panchenko
Publikováno v:
Biophysics. 58:27-36
We investigated a phenomenon of ultrasonic cleavage of DNA complexed with transition metal cations Ag(I), Cu(II) and Hg(II). We found the statistically significant dependence of relative intensity of cleavage on cation type and concentration. Each ca
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::32bc8e15f592e0ad1fb3248422bce34d
https://doi.org/10.1134/s0006350913010065
https://doi.org/10.1134/s0006350913010065
Autor:
Yury D. Nechipurenko, Dmitry Yu. Nechipurenko, M. V. Golovkin, S. L. Grokhovsky, Il'icheva Ia, R. V. Polozov, L. A. Panchenko
Publikováno v:
Biophysical Journal. 100:117-125
We investigated the phenomenon of ultrasonic cleavage of DNA by analyzing a large set of cleavage patterns of DNA restriction fragments using polyacrylamide gel electrophoresis. The cleavage intensity of individual phosphodiester bonds was found to d
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b9ac233d4f2d5e5aed6ca6ca268b667a
https://doi.org/10.1016/j.bpj.2010.10.052
https://doi.org/10.1016/j.bpj.2010.10.052
Autor:
Mikhail Viktorovich Golovkin, R. V. Polozov, Dmitrii Yurievich Nechipurenko, Yurii Dmitrievich Nechipurenko, Il'icheva Ia, S. L. Grokhovsky, L. A. Panchenko
Publikováno v:
Компьютерные исследования и моделирование, Vol 2, Iss 4, Pp 419-428 (2010)
Recently we have developed a new method for studying DNA based on ultrasound - induced cleavage of DNA sugar-phosphate backbone. Relative cleavage rates of the phosphodiester bonds in all 16 dinucleotides have been determined. The increased amount of
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1f647d93c7ee9469b624925b4ee0a7f6
https://doi.org/10.20537/2076-7633-2010-2-4-419-428
https://doi.org/10.20537/2076-7633-2010-2-4-419-428