The ocean sampling day consortium

Autor: Kopf, A, Bicak, M, Kottmann, R, Schnetzer, J, Kostadinov, I, Lehmann, K, Fernandez-Guerra, A, Jeanthon, C, Rahav, E, Ullrich, M, Wichels, A, Gerdts, G, Polymenakou, P, Kotoulas, G, Siam, R, Abdallah, RZ, Sonnenschein, EC, Cariou, T, O'Gara, F, Jackson, S, Orlic, S, Steinke, M, Busch, J, Duarte, B, Caçador, I, Canning-Clode, J, Bobrova, O, Marteinsson, V, Reynisson, E, Loureiro, CM, Luna, GM, Quero, GM, Löscher, CR, Kremp, A, DeLorenzo, ME, Øvreås, L, Tolman, J, LaRoche, J, Penna, A, Frischer, M, Davis, T, Katherine, B, Meyer, CP, Ramos, S, Magalhães, C, Jude-Lemeilleur, F, Aguirre-Macedo, ML, Wang, S, Poulton, N, Jones, S, Collin, R, Fuhrman, JA, Conan, P, Alonso, C, Stambler, N, Goodwin, K, Yakimov, MM, Baltar, F, Bodrossy, L, Van De Kamp, J, Frampton, DMF, Ostrowski, M, Van Ruth, P, Malthouse, P, Claus, S, Deneudt, K, Mortelmans, J, Pitois, S, Wallom, D, Salter, I, Costa, R, Schroeder, DC, Kandil, MM, Amaral, V, Biancalana, F, Santana, R, Pedrotti, ML, Yoshida, T, Ogata, H, Ingleton, T, Munnik, K, Rodriguez-Ezpeleta, N, Berteaux-Lecellier, V, Wecker, P, Cancio, I, Vaulot, D, Bienhold, C, Ghazal, H, Chaouni, B, Essayeh, S, Ettamimi, S, Zaid, EH, Boukhatem, N, Bouali, A, Chahboune, R, Barrijal, S, Timinouni, M, El Otmani, F, Bennani, M, Mea, M

Publikováno v: GigaScience, vol 4, iss 1

© 2015 Kopf et al. Ocean Sampling Day was initiated by the EU-funded Micro B3 (Marine Microbial Biodiversity, Bioinformatics, Biotechnology) project to obtain a snapshot of the marine microbial biodiversity and function of the world's oceans. It is

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::382582fa35cb35153047320c6cf2e40b
https://escholarship.org/uc/item/52g4t251

The Ocean Sampling Day Consortium

Autor: Oleksandra Bobrova, Petra ten Hoopen, Rodrigo Costa, Rania Siam, Rehab Z. Abdallah, Jorge A. Herrera Silveira, Catarina Magalhães, Nedime Serakinci, Marie E. DeLorenzo, Riccardo Rosselli, Paul Malthouse, Lise Øvreås, Eyjólfur Reynisson, Susan Gebbels, Francesca Malfatti, Frank Oliver Glöckner, Federico M. Lauro, Hans Erik Karlsen, David Wallom, Christian Jeanthon, Mark J. Costello, Fergal O'Gara, Nadezhda Todorova, Ana C. Costa, Monia El Bour, Paul D. van Ruth, Ivaylo Kostadinov, Martin Ostrowski, Jed A. Fuhrman, Viggo Marteinsson, Thierry Cariou, Hiroyuki Ogata, Maria Luiza Pedrotti, Emilie Villar, Federico Baltar, Sandi Orlić, Valentina Turk, Katja Lehmann, Dawn Field, Renzo Kottmann, Florence Jude-Lemeilleur, Daniel Vaulot, Alessandro Vezzi, Neil M Davies, Mahrous M. Kandil, Véronique Berteaux-Lecellier, Christopher D. Sinigalliano, Timothy W. Davis, Peter N. Golyshin, Stéphane L'Haridon, Jonathan A. Martinez, Sandra Ramos, Pascal Conan, Ma. Leopoldina Aguirre-Macedo, Antonio Fernandez-Guerra, Soumya Essayeh, Clara Loureiro, Edvardsen Bente, Noureddine Boukhatem, Rachelle M. Jensen, Sophie Pitois, Bouchra Chaouni, Kate Munnik, Anke Kremp, Stephane Pesant, Roberto Danovaro, Cecilia Alonso, Said Barrijal, Jodie van de Kamp, Michail M. Yakimov, Nicole J. Poulton, Zackary I. Johnson, Adriana Zingone, Bernardo Duarte, Ilkay Salihoglu, Paraskevi N. Polymenakou, Jack A. Gilbert, Melody S. Clark, Ian Salter, Hassan Ghazal, Julie LaRoche, J. Mortelmans, Ranjith Edirisinghe, Grazia Marina Quero, Dion Matthew Frederick Frampton, Isabel Caçador, Georgios Tsiamis, Declan C. Schroeder, Jamie Hinks, Ana Martins, Noga Stambler, Rachel Collin, João Canning-Clode, Tinkara Tinta, Mesude Bicak, Scott Jones, Valentina Amaral, Matthias S. Ullrich, Gunnar Gerdts, Klaas Deneudt, Michael Steinke, Mohamed Bennani, Rafael Santana, Fabio De Pascale, Jennifer Tolman, Juan Iriberri, Levente Bodrossy, Abderrahim Bouali, Antonella Penna, Bruno Cataletto, Josep M. Gasol, Florencia Biancalana, Maribeth L. Gidley, Stephen A. Jackson, Mahmut Cerkez Ergoren, Carolin R. Löscher, Antje Wichels, Ventzislav Karamfilov, R. Eric Collins, Sara Ettamimi, Riccardo Schiavon, Mohammed Timinouni, Christina Bienhold, Julia Schnetzer, Marc E. Frischer, Wayne J. Fuller, Simon Claus, Ibon Cancio, Guy Cochrane, Patrick Martin, Gian Marco Luna, Snejana Moncheva, Linda A. Amaral-Zettler, Eva C. Sonnenschein, Paul Anders Fronth Nyhus, Shiao Y. Wang, Antonina Dos Santos, Eyal Rahav, Eileen Bresnan, Anna Kopf, Barker Katherine, Michèle Barbier, Naiara Rodríguez-Ezpeleta, Kemal Can Bizsel, Tim Ingleton, Patricia Wecker, Julia A. Busch, Kelly D. Goodwin, El Houcine Zaid, Rajaa Chahboune, Takashi Yoshida, Fatima El Otmani, Marianna Mea, Nina Dzhembekova, Anne-Lise Ducluzeau, Christopher P. Meyer, Georgios Kotoulas

Publikováno v: GigaScience
GigaScience, 2015, 4 (1), pp.27. ⟨10.1186/s13742-015-0066-5⟩
Repositório Científico de Acesso Aberto de Portugal
Repositório Científico de Acesso Aberto de Portugal (RCAAP)
instacron:RCAAP
Addi. Archivo Digital para la Docencia y la Investigación
instname
Giga science 4 (2015). doi:10.1186/s13742-015-0066-5
info:cnr-pdr/source/autori:Kopf, Anna; Bicak, Mesude; Kottmann, Renzo; Schnetzer, Julia; Kostadinov, Ivaylo; Lehmann, Katja; Fernandez-Guerra, Antonio; Jeanthon, Christian; Rahav, Eyal; Ullrich, Matthias; Wichels, Antje; Gerdts, Gunnar; Polymenakou, Paraskevi; Kotoulas, Giorgos; Siam, Rania; Abdallah, Rehab Z.; Sonnenschein, Eva C.; Cariou, Thierry; O'Gara, Fergal; Jackson, Stephen; Orlic, Sandi; Steinke, Michael; Busch, Julia; Duarte, Bernardo; Cacador, Isabel; Canning-Clode, Joao; Bobrova, Oleksandra; Marteinsson, Viggo; Reynisson, Eyjolfur; Loureiro, Clara Magalhaes; Luna, Gian Marco; Quero, Grazia Marina; Loescher, Carolin R.; Kremp, Anke; DeLorenzo, Marie E.; Ovreas, Lise; Tolman, Jennifer; LaRoche, Julie; Penna, Antonella; Frischer, Marc; Davis, Timothy; Katherine, Barker; Meyer, Christopher P.; Ramos, Sandra; Magalhaes, Catarina; Jude-Lemeilleur, Florence; Leopoldina Aguirre-Macedo, Ma; Wang, Shiao; Poulton, Nicole; Jones, Scott; Collin, Rachel; Fuhrman, Jed A.; Conan, Pascal; Alonso, Cecilia; Stambler, Noga; Goodwin, Kelly; Yakimov, Michael M.; Baltar, Federico; Bodrossy, Levente; Van De Kamp, Jodie; Frampton, Dion M. F.; Ostrowski, Martin; Van Ruth, Paul; Malthouse, Paul; Claus, Simon; Deneudt, Klaas; Mortelmans, Jonas; Pitois, Sophie; Wallom, David; Salter, Ian; Costa, Rodrigo; Schroeder, Declan C.; Kandil, Mahrous M.; Amaral, Valentina; Biancalana, Florencia; Santana, Rafael; Pedrotti, Maria Luiza; Yoshida, Takashi; Ogata, Hiroyuki; Ingleton, Tim; Munnik, Kate; Rodriguez-Ezpeleta, Naiara; Berteaux-Lecellier, Veronique; Wecker, Patricia; Cancio, Ibon; Vaulot, Daniel; Bienhold, Christina; Ghazal, Hassan; Chaouni, Bouchra; Essayeh, Soumya; Ettamimi, Sara; Zaid, El Houcine; Boukhatem, Noureddine; Bouali, Abderrahim; Chahboune, Rajaa; Barrijal, Said; Timinouni, Mohammed; El Otmani, Fatima; Bennani, Mohamed; Mea, Marianna; Todorova, Nadezhda; Karamfilov, Ventzislav; ten Hoopen, Petra; Cochrane, Guy; L'Haridon, Stephane; Bizsel, Kemal Can; Vezzi, Alessandro; Lauro, Federico M.; Martin, Patrick; Jensen, Rachelle M.; Hinks, Jamie; Gebbels, Susan; Rosselli, Riccardo; De Pascale, Fabio; Schiavon, Riccardo; dos Santos, Antonina; Villar, Emilie; Pesant, Stephane; Cataletto, Bruno; Malfatti, Francesca; Edirisinghe, Ranjith; Silveira, Jorge A. Herrera; Barbier, Michele; Turk, Valentina; Tinta, Tinkara; Fuller, Wayne J.; Salihoglu, Ilkay; Serakinci, Nedime; Ergoren, Mahmut Cerkez; Bresnan, Eileen; Iriberri, Juan; Nyhus, Paul Anders Fronth; Bente, Edvardsen; Karlsen, Hans Erik; Golyshin, Peter N.; Gasol, Josep M.; Moncheva, Snejana; Dzhembekova, Nina; Johnson, Zackary; Sinigalliano, Christopher David; Gidley, Maribeth Louise; Zingone, Adriana; Danovaro, Roberto; Tsiamis, George; Clark, Melody S.; Costa, Ana Cristina; El Bour, Monia; Martins, Ana M.; Collins, R. Eric; Ducluzeau, Anne-Lise; Martinez, Jonathan; Costello, Mark J.; Amaral-Zettler, Linda A.; Gilbert, Jack A.; Davies, Neil; Field, Dawn; Gloeckner, Frank Oliver/titolo:The ocean sampling day consortium/doi:10.1186%2Fs13742-015-0066-5/rivista:Giga science/anno:2015/pagina_da:/pagina_a:/intervallo_pagine:/volume:4
GigaScience, 4 (1). Art.Nr. 27.
Kopf, A, Bicak, M, Kottmann, R, Schnetzer, J, Kostadinov, I, Lehmann, K, Fernandez-Guerra, A, Jeanthon, C, Rahav, E, Ullrich, M, Sonnenschein, E & Jackson, S 2015, ' The ocean sampling day consortium ', GigaScience, vol. 4, no. 27 . https://doi.org/10.1186/s13742-015-0066-5
Digital.CSIC. Repositorio Institucional del CSIC
Gigascience (2047-217X) (Biomed Central Ltd), 2015-06, Vol. 4, N. 1, P. 1-5
GigaScience, BioMed Central, 2015, 4 (1), pp.27. ⟨10.1186/s13742-015-0066-5⟩

Kopf, Anna ... et. al.-- 5 pages, 1 figure.-- This manuscript is NOAA-GLERL contribution number 1763
Ocean Sampling Day was initiated by the EU-funded Micro B3 (Marine Microbial Biodiversity, Bioinformatics, Biotechnology) project to obtain a sn

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f3b29de7b9a6c99a4c6fb55bdd0ea815
https://hdl.handle.net/11576/2630657

Age and environment are the main drivers shaping the wild common sole (Solea solea) microbiota.

Autor: Basili M; Alma Mater Studiorum-University of Bologna, Bologna, Italy.; Institute for Marine Biological Resources and Biotechnologies, National Research Council (CNR-IRBIM), Ancona, Italy., Sabatini L; Institute for Marine Biological Resources and Biotechnologies, National Research Council (CNR-IRBIM), Ancona, Italy.; Department of Life and Environmental Sciences, Polytechnic University of Marche, Ancona, Italy., Pellini G; Institute for Marine Biological Resources and Biotechnologies, National Research Council (CNR-IRBIM), Ancona, Italy., Massaccesi N; Alma Mater Studiorum-University of Bologna, Bologna, Italy.; Institute for Marine Biological Resources and Biotechnologies, National Research Council (CNR-IRBIM), Ancona, Italy., Manini E; Institute for Marine Biological Resources and Biotechnologies, National Research Council (CNR-IRBIM), Ancona, Italy.; National Bioaffiliationersity Future Center (NBFC), Palermo, 90133, Italy., Donato F; Institute for Marine Biological Resources and Biotechnologies, National Research Council (CNR-IRBIM), Ancona, Italy., Scarcella G; Institute for Marine Biological Resources and Biotechnologies, National Research Council (CNR-IRBIM), Ancona, Italy.; National Bioaffiliationersity Future Center (NBFC), Palermo, 90133, Italy., Luna GM; Institute for Marine Biological Resources and Biotechnologies, National Research Council (CNR-IRBIM), Ancona, Italy.; National Bioaffiliationersity Future Center (NBFC), Palermo, 90133, Italy., Quero GM; Institute for Marine Biological Resources and Biotechnologies, National Research Council (CNR-IRBIM), Ancona, Italy. grazia.quero@irbim.cnr.it.; National Bioaffiliationersity Future Center (NBFC), Palermo, 90133, Italy. grazia.quero@irbim.cnr.it.

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Accelerated nitrogen cycling on Mediterranean seagrass leaves at volcanic CO 2 vents.

Autor: Berlinghof J; Department of Integrative Marine Ecology, Stazione Zoologica Anton Dohrn - National Institute of Marine Biology, Ecology and Biotechnology, Naples, Italy. johber@uni-bremen.de.; Department of Marine Ecology, University of Bremen, Bremen, Germany. johber@uni-bremen.de.; Genoa Marine Centre, Stazione Zoologica Anton Dohrn - National Institute of Marine Biology, Ecology and Biotechnology, Genova, Italy. johber@uni-bremen.de., Montilla LM; Department of Integrative Marine Ecology, Stazione Zoologica Anton Dohrn - National Institute of Marine Biology, Ecology and Biotechnology, Naples, Italy., Peiffer F; Department of Integrative Marine Ecology, Stazione Zoologica Anton Dohrn - National Institute of Marine Biology, Ecology and Biotechnology, Naples, Italy.; Department of Marine Ecology, University of Bremen, Bremen, Germany., Quero GM; Institute for Marine Biological Resources and Biotechnology, National Research Council (CNR), Ancona, Italy., Marzocchi U; Department of Integrative Marine Ecology, Stazione Zoologica Anton Dohrn - National Institute of Marine Biology, Ecology and Biotechnology, Naples, Italy.; Center for water technology (WATEC), Department of Biology, Aarhus University, Aarhus, Denmark., Meador TB; Biology Centre of the Czech Academy of Sciences, České Budějovice, Czech Republic.; Department of Ecosystem Biology, Faculty of Science, University of South Bohemia, České Budějovice, Czech Republic., Margiotta F; Department of Research Infrastructures for marine biological resources, Stazione Zoologica Anton Dohrn - National Institute of Marine Biology, Ecology and Biotechnology, Naples, Italy., Abagnale M; Department of Research Infrastructures for marine biological resources, Stazione Zoologica Anton Dohrn - National Institute of Marine Biology, Ecology and Biotechnology, Naples, Italy., Wild C; Department of Marine Ecology, University of Bremen, Bremen, Germany., Cardini U; Department of Integrative Marine Ecology, Stazione Zoologica Anton Dohrn - National Institute of Marine Biology, Ecology and Biotechnology, Naples, Italy. ulisse.cardini@szn.it.; Genoa Marine Centre, Stazione Zoologica Anton Dohrn - National Institute of Marine Biology, Ecology and Biotechnology, Genova, Italy. ulisse.cardini@szn.it.

Publikováno v: Communications biology [Commun Biol] 2024 Mar 19; Vol. 7 (1), pp. 341. Date of Electronic Publication: 2024 Mar 19.

Inter-comparison of marine microbiome sampling protocols.

Autor: Pascoal F; Interdisciplinary Centre of Marine and Environmental Research, University of Porto, Terminal de Cruzeiros do Porto de Leixões, Av. General Norton de Matos s/n, 4450-208, Porto, Portugal.; Departamento de Biologia, Faculdade de Ciências, Universidade do Porto, rua do Campo Alegre s/n, 4169- 007, Porto, Portugal., Tomasino MP; Interdisciplinary Centre of Marine and Environmental Research, University of Porto, Terminal de Cruzeiros do Porto de Leixões, Av. General Norton de Matos s/n, 4450-208, Porto, Portugal., Piredda R; Integrative Marine Ecology Department, Stazione Zoologica Anton Dohrn, Naples, Italy., Quero GM; Institute for Biological Resources and Marine Biotechnologies, National Research Council (IRBIM-CNR), Largo Fiera della Pesca 2, 60125, Ancona, Italy., Torgo L; Faculty of Computer Science, Dalhousie University, Halifax, NS, Canada., Poulain J; Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, 2 Rue Gaston Crémieux, 91057, Evry, France., Galand PE; Sorbonne Université, CNRS, Laboratoire d'Écogéochimie des Environnements Benthiques (LECOB), Observatoire Océanologique de Banyuls, Banyuls-sur-Mer, France., Fuhrman JA; Marine & Environmental Biology, Department of Biological Sciences, University of Southern California (USC), Los Angeles, CA, USA., Mitchell A; EMBL's European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridgeshire, CB10 1SD, UK., Tinta T; National Institute of Biology, Marine Biology Station Piran, Piran, Slovenia., Turk Dermastia T; National Institute of Biology, Marine Biology Station Piran, Piran, Slovenia., Fernandez-Guerra A; Lundbeck Foundation GeoGenetics Centre, GLOBE Institute, University of Copenhagen, Copenhagen, Denmark., Vezzi A; Department of Biology, University of Padua, Via U. Bassi 58/B, 35131, Padua, Italy., Logares R; Institute of Marine Sciences (ICM), CSIC. Passeig Marítim de la Barceloneta, 37-49, ES08003, Barcelona, Spain., Malfatti F; Department of Life Sciences, University of Trieste, Trieste, Italy., Endo H; Bioinformatics Center, Institute for Chemical Research, Kyoto University, Gokasho, Uji, Japan., Dąbrowska AM; Department of Marine Ecology, Institute of Oceanology Polish Academy of Sciences, Sopot, Poland., De Pascale F; Department of Biology, University of Padua, Via U. Bassi 58/B, 35131, Padua, Italy., Sánchez P; Institute of Marine Sciences (ICM), CSIC. Passeig Marítim de la Barceloneta, 37-49, ES08003, Barcelona, Spain., Henry N; Sorbonne Université, CNRS, Station Biologique de Roscoff, AD2M ECOMAP, UMR 7144, Roscoff, France.; CNRS, FR2424, ABiMS, Station Biologique de Roscoff, Sorbonne Université, Roscoff, France., Fosso B; Department of Biosciences, Biotechnologies and Environment, University of Bari, 70126, Bari, Italy., Wilson B; Department of Biology, John Krebs Field Station, University of Oxford, Wytham, OX2 8QJ, UK., Toshchakov S; Kurchatov Center for Genome Research, Moscow, Russia., Ferrant GK; Rannsóknir og nýsköpun/Research & Innovation, Matís, Reykjavík, Iceland., Grigorov I; Technical University of Denmark, National Institute of Aquatic Resources, Kgs. Lyngby, Denmark., Vieira FRJ; Départment de Biologie, École Normale Supérieure, Paris, France., Costa R; Department of Bioengineering, Instituto Superior Técnico, University of Lisbon, Av. Rovisco Pais, 1049-001, Lisbon, Portugal.; Institute for Bioengineering and Biosciences (iBB) and i4HB-Institute for Health and Bioeconomy, Instituto Superior Técnico, University of Lisbon, Av. Rovisco Pais, 1049-001, Lisbon, Portugal., Pesant S; EMBL's European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridgeshire, CB10 1SD, UK. pesant@ebi.ac.uk., Magalhães C; Interdisciplinary Centre of Marine and Environmental Research, University of Porto, Terminal de Cruzeiros do Porto de Leixões, Av. General Norton de Matos s/n, 4450-208, Porto, Portugal. catarinamagalhaes1972@gmail.com.; Departamento de Biologia, Faculdade de Ciências, Universidade do Porto, rua do Campo Alegre s/n, 4169- 007, Porto, Portugal. catarinamagalhaes1972@gmail.com.

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