Gap-free telomere-to-telomere haplotype assembly of the tomato hind (Cephalopholis sonnerati)

Autor: Sheng Lu, Yang Liu, Ming Li, Qijin Ge, Chongwei Wang, Yu Song, Bo Zhou, Songlin Chen

Publikováno v: Scientific Data, Vol 11, Iss 1, Pp 1-10 (2024)

Abstract The tomato hind (Cephalopholis sonnerati) is an emerging economically important grouper in recent years. With the increasing maturity of sequencing technologies and assembly methodologies, a higher quality reference genome has become both ac

Externí odkaz: https://doaj.org/article/2e8affa1d2494977ad1c46765d5d1f66

Horizontal gene transfer and symbiotic microorganisms regulate the adaptive evolution of intertidal algae, Porphyra sense lato

Autor: Wenlei Wang, Qijin Ge, Jian Wen, Han Zhang, Yanling Guo, Zongtang Li, Yan Xu, Dehua Ji, Changsheng Chen, Lidong Guo, Mengyang Xu, Chengcheng Shi, Guangyi Fan, Chaotian Xie

Publikováno v: Communications Biology, Vol 7, Iss 1, Pp 1-13 (2024)

Abstract Intertidal algae may adapt to environmental challenges by acquiring genes from other organisms and relying on symbiotic microorganisms. Here, we obtained a symbiont-free and chromosome-level genome of Pyropia haitanensis (47.2 Mb), a type of

Externí odkaz: https://doaj.org/article/f0f31fcce30545f789a6ef4ea1c21846

Draft Genomes and Comparative Analysis of Seven Mangrove Rhizosphere-Associated Fungi Isolated From Kandelia obovata and Acanthus ilicifolius

Autor: Chengcheng Shi, Jianwei Chen, Qijin Ge, Jiahui Sun, Wenjie Guo, Jie Wang, Ling Peng, Qiwu Xu, Guangyi Fan, Wenwei Zhang, Xin Liu

Publikováno v: Frontiers in Fungal Biology, Vol 2 (2021)

Mangroves are one of the most productive and biologically diverse ecosystems, with unique plants, animals, and microorganisms adapted to the harsh coastal environments. Although fungi are widely distributed in the mangrove ecosystem and they are play

Externí odkaz: https://doaj.org/article/2aef4d7e01224182896fb3552d1600c5

The complete chloroplast genome of a shrub species, Smilax glabra (Smilacaceae) from Guangdong, China

Autor: Zhang Yi, Chengcheng Shi, Ying Liu, Kai Han, Qijin Ge, Xin Liu

Publikováno v: Mitochondrial DNA. Part B, Resources
article-version (VoR) Version of Record

Smilax glabra is a perennial woody scandent shrub, of which the dried aerial tuber has been used as Chinese medicine. Here, we sequenced S. glabra and assembled its complete chloroplast (cp) genome. The genome is 157,889 bp in length and has a typica

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6e3c3322c40cff49a54ef32915716eb4
https://doi.org/10.1080/23802359.2021.1979431

Horizontal gene transfer and symbiotic microorganisms regulate the adaptive evolution of intertidal algae, Porphyra sense lato.

Autor: Wang, Wenlei^1,2,3 (AUTHOR), Ge, Qijin⁴ (AUTHOR), Wen, Jian^1,2 (AUTHOR), Zhang, Han^1,2 (AUTHOR), Guo, Yanling^1,2 (AUTHOR), Li, Zongtang^1,2 (AUTHOR), Xu, Yan^1,2 (AUTHOR), Ji, Dehua^1,2 (AUTHOR), Chen, Changsheng^1,2 (AUTHOR), Guo, Lidong⁴ (AUTHOR), Xu, Mengyang⁴ (AUTHOR), Shi, Chengcheng^4,5 (AUTHOR), Fan, Guangyi^4,5,6 (AUTHOR) fanguangyi@genomics.cn, Xie, Chaotian^1,2,3 (AUTHOR) ctxie@jmu.edu.cn

Publikováno v: Communications Biology. 8/11/2024, Vol. 7 Issue 1, p1-13. 13p.