Single gene insertion drives bioalcohol production by a thermophilic archaeon

Autor: Basen, Mirko, Schut, Gerrit J., Nguyen, Diep M., Lipscomb, Gina L., Benn, Robert A., Prybol, Cameron J., Vaccaro, Brian J., Poole, Farris L, Kelly, Robert M., Adams, Michael W. W.

Publikováno v: Proceedings of the National Academy of Sciences of the United States of America, 2014 Dec 01. 111(49), 17618-17623.

Externí odkaz: https://www.jstor.org/stable/43278728

Enhancing reproducibility in scientific computing: Metrics and registry for Singularity containers.

Autor: Sochat, Vanessa V.¹ vsochat@stanford.edu, Prybol, Cameron J.², Kurtzer, Gregory M.³

Publikováno v: PLoS ONE. 11/29/2017, Vol. 12 Issue 11, p1-24. 24p.

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Identification of rare-disease genes using blood transcriptome sequencing and large control cohorts.

Autor: Frésard L; Department of Pathology, School of Medicine, Stanford University, Stanford, CA, USA. lfresard@stanford.edu., Smail C; Biomedical Informatics Program, Stanford University, Stanford, CA, USA., Ferraro NM; Biomedical Informatics Program, Stanford University, Stanford, CA, USA., Teran NA; Department of Genetics, School of Medicine, Stanford University, Stanford, CA, USA., Li X; Department of Pathology, School of Medicine, Stanford University, Stanford, CA, USA., Smith KS; Department of Pathology, School of Medicine, Stanford University, Stanford, CA, USA., Bonner D; Stanford Center for Undiagnosed Diseases, Stanford University, Stanford, CA, USA., Kernohan KD; Newborn Screening Ontario (NSO), Children's Hospital of Eastern Ontario, Ottawa, Ontario, Canada., Marwaha S; Stanford Center for Undiagnosed Diseases, Stanford University, Stanford, CA, USA.; Stanford Cardiovascular Institute, School of Medicine, Stanford University, Stanford, CA, USA., Zappala Z; Department of Genetics, School of Medicine, Stanford University, Stanford, CA, USA., Balliu B; Department of Pathology, School of Medicine, Stanford University, Stanford, CA, USA., Davis JR; Department of Genetics, School of Medicine, Stanford University, Stanford, CA, USA., Liu B; Department of Biology, School of Humanities and Sciences, Stanford University, Stanford, CA, USA., Prybol CJ; Department of Genetics, School of Medicine, Stanford University, Stanford, CA, USA., Kohler JN; Stanford Center for Undiagnosed Diseases, Stanford University, Stanford, CA, USA., Zastrow DB; Stanford Center for Undiagnosed Diseases, Stanford University, Stanford, CA, USA., Reuter CM; Stanford Center for Undiagnosed Diseases, Stanford University, Stanford, CA, USA., Fisk DG; Stanford Medicine Clinical Genomics Program, School of Medicine, Stanford University, Stanford, CA, USA., Grove ME; Stanford Medicine Clinical Genomics Program, School of Medicine, Stanford University, Stanford, CA, USA., Davidson JM; Stanford Center for Undiagnosed Diseases, Stanford University, Stanford, CA, USA., Hartley T; Children's Hospital of Eastern Ontario Research Institute, University of Ottawa, Ottawa, Ontario, Canada., Joshi R; Stanford Medicine Clinical Genomics Program, School of Medicine, Stanford University, Stanford, CA, USA., Strober BJ; Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD, USA., Utiramerur S; Stanford Medicine Clinical Genomics Program, School of Medicine, Stanford University, Stanford, CA, USA., Lind L; Department of Medical Sciences, Cardiovascular Epidemiology, Uppsala University, Uppsala, Sweden., Ingelsson E; Stanford Cardiovascular Institute, School of Medicine, Stanford University, Stanford, CA, USA.; Department of Medicine, Division of Cardiovascular Medicine, School of Medicine, Stanford University, Stanford, CA, USA., Battle A; Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD, USA.; Department of Computer Science, Johns Hopkins University, Baltimore, MD, USA., Bejerano G; Department of Computer Science, Stanford University, Stanford, CA, USA.; Department of Pediatrics, School of Medicine, Stanford University, Stanford, CA, USA.; Department of Developmental Biology, School of Medicine, Stanford University, Stanford, CA, USA.; Department of Biomedical Data Science, School of Medicine, Stanford University, Stanford, CA, USA., Bernstein JA; Department of Pediatrics, School of Medicine, Stanford University, Stanford, CA, USA., Ashley EA; Department of Genetics, School of Medicine, Stanford University, Stanford, CA, USA.; Stanford Center for Undiagnosed Diseases, Stanford University, Stanford, CA, USA.; Department of Medicine, Division of Cardiovascular Medicine, School of Medicine, Stanford University, Stanford, CA, USA., Boycott KM; Children's Hospital of Eastern Ontario Research Institute, University of Ottawa, Ottawa, Ontario, Canada., Merker JD; Department of Pathology, School of Medicine, Stanford University, Stanford, CA, USA.; Stanford Medicine Clinical Genomics Program, School of Medicine, Stanford University, Stanford, CA, USA.; Departments of Pathology and Laboratory Medicine & Genetics, Lineberger Comprehensive Cancer Center, University of North Carolina School Medicine, Chapel Hill, NC, USA., Wheeler MT; Stanford Center for Undiagnosed Diseases, Stanford University, Stanford, CA, USA.; Stanford Cardiovascular Institute, School of Medicine, Stanford University, Stanford, CA, USA., Montgomery SB; Department of Pathology, School of Medicine, Stanford University, Stanford, CA, USA. smontgom@stanford.edu.; Department of Genetics, School of Medicine, Stanford University, Stanford, CA, USA. smontgom@stanford.edu.

Publikováno v: Nature medicine [Nat Med] 2019 Jun; Vol. 25 (6), pp. 911-919. Date of Electronic Publication: 2019 Jun 03.