Výsledky vyhledávání - "Proteins/classification"

IDEAS: individual level differential expression analysis for single-cell RNA-seq data

Autor: Mengqi Zhang, Si Liu, Zhen Miao, Fang Han, Raphael Gottardo, Wei Sun

Publikováno v: Genome biology, vol. 23, no. 1, pp. 33
Genome Biology
Genome Biology, Vol 23, Iss 1, Pp 1-17 (2022)

We consider an increasingly popular study design where single-cell RNA-seq data are collected from multiple individuals and the question of interest is to find genes that are differentially expressed between two groups of individuals. Towards this en

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::666268c88da7466180a0a291811f9313
https://serval.unil.ch/resource/serval:BIB_B48AF13F6F91.P001/REF.pdf

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A/T/N: An unbiased descriptive classification scheme for Alzheimer disease biomarkers

Autor: Giovanni B. Frisoni, Keith A. Johnson, Kaj Blennow, Maria C. Carrillo, William J. Jagust, Howard Feldman, Clifford R. Jack, Bruno Dubois, Harald Hampel, Reisa A. Sperling, David S. Knopman, David A. Bennett, Philip Scheltens, Ronald C. Petersen

Publikováno v: Neurology, Vol. 87, No 5 (2016) pp. 539-47
Jack, CR; Bennett, DA; Blennow, K; Carrillo, MC; Feldman, HH; Frisoni, GB; et al.(2016). A/T/N: An unbiased descriptive classification scheme for Alzheimer disease biomarkers. Neurology, 87(5), 539-547. doi: 10.1212/WNL.0000000000002923. UC San Diego: Retrieved from: http://www.escholarship.org/uc/item/1bp768ws
Neurology
Jack, C R J, Bennett, D A, Blennow, K, Carrillo, M C, Feldman, H H, Frisoni, G B, Hampel, H, Jagust, W J, Johnson, K A, Knopman, D S, Petersen, R C, Scheltens, P, Sperling, R A & Dubois, B 2016, ' A/T/N: An unbiased descriptive classification scheme for Alzheimer disease biomarkers ', Neurology, vol. 87, no. 5, pp. 539-547 .
Neurology, 87(5), 539-547. Lippincott Williams and Wilkins

© 2016 American Academy of Neurology. Biomarkers have become an essential component of Alzheimer disease (AD) research and because of the pervasiveness of AD pathology in the elderly, the same biomarkers are used in cognitive aging research. A numbe

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c363a333f1e6aef750eb0cba7ad36584
https://doi.org/10.1212/wnl.0000000000002923

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A DNA barcode reference library for Swiss butterflies and forester moths as a tool for species identification, systematics and conservation

Autor: Emmanuel Wermeille, Yves Gonseth, Christophe J. Praz, Sarah Schmid, Markus Fluri, Sofia Wyler, Thomas Stalling, Yannick Chittaro, Jessica R. Litman, Stefan Birrer

Publikováno v: PLoS ONE
PLoS ONE, Vol 13, Iss 12, p e0208639 (2018)
PloS one, vol. 13, no. 12, pp. e0208639

Butterfly monitoring and Red List programs in Switzerland rely on a combination of observations and collection records to document changes in species distributions through time. While most butterflies can be identified using morphology, some taxa rem

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::95f036311f62d823cf8762309c370e51
http://europepmc.org/articles/PMC6303096

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DisProt 7.0: a major update of the database of disordered proteins

The Database of Protein Disorder (DisProt, URL: www.disprot.org) has been significantly updated and upgraded since its last major renewal in 2007. The current release holds information on more than 800 entries of IDPs/IDRs, i.e. intrinsically disorde

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=od______3848::285e78babca55e03ba5143ea3be4bbf2
https://doi.org/10.1093/nar/gkw1279

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Zebrafish Plzf transcription factors enhance early type I IFN response induced by two non-enveloped RNA viruses

Autor: Christelle Langevin, Valérie Briolat, Armel Houel, Elina Aleksejeva, Jean-Pierre Levraud, Pierre Boudinot

Publikováno v: Developmental and Comparative Immunology
Developmental and Comparative Immunology, Elsevier, 2016, 57, pp.48-56. ⟨10.1016/j.dci.2015.12.016⟩
Developmental and Comparative Immunology, 2016, 57, pp.48-56. ⟨10.1016/j.dci.2015.12.016⟩

International audience; The BTB-POZ transcription factor Promyelocytic Leukemia Zinc Finger (PLZF, or ZBTB16) has been recently identified as a major factor regulating the induction of a subset of Interferon stimulated genes in human and mouse. We sh

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::10bb84df8a1cba345ba16f607072ea5a
https://hal-pasteur.archives-ouvertes.fr/pasteur-02558296

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Diversity of bacterial type II toxin–antitoxin systems: a comprehensive search and functional analysis of novel families

Autor: Julien Guglielmini, Raphaël Leplae, Régis Hallez, Pierre-Alexandre Drèze, Damien Geeraerts, Laurence Van Melderen

Publikováno v: Nucleic Acids Research
Nucleic acids research, 39 (13
Nucleic Acids Research, Oxford University Press, 2011, 39 (13), pp.5513-5525. ⟨10.1093/nar/gkr131⟩

Type II toxin-antitoxin (TA) systems are generally composed of two genes organized in an operon, encoding a labile antitoxin and a stable toxin. They were first discovered on plasmids where they contribute to plasmid stability by a phenomenon denoted

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0816836cbda8fe1c427ff4489b8f33de
http://europepmc.org/articles/PMC3141249

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Selectome: a database of positive selection

Autor: Estelle Proux, Sébastien Moretti, Romain A. Studer, Marc Robinson-Rechavi

Publikováno v: Nucleic Acids Research
Nucleic Acids Research, vol. 37, no. Database issue, pp. D404-D407

Genome wide scans have shown that positive selection is relatively frequent at the molecular level. It is of special interest to identify which protein sites and which phylogenetic branches are affected. We present Selectome, a database which provide

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8a17c8c6e8de536c5ee3eab441626d4c
http://europepmc.org/articles/PMC2686563

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The YqfN protein of Bacillus subtilis is the tRNA: m 1 A22 methyltransferase (TrmK)

Autor: Karolina L. Tkaczuk, Louis Droogmans, Daniel Gigot, Janusz Marek Bujnicki, Martine Roovers, Katarzyna H Kaminska

Publikováno v: Nucleic Acids Research
Nucleic acids research, 36 (10

N(1)-methylation of adenosine to m(1)A occurs in several different positions in tRNAs from various organisms. A methyl group at position N(1) prevents Watson-Crick-type base pairing by adenosine and is therefore important for regulation of structure

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e4c83ccc3a6bff9e48e687fd7605221f
https://doi.org/10.1093/nar/gkn169

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GenoList: an integrated environment for comparative analysis of microbial genomes

Autor: Sandrine Rousseau, Ivan Moszer, Pierre Lechat, Laurence Hummel

Publikováno v: Nucleic Acids Research
Nucleic Acids Research, Oxford University Press, 2007, DataBase, 36 (Supp. 1), pp.D469-D474. ⟨10.1093/nar/gkm1042⟩
Nucleic Acids Research, 2007, DataBase, 36 (Supp. 1), pp.D469-D474. ⟨10.1093/nar/gkm1042⟩

International audience; The multitude of bacterial genome sequences being determined has generated new requirements regarding the development of databases and graphical interfaces: these are needed to organize and retrieve biological information from

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d2131b7c62960dd28f983ed88d3bc226
https://doi.org/10.1093/nar/gkm1042

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