A revamped rat reference genome improves the discovery of genetic diversity in laboratory rats

Autor: de Jong, Tristan V., Pan, Yanchao, Rastas, Pasi, Munro, Daniel, Tutaj, Monika, Akil, Huda, Benner, Chris, Chen, Denghui, Chitre, Apurva S., Chow, William, Colonna, Vincenza, Dalgard, Clifton L., Demos, Wendy M., Doris, Peter A., Garrison, Erik, Geurts, Aron M., Gunturkun, Hakan M., Guryev, Victor, Hourlier, Thibaut, Howe, Kerstin, Huang, Jun, Kalbfleisch, Ted, Kim, Panjun, Li, Ling, Mahaffey, Spencer, Martin, Fergal J., Mohammadi, Pejman, Ozel, Ayse Bilge, Polesskaya, Oksana, Pravenec, Michal, Prins, Pjotr, Sebat, Jonathan, Smith, Jennifer R., Solberg Woods, Leah C., Tabakoff, Boris, Tracey, Alan, Uliano-Silva, Marcela, Villani, Flavia, Wang, Hongyang, Sharp, Burt M., Telese, Francesca, Jiang, Zhihua, Saba, Laura, Wang, Xusheng, Murphy, Terence D., Palmer, Abraham A., Kwitek, Anne E., Dwinell, Melinda R., Williams, Robert W., Li, Jun Z., Chen, Hao

Publikováno v: In Cell Genomics 10 April 2024 4(4)

Identification of imprinted genes subject to parent-of-origin specific expression in Arabidopsis thaliana seeds

Autor: Wennblom Trevor J, Lao Nga, Comte Aurélie, Duszynska Dorota, Fort Antoine, Donoghue Mark TA, Schmid Marc W, Wolff Philip, Prins Pjotr, Laouielle-Duprat Sylvia, McKeown Peter C, Smant Geert, Köhler Claudia, Grossniklaus Ueli, Spillane Charles

Publikováno v: BMC Plant Biology, Vol 11, Iss 1, p 113 (2011)

Abstract Background Epigenetic regulation of gene dosage by genomic imprinting of some autosomal genes facilitates normal reproductive development in both mammals and flowering plants. While many imprinted genes have been identified and intensively s

Externí odkaz: https://doaj.org/article/487514d8f5d94c08919496851f852ad0

Pan-conserved segment tags identify ultra-conserved sequences across assemblies in the human pangenome

Autor: Liao, Wen-Wei, Asri, Mobin, Ebler, Jana, Doerr, Daniel, Haukness, Marina, Hickey, Glenn, Lu, Shuangjia, Lucas, Julian K., Monlong, Jean, Abel, Haley J., Buonaiuto, Silvia, Chang, Xian H., Cheng, Haoyu, Chu, Justin, Colonna, Vincenza, Eizenga, Jordan M., Feng, Xiaowen, Fischer, Christian, Fulton, Robert S., Garg, Shilpa, Groza, Cristian, Guarracino, Andrea, Harvey, William T., Heumos, Simon, Howe, Kerstin, Jain, Miten, Lu, Tsung-Yu, Markello, Charles, Martin, Fergal J., Mitchell, Matthew W., Munson, Katherine M., Mwaniki, Moses Njagi, Novak, Adam M., Olsen, Hugh E., Pesout, Trevor, Porubsky, David, Prins, Pjotr, Sibbesen, Jonas A., Tomlinson, Chad, Villani, Flavia, Vollger, Mitchell R., Antonacci-Fulton, Lucinda L., Baid, Gunjan, Baker, Carl A., Belyaeva, Anastasiya, Billis, Konstantinos, Carroll, Andrew, Chang, Pi-Chuan, Cody, Sarah, Cook, Daniel E., Cornejo, Omar E., Diekhans, Mark, Ebert, Peter, Fairley, Susan, Fedrigo, Olivier, Felsenfeld, Adam L., Formenti, Giulio, Frankish, Adam, Gao, Yan, Giron, Carlos Garcia, Green, Richard E., Haggerty, Leanne, Hoekzema, Kendra, Hourlier, Thibaut, Ji, Hanlee P., Kolesnikov, Alexey, Korbel, Jan O., Kordosky, Jennifer, Lee, HoJoon, Lewis, Alexandra P., Magalhães, Hugo, Marco-Sola, Santiago, Marijon, Pierre, McDaniel, Jennifer, Mountcastle, Jacquelyn, Nattestad, Maria, Olson, Nathan D., Puiu, Daniela, Regier, Allison A., Rhie, Arang, Sacco, Samuel, Sanders, Ashley D., Schneider, Valerie A., Schultz, Baergen I., Shafin, Kishwar, Sirén, Jouni, Smith, Michael W., Sofia, Heidi J., Abou Tayoun, Ahmad N., Thibaud-Nissen, Françoise, Tricomi, Francesca Floriana, Wagner, Justin, Wood, Jonathan M.D., Zimin, Aleksey V., Popejoy, Alice B., Bourque, Guillaume, Chaisson, Mark J.P., Flicek, Paul, Phillippy, Adam M., Zook, Justin M., Eichler, Evan E., Haussler, David, Jarvis, Erich D., Miga, Karen H., Wang, Ting, Garrison, Erik, Marschall, Tobias, Hall, Ira, Li, Heng, Paten, Benedict, Greer, Stephanie U., Pavlichin, Dmitri S., Zhou, Bo, Urban, Alexander E., Weissman, Tsachy

Publikováno v: In Cell Reports Methods 28 August 2023 3(8)

A systems genetics approach delineates the role of Bcl2 in leukemia pathogenesis

Autor: Wang, Xinfeng, Bajpai, Akhilesh Kumar, Gu, Qingqing, Centeno, Arthur, Starlard-Davenport, Athena, Prins, Pjotr, Xu, Fuyi, Lu, Lu

Publikováno v: In Leukemia Research March 2022 114

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