Zobrazeno 1 - 6
of 6
pro vyhledávání: '"Prashansa Ratan"'
Autor:
Prashansa Ratan, Liudmilla Rubbi, Michael Thompson, Kaushik Naresh, Jolena Waddell, Barbara Jones, Matteo Pellegrini
Publikováno v:
Epigenetics, Vol 18, Iss 1 (2023)
DNA methylation has proven to be the most promising age-predictive biomarker in mammals resulting in the emergence of ‘epigenetic clocks’ that describe the relationship between methylation levels and age. Using Targeted bisulfite Sequencing, we e
Externí odkaz:
https://doaj.org/article/cad0b7fdfe734dd0a79b00ba4802e9e8
Autor:
Liudmilla Rubbi, Haoxuan Zhang, Junxi Feng, Christopher He, Patrick Kurnia, Prashansa Ratan, Aakash Tammana, Sabina House, Michael Thompson, Colin Farrell, Sagi Snir, Daniel Stahler, Elaine A. Ostrander, Bridgett M. vonHoldt, Matteo Pellegrini
Publikováno v:
Epigenetics, Vol 17, Iss 11, Pp 1497-1512 (2022)
Unlike genomes, which are static throughout the lifespan of an organism, DNA methylomes are dynamic. To study these dynamics, we developed quantitative models that measure the effect of multiple factors on DNA methylomes including, age, sex, weight,
Externí odkaz:
https://doaj.org/article/41c57f9c128b4033838660025f3248c2
Autor:
Pablo Porras, Elisabet Barrera, Alan Bridge, Noemi del-Toro, Gianni Cesareni, Margaret Duesbury, Henning Hermjakob, Marta Iannuccelli, Igor Jurisica, Max Kotlyar, Luana Licata, Ruth C. Lovering, David J. Lynn, Birgit Meldal, Bindu Nanduri, Kalpana Paneerselvam, Simona Panni, Chiara Pastrello, Matteo Pellegrini, Livia Perfetto, Negin Rahimzadeh, Prashansa Ratan, Sylvie Ricard-Blum, Lukasz Salwinski, Gautam Shirodkar, Anjalia Shrivastava, Sandra Orchard
Publikováno v:
Nature Communications, Vol 11, Iss 1, Pp 1-12 (2020)
The IMEx consortium provides one of the largest resources of curated, experimentally verified molecular interaction data. Here, the authors review how IMEx evolved into a fundamental resource for life scientists and describe how IMEx data can support
Externí odkaz:
https://doaj.org/article/1dcc4fce40a042d9b98ea3d25e21c5d2
Autor:
Marta Iannuccelli, Juri Rappsilber, Matteo Pellegrini, Gautam Shirodkar, Colin W. Combe, Pablo Porras, Maria Jesus Martin, Eliot Ragueneau, Anjali Shrivastava, Livia Perfetto, Margaret Duesbury, Sangya Pundir, Xavier Watkins, Lukasz Salwinski, Sandra Orchard, Sylvain D. Vallet, Bálint Mészáros, Luana Licata, Simona Panni, Karyn How, Prashansa Ratan, Gianni Cesareni, Kalpana Panneerselvam, Odilia Lu, Henning Hermjakob, Sylvie Ricard-Blum, Elisabet Barrera, Noemi del Toro, Birgit H M Meldal
Publikováno v:
del Toro, N, Shrivastava, A, Ragueneau, E, Meldal, B, Combe, C, Barrera, E, Perfetto, L, How, K, Ratan, P, Shirodkar, G, Lu, O, Mészáros, B, Watkins, X, Pundir, S, Licata, L, Iannuccelli, M, Pellegrini, M, Martin, M J, Panni, S, Duesbury, M, Vallet, S D, Rappsilber, J, Ricard-Blum, S, Cesareni, G, Salwinski, L, Orchard, S, Porras, P, Panneerselvam, K & Hermjakob, H 2021, ' The IntAct database : Efficient access to fine-grained molecular interaction data ', Nucleic Acids Research, vol. 50, no. D1, pp. D648-D653 . https://doi.org/10.1093/nar/gkab1006
Nucleic Acids Research
Nucleic Acids Research, vol 50, iss D1
Nucleic Acids Research
Nucleic Acids Research, vol 50, iss D1
The IntAct molecular interaction database (https://www.ebi.ac.uk/intact) is a curated resource of molecular interactions, derived from the scientific literature and from direct data depositions. As of August 2021, IntAct provides more than one millio
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bf456c7abad01c6b8254885ffe621e6f
https://doi.org/10.1093/nar/gkab1006
https://doi.org/10.1093/nar/gkab1006
Autor:
Matteo Pellegrini, Aakash Tammana, Liudmilla Rubbi, Daniel R. Stahler, Patrick Kurnia, Prashansa Ratan, Haoxuan Zhang, Elaine A. Ostrander, Junxi Feng, Christopher He, Bridgett M. vonHoldt, Michael Thompson
Unlike genomes, which are static throughout the lifespan of an organism, DNA methylomes are dynamic. To study these dynamics we developed quantitative models that measure the effect of multiple factors on DNA methylomes including, age, sex, weight an
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::2940e1fc8120322cc4e4cd97b20a5136
https://doi.org/10.1101/2021.10.05.463246
https://doi.org/10.1101/2021.10.05.463246
Autor:
Max Kotlyar, Gianni Cesareni, Sylvie Ricard-Blum, Alan Bridge, Igor Jurisica, Gautam Shirodkar, Marta Iannuccelli, David J. Lynn, Lukasz Salwinski, Elisabet Barrera, Simona Panni, Kalpana Paneerselvam, Henning Hermjakob, Matteo Pellegrini, Chiara Pastrello, Sandra Orchard, Negin Rahimzadeh, Livia Perfetto, Prashansa Ratan, Ruth C. Lovering, Margaret Duesbury, Noemi del-Toro, Anjalia Shrivastava, Bindu Nanduri, Birgit H M Meldal, Luana Licata, Pablo Porras
Publikováno v:
Nature Communications
Nature Communications, Vol 11, Iss 1, Pp 1-12 (2020)
Nature Communications, Vol 11, Iss 1, Pp 1-12 (2020)
The International Molecular Exchange (IMEx) Consortium provides scientists with a single body of experimentally verified protein interactions curated in rich contextual detail to an internationally agreed standard. In this update to the work of the I
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fab7895a5179f6493bc13d53f6197135
https://doi.org/10.1038/s41467-020-19942-z
https://doi.org/10.1038/s41467-020-19942-z