A multi-platform draft de novo genome assembly and comparative analysis for the Scarlet Macaw (Ara macao).

Autor: Christopher M Seabury, Scot E Dowd, Paul M Seabury, Terje Raudsepp, Donald J Brightsmith, Poul Liboriussen, Yvette Halley, Colleen A Fisher, Elaine Owens, Ganesh Viswanathan, Ian R Tizard

Publikováno v: PLoS ONE, Vol 8, Iss 5, p e62415 (2013)

Data deposition to NCBI Genomes: This Whole Genome Shotgun project has been deposited at DDBJ/EMBL/GenBank under the accession AMXX00000000 (SMACv1.0, unscaffolded genome assembly). The version described in this paper is the first version (AMXX010000

Externí odkaz: https://doaj.org/article/4d47f077c8e64818a839f246f2a50eed

Large Scale Identification and Categorization of Protein Sequences Using Structured Logistic Regression

Autor: Carsten Wiuf, Poul Nissen, Poul Liboriussen, Christian N. S. Pedersen, Bjørn Panyella Pedersen, Kristian B. Axelsen, Michael G. Palmgren, Georgiana Ifrim

Publikováno v: Pedersen, B P, Ifrim, G, Liboriussen, P, Axelsen, K B, Palmgren, M G, Nissen, P, Wiuf, C H & Pedersen, C N S 2014, ' Large Scale Identification and Categorization of Protein Sequences Using Structured Logistic Regression ', P L o S One, vol. 9, no. 1, e85139 . https://doi.org/10.1371/journal.pone.0085139
Pedersen, B P, Ifrim, G, Liboriussen, P, Axelsen, K B, Palmgren, M B, Nissen, P, Wiuf, C H & Pedersen, C N S 2014, ' Large scale identification and categorization of protein sequences using structured logistic regression ', PLOS ONE, vol. 9, no. 1, e85139 . https://doi.org/10.1371/journal.pone.0085139
PLoS ONE, Vol 9, Iss 1, p e85139 (2014)
PLoS ONE

BackgroundStructured Logistic Regression (SLR) is a newly developed machine learning tool first proposed in the context of text categorization. Current availability of extensive protein sequence databases calls for an automated method to reliably cla

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::74a7015fa3aa8e53a0210d9e2102e546
https://pure.au.dk/portal/da/publications/large-scale-identification-and-categorization-of-protein-sequences-using-structured-logistic-regression(d7432d84-bfca-445a-b091-b535661e0042).html

Dissection of symbiosis and organ development by integrated transcriptome analysis of lotus japonicus mutant and wild-type plants

Autor: Simona Radutoiu, V. A. Voroshilova, Leif Schauser, Nicolas Goffard, Satoshi Tabata, Georg F. Weiller, Michael K. Udvardi, Niels Høgslund, Shusei Sato, Diego H. Sanchez, Felix Lippold, Thomas Ott, Gitte Vestergaard Lohmann, Poul Liboriussen, Lene Krusell, Jens Stougaard, Matthew A. Hannah

Publikováno v: Høgslund, N, Radutoiu, S, Krusell, L, Voroshilova, V, Hannah, M A, Goffard, N, Sanchez, D H, Lippold, F, Ott, T, Sato, S, Tabata, S, Liboriussen, P, Lohmann, G V, Schauser, L, Weiller, G F, Udvardi, M K & Stougaard, J 2009, ' Dissection of symbiosis and organ development by integrated transcriptome analysis of lotus japonicus mutant and wild-type plants ', P L o S One, vol. 4, no. 8, pp. e6556 . https://doi.org/10.1371/journal.pone.0006556
PLoS ONE, Vol 4, Iss 8, p e6556 (2009)
PLoS ONE

Udgivelsesdato: 2009 Genetic analyses of plant symbiotic mutants has led to the identification of key genes involved in Rhizobium-legume communication as well as in development and function of nitrogen fixing root nodules. However, the impact of thes

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9743bcc49a029aad329e7a9bf418f757
https://pure.au.dk/portal/da/publications/dissection-of-symbiosis-and-organ-development-by-integrated-transcriptome-analysis-of-lotus-japonicus-mutant-and-wildtype-plants(b4abbc30-a1e5-11de-a092-000ea68e967b).html