CANDy: Automated analysis of domain architectures in carbohydrate-active enzymes.

Autor: Windels A; Department of Biotechnology, Centre for Synthetic Biology (CSB), Ghent University, Ghent, Belgium., Franceus J; Department of Biotechnology, Centre for Synthetic Biology (CSB), Ghent University, Ghent, Belgium., Pleiss J; Institute of Biochemistry and Technical Biochemistry, University of Stuttgart, Stuttgart, Germany., Desmet T; Department of Biotechnology, Centre for Synthetic Biology (CSB), Ghent University, Ghent, Belgium.

Publikováno v: PloS one [PLoS One] 2024 Jul 11; Vol. 19 (7), pp. e0306410. Date of Electronic Publication: 2024 Jul 11 (Print Publication: 2024).

EnzymeML: seamless data flow and modeling of enzymatic data.

Autor: Lauterbach S; Institute of Biochemistry and Technical Biochemistry, University of Stuttgart, Stuttgart, Germany., Dienhart H; Institute of Biochemistry and Technical Biochemistry, University of Stuttgart, Stuttgart, Germany., Range J; Institute of Biochemistry and Technical Biochemistry, University of Stuttgart, Stuttgart, Germany., Malzacher S; Institute of Bio- and Geosciences 1, Forschungszentrum Jülich, Jülich, Germany.; Aachen Biology and Biotechnology, RWTH Aachen University, Aachen, Germany., Spöring JD; Institute of Bio- and Geosciences 1, Forschungszentrum Jülich, Jülich, Germany.; Aachen Biology and Biotechnology, RWTH Aachen University, Aachen, Germany., Rother D; Institute of Bio- and Geosciences 1, Forschungszentrum Jülich, Jülich, Germany.; Aachen Biology and Biotechnology, RWTH Aachen University, Aachen, Germany., Pinto MF; i3S, Instituto de Investigação e Inovação em Saúde da Universidade do Porto, University of Porto, Porto, Portugal., Martins P; i3S, Instituto de Investigação e Inovação em Saúde da Universidade do Porto, University of Porto, Porto, Portugal., Lagerman CE; School of Chemical and Biomolecular Engineering, Georgia Institute of Technology, Atlanta, GA, USA., Bommarius AS; School of Chemical and Biomolecular Engineering, Georgia Institute of Technology, Atlanta, GA, USA., Høst AV; Department of Chemical and Biochemical Engineering, Technical University of Denmark, Kgs Lyngby, Denmark., Woodley JM; Department of Chemical and Biochemical Engineering, Technical University of Denmark, Kgs Lyngby, Denmark., Ngubane S; Department of Biotechnology and Food Science, Durban University of Technology, Durban, South Africa., Kudanga T; Department of Biotechnology and Food Science, Durban University of Technology, Durban, South Africa., Bergmann FT; BioQUANT/COS, Heidelberg University, Heidelberg, Germany., Rohwer JM; Department of Biochemistry, Stellenbosch University, Stellenbosch, South Africa., Iglezakis D; Information and Communication Center, University of Stuttgart, Stuttgart, Germany., Weidemann A; Heidelberg Institute for Theoretical Studies, Heidelberg, Germany., Wittig U; Heidelberg Institute for Theoretical Studies, Heidelberg, Germany., Kettner C; Beilstein-Institut, Frankfurt am Main, Germany., Swainston N; Institute of Systems, Molecular and Integrative Biology, University of Liverpool, Liverpool, UK., Schnell S; Department of Biological Sciences and Department of Applied and Computational Mathematics and Statistics, University of Notre Dame, Notre Dame, IN, USA., Pleiss J; Institute of Biochemistry and Technical Biochemistry, University of Stuttgart, Stuttgart, Germany. Juergen.Pleiss@itb.uni-stuttgart.de.

Publikováno v: Nature methods [Nat Methods] 2023 Mar; Vol. 20 (3), pp. 400-402. Date of Electronic Publication: 2023 Feb 09.

The effect of mutations near the T1 copper site on the biochemical characteristics of the small laccase from Streptomyces coelicolor A3(2)

Autor: Prins, A., Kleinsmidt, L., Khan, N., Kirby, B., Kudanga, T., Vollmer, J., Pleiss, J., Burton, S., Le Roes-Hill, M.

Publikováno v: In Enzyme and Microbial Technology January 2015 68:23-32

Plastics degradation by hydrolytic enzymes: The plastics-active enzymes database-PAZy.

Autor: Buchholz PCF; Institute of Biochemistry and Technical Biochemistry, University of Stuttgart, Stuttgart, Germany., Feuerriegel G; Department of Microbiology and Biotechnology, University of Hamburg, Hamburg, Germany., Zhang H; Department of Microbiology and Biotechnology, University of Hamburg, Hamburg, Germany., Perez-Garcia P; Department of Microbiology and Biotechnology, University of Hamburg, Hamburg, Germany., Nover LL; Department of Microbiology and Biotechnology, University of Hamburg, Hamburg, Germany., Chow J; Department of Microbiology and Biotechnology, University of Hamburg, Hamburg, Germany., Streit WR; Department of Microbiology and Biotechnology, University of Hamburg, Hamburg, Germany., Pleiss J; Institute of Biochemistry and Technical Biochemistry, University of Stuttgart, Stuttgart, Germany.

Publikováno v: Proteins [Proteins] 2022 Jul; Vol. 90 (7), pp. 1443-1456. Date of Electronic Publication: 2022 Feb 25.

The GH19 Engineering Database: Sequence diversity, substrate scope, and evolution in glycoside hydrolase family 19

Autor: Orlando M., Buchholz P. C. F., Lotti M., Pleiss J.

Publikováno v: PLoS ONE
PLoS ONE, Vol 16, Iss 10 (2021)

The glycoside hydrolase 19 (GH19) is a bifunctional family of chitinases and endolysins, which have been studied for the control of plant fungal pests, the recycle of chitin biomass, and the treatment of multi-drug resistant bacteria. The GH19 domain

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=pmid_dedup__::1edeb4a5f87bdc254b2e86ffd3dd62d2
http://europepmc.org/articles/PMC8547705